RNA–Protein interactions for RNA: ENST00000463644.5

MECP2-207, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 1,088 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-207ENST00000463644 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
MECP2-207ENST00000463644 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
MECP2-207ENST00000463644 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
MECP2-207ENST00000463644 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
MECP2-207ENST00000463644 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
MECP2-207ENST00000463644 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
MECP2-207ENST00000463644 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
MECP2-207ENST00000463644 IQGAP1P46940 1657 aa17.28■□□□□ 0.36
MECP2-207ENST00000463644 TMEM131LA2VDJ0 1609 aa17.28■□□□□ 0.36
MECP2-207ENST00000463644 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
MECP2-207ENST00000463644 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
MECP2-207ENST00000463644 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
MECP2-207ENST00000463644 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
MECP2-207ENST00000463644 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
MECP2-207ENST00000463644 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
MECP2-207ENST00000463644 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
MECP2-207ENST00000463644 TRPM2O94759 1503 aa17.22■□□□□ 0.35
MECP2-207ENST00000463644 RAB3GAP2Q9H2M9 1393 aa17.22■□□□□ 0.35
MECP2-207ENST00000463644 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
MECP2-207ENST00000463644 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
MECP2-207ENST00000463644 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
MECP2-207ENST00000463644 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
MECP2-207ENST00000463644 CPS1P31327 1500 aa17.19■□□□□ 0.34
MECP2-207ENST00000463644 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
MECP2-207ENST00000463644 BCANQ96GW7 911 aa17.18■□□□□ 0.34
MECP2-207ENST00000463644 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
MECP2-207ENST00000463644 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
MECP2-207ENST00000463644 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
MECP2-207ENST00000463644 HRCP23327 699 aa17.16■□□□□ 0.34
MECP2-207ENST00000463644 STRCP1A6NGW2 1772 aa17.14■□□□□ 0.33
MECP2-207ENST00000463644 KIF1BO60333 1816 aa17.14■□□□□ 0.33
MECP2-207ENST00000463644 KCNA6P17658 529 aa17.12■□□□□ 0.33
MECP2-207ENST00000463644 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
MECP2-207ENST00000463644 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
MECP2-207ENST00000463644 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
MECP2-207ENST00000463644 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
MECP2-207ENST00000463644 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
MECP2-207ENST00000463644 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
MECP2-207ENST00000463644 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
MECP2-207ENST00000463644 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
MECP2-207ENST00000463644 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
MECP2-207ENST00000463644 TOM1O60784 492 aa17.05■□□□□ 0.32
MECP2-207ENST00000463644 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
MECP2-207ENST00000463644 SPATA31E1Q6ZUB1 1445 aa17.04■□□□□ 0.32
MECP2-207ENST00000463644 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
MECP2-207ENST00000463644 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
MECP2-207ENST00000463644 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
MECP2-207ENST00000463644 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
MECP2-207ENST00000463644 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
MECP2-207ENST00000463644 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
MECP2-207ENST00000463644 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
MECP2-207ENST00000463644 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
MECP2-207ENST00000463644 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.32
MECP2-207ENST00000463644 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
MECP2-207ENST00000463644 PPLO60437 1756 aa17■□□□□ 0.31
MECP2-207ENST00000463644 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
MECP2-207ENST00000463644 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
MECP2-207ENST00000463644 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
MECP2-207ENST00000463644 METP08581 1390 aa16.99■□□□□ 0.31
MECP2-207ENST00000463644 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
MECP2-207ENST00000463644 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
MECP2-207ENST00000463644 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
MECP2-207ENST00000463644 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.31
MECP2-207ENST00000463644 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
MECP2-207ENST00000463644 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
MECP2-207ENST00000463644 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
MECP2-207ENST00000463644 MSH6P52701 1360 aa16.92■□□□□ 0.3
MECP2-207ENST00000463644 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
MECP2-207ENST00000463644 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
MECP2-207ENST00000463644 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
MECP2-207ENST00000463644 MYOM2P54296 1465 aa16.89■□□□□ 0.29
MECP2-207ENST00000463644 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
MECP2-207ENST00000463644 HSPA1LP34931 641 aa16.88■□□□□ 0.29
MECP2-207ENST00000463644 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
MECP2-207ENST00000463644 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
MECP2-207ENST00000463644 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
MECP2-207ENST00000463644 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
MECP2-207ENST00000463644 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
MECP2-207ENST00000463644 ATF3P18847 181 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
MECP2-207ENST00000463644 TMEM132EQ6IEE7 984 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 STAC3Q96MF2 364 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
MECP2-207ENST00000463644 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
MECP2-207ENST00000463644 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
MECP2-207ENST00000463644 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
MECP2-207ENST00000463644 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
MECP2-207ENST00000463644 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
MECP2-207ENST00000463644 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
MECP2-207ENST00000463644 STK26Q9P289 416 aa16.82■□□□□ 0.28
MECP2-207ENST00000463644 DCCP43146 1447 aa16.81■□□□□ 0.28
MECP2-207ENST00000463644 ADGRL3Q9HAR2 1447 aa16.81■□□□□ 0.28
MECP2-207ENST00000463644 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
MECP2-207ENST00000463644 TECPR2O15040 1411 aa16.8■□□□□ 0.28
MECP2-207ENST00000463644 ROBO1Q9Y6N7 1651 aa16.8■□□□□ 0.28
MECP2-207ENST00000463644 LAMC1P11047 1609 aa16.8■□□□□ 0.28
MECP2-207ENST00000463644 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms