RNA–Protein interactions for RNA: ENST00000463644.5

MECP2-207, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 1,088 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-207ENST00000463644 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
MECP2-207ENST00000463644 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
MECP2-207ENST00000463644 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.7
MECP2-207ENST00000463644 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
MECP2-207ENST00000463644 ABCC9O60706 1549 aa24.6■■□□□ 1.53
MECP2-207ENST00000463644 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
MECP2-207ENST00000463644 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
MECP2-207ENST00000463644 NACADO15069 1562 aa23.58■■□□□ 1.37
MECP2-207ENST00000463644 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
MECP2-207ENST00000463644 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
MECP2-207ENST00000463644 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
MECP2-207ENST00000463644 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
MECP2-207ENST00000463644 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
MECP2-207ENST00000463644 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
MECP2-207ENST00000463644 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
MECP2-207ENST00000463644 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
MECP2-207ENST00000463644 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
MECP2-207ENST00000463644 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
MECP2-207ENST00000463644 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
MECP2-207ENST00000463644 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
MECP2-207ENST00000463644 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
MECP2-207ENST00000463644 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
MECP2-207ENST00000463644 FOXD1Q16676 465 aa22.02■■□□□ 1.12
MECP2-207ENST00000463644 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
MECP2-207ENST00000463644 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
MECP2-207ENST00000463644 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
MECP2-207ENST00000463644 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
MECP2-207ENST00000463644 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
MECP2-207ENST00000463644 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
MECP2-207ENST00000463644 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
MECP2-207ENST00000463644 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
MECP2-207ENST00000463644 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
MECP2-207ENST00000463644 WIZO95785 1651 aa21.47■■□□□ 1.03
MECP2-207ENST00000463644 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
MECP2-207ENST00000463644 NESP48681 1621 aa21.27■■□□□ 1
MECP2-207ENST00000463644 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
MECP2-207ENST00000463644 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
MECP2-207ENST00000463644 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
MECP2-207ENST00000463644 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
MECP2-207ENST00000463644 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
MECP2-207ENST00000463644 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
MECP2-207ENST00000463644 CUX2O14529 1486 aa21■□□□□ 0.95
MECP2-207ENST00000463644 CFTRP13569 1480 aa21■□□□□ 0.95
MECP2-207ENST00000463644 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
MECP2-207ENST00000463644 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
MECP2-207ENST00000463644 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
MECP2-207ENST00000463644 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
MECP2-207ENST00000463644 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
MECP2-207ENST00000463644 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
MECP2-207ENST00000463644 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
MECP2-207ENST00000463644 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
MECP2-207ENST00000463644 WDR62O43379 1518 aa20.78■□□□□ 0.92
MECP2-207ENST00000463644 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
MECP2-207ENST00000463644 MSH5O43196 834 aa20.63■□□□□ 0.89
MECP2-207ENST00000463644 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
MECP2-207ENST00000463644 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
MECP2-207ENST00000463644 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
MECP2-207ENST00000463644 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
MECP2-207ENST00000463644 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
MECP2-207ENST00000463644 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
MECP2-207ENST00000463644 CUX1P39880 1505 aa20.37■□□□□ 0.85
MECP2-207ENST00000463644 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
MECP2-207ENST00000463644 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
MECP2-207ENST00000463644 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
MECP2-207ENST00000463644 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
MECP2-207ENST00000463644 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
MECP2-207ENST00000463644 SOGA1O94964 1423 aa20.3■□□□□ 0.84
MECP2-207ENST00000463644 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
MECP2-207ENST00000463644 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
MECP2-207ENST00000463644 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
MECP2-207ENST00000463644 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
MECP2-207ENST00000463644 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
MECP2-207ENST00000463644 ADRA2BP18089 450 aa20.22■□□□□ 0.83
MECP2-207ENST00000463644 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
MECP2-207ENST00000463644 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
MECP2-207ENST00000463644 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
MECP2-207ENST00000463644 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
MECP2-207ENST00000463644 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
MECP2-207ENST00000463644 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
MECP2-207ENST00000463644 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
MECP2-207ENST00000463644 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
MECP2-207ENST00000463644 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
MECP2-207ENST00000463644 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
MECP2-207ENST00000463644 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
MECP2-207ENST00000463644 FBLN2P98095 1184 aa20.02■□□□□ 0.8
MECP2-207ENST00000463644 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
MECP2-207ENST00000463644 CHD1O14646 1710 aa19.99■□□□□ 0.79
MECP2-207ENST00000463644 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
MECP2-207ENST00000463644 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
MECP2-207ENST00000463644 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
MECP2-207ENST00000463644 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
MECP2-207ENST00000463644 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
MECP2-207ENST00000463644 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.76
MECP2-207ENST00000463644 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
MECP2-207ENST00000463644 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
MECP2-207ENST00000463644 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
MECP2-207ENST00000463644 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
MECP2-207ENST00000463644 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
MECP2-207ENST00000463644 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
MECP2-207ENST00000463644 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms