RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 RGL3Q3MIN7 710 aa29.64■■■□□ 2.34
NUP43-205ENST00000463048 PPP1R15AO75807 674 aaPredicted RBP29.62■■■□□ 2.33
NUP43-205ENST00000463048 SCAF11Q99590 1463 aaKnown RBP29.61■■■□□ 2.33
NUP43-205ENST00000463048 NEURL4Q96JN8 1562 aa29.61■■■□□ 2.33
NUP43-205ENST00000463048 BCANQ96GW7 911 aa29.59■■■□□ 2.33
NUP43-205ENST00000463048 ZFYVE9O95405 1425 aa29.58■■■□□ 2.33
NUP43-205ENST00000463048 NPHP4O75161 1426 aaPredicted RBP29.57■■■□□ 2.32
NUP43-205ENST00000463048 DMRT2Q9Y5R5 561 aa29.56■■■□□ 2.32
NUP43-205ENST00000463048 SPATA31E1Q6ZUB1 1445 aa29.54■■■□□ 2.32
NUP43-205ENST00000463048 HDGFP51858 240 aaKnown RBP29.54■■■□□ 2.32
NUP43-205ENST00000463048 SIN3AQ96ST3 1273 aa29.54■■■□□ 2.32
NUP43-205ENST00000463048 IQGAP1P46940 1657 aa29.53■■■□□ 2.32
NUP43-205ENST00000463048 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.53■■■□□ 2.32
NUP43-205ENST00000463048 NEXMIFQ5QGS0 1516 aa29.52■■■□□ 2.32
NUP43-205ENST00000463048 NEUROD1Q13562 356 aa29.52■■■□□ 2.32
NUP43-205ENST00000463048 MED14O60244 1454 aa29.5■■■□□ 2.31
NUP43-205ENST00000463048 SLC26A8Q96RN1 970 aa29.48■■■□□ 2.31
NUP43-205ENST00000463048 PPLO60437 1756 aa29.47■■■□□ 2.31
NUP43-205ENST00000463048 RPGRIP1LQ68CZ1 1315 aa29.45■■■□□ 2.3
NUP43-205ENST00000463048 PLEKHG1Q9ULL1 1385 aa29.44■■■□□ 2.3
NUP43-205ENST00000463048 KDM2AQ9Y2K7 1162 aa29.42■■■□□ 2.3
NUP43-205ENST00000463048 VGFO15240 615 aaPredicted RBP29.41■■■□□ 2.3
NUP43-205ENST00000463048 IFT172Q9UG01 1749 aa29.41■■■□□ 2.3
NUP43-205ENST00000463048 CCER1Q8TC90 406 aaPredicted RBP29.4■■■□□ 2.3
NUP43-205ENST00000463048 ZNF335Q9H4Z2 1342 aaPredicted RBP29.4■■■□□ 2.3
NUP43-205ENST00000463048 DCAF11Q8TEB1 546 aa29.39■■■□□ 2.3
NUP43-205ENST00000463048 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
NUP43-205ENST00000463048 ADAMTS13Q76LX8 1427 aa29.34■■■□□ 2.29
NUP43-205ENST00000463048 NRXN3Q9Y4C0 1643 aa29.34■■■□□ 2.29
NUP43-205ENST00000463048 SETBP1Q9Y6X0 1596 aa29.31■■■□□ 2.28
NUP43-205ENST00000463048 L3MBTL2Q969R5 705 aa29.29■■■□□ 2.28
NUP43-205ENST00000463048 TBX22Q9Y458 520 aa29.28■■■□□ 2.28
NUP43-205ENST00000463048 MYOM2P54296 1465 aa29.27■■■□□ 2.28
NUP43-205ENST00000463048 STRCP1A6NGW2 1772 aa29.26■■■□□ 2.27
NUP43-205ENST00000463048 DIP2AQ14689 1571 aa29.26■■■□□ 2.27
NUP43-205ENST00000463048 ALKQ9UM73 1620 aa29.25■■■□□ 2.27
NUP43-205ENST00000463048 METP08581 1390 aa29.24■■■□□ 2.27
NUP43-205ENST00000463048 TONSLQ96HA7 1378 aa29.24■■■□□ 2.27
NUP43-205ENST00000463048 PIK3C2GO75747 1445 aa29.23■■■□□ 2.27
NUP43-205ENST00000463048 LTBP4Q8N2S1 1624 aa29.23■■■□□ 2.27
NUP43-205ENST00000463048 CFAP70Q5T0N1 1121 aa29.21■■■□□ 2.27
NUP43-205ENST00000463048 NRXN1Q9ULB1 1477 aa29.2■■■□□ 2.26
NUP43-205ENST00000463048 SETD1AO15047 1707 aaKnown RBP29.2■■■□□ 2.26
NUP43-205ENST00000463048 KCNA6P17658 529 aa29.19■■■□□ 2.26
NUP43-205ENST00000463048 CHD2O14647 1828 aaKnown RBP29.18■■■□□ 2.26
NUP43-205ENST00000463048 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
NUP43-205ENST00000463048 RBM33Q96EV2 1170 aaKnown RBP29.18■■■□□ 2.26
NUP43-205ENST00000463048 PTPRUQ92729 1446 aa29.18■■■□□ 2.26
NUP43-205ENST00000463048 AMOTL2Q9Y2J4 779 aa29.17■■■□□ 2.26
NUP43-205ENST00000463048 CLSPNQ9HAW4 1339 aa29.16■■■□□ 2.26
NUP43-205ENST00000463048 C14orf93Q9H972 538 aaKnown RBP29.14■■■□□ 2.26
NUP43-205ENST00000463048 STK26Q9P289 416 aa29.14■■■□□ 2.26
NUP43-205ENST00000463048 CPS1P31327 1500 aa29.14■■■□□ 2.25
NUP43-205ENST00000463048 NWD1Q149M9 1564 aa29.13■■■□□ 2.25
NUP43-205ENST00000463048 PROSER2Q86WR7 435 aaPredicted RBP29.13■■■□□ 2.25
NUP43-205ENST00000463048 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
NUP43-205ENST00000463048 STAC3Q96MF2 364 aa29.13■■■□□ 2.25
NUP43-205ENST00000463048 PIK3R4Q99570 1358 aa29.13■■■□□ 2.25
NUP43-205ENST00000463048 ASXL1Q8IXJ9 1541 aa29.11■■■□□ 2.25
NUP43-205ENST00000463048 PRAG1Q86YV5 1406 aa29.11■■■□□ 2.25
NUP43-205ENST00000463048 LAMC1P11047 1609 aa29.1■■■□□ 2.25
NUP43-205ENST00000463048 LRRC7Q96NW7 1537 aa29.1■■■□□ 2.25
NUP43-205ENST00000463048 XRN1Q8IZH2 1706 aaKnown RBP29.08■■■□□ 2.25
NUP43-205ENST00000463048 NKTRP30414 1462 aaKnown RBP29.06■■■□□ 2.24
NUP43-205ENST00000463048 TMEM94Q12767 1356 aa29.05■■■□□ 2.24
NUP43-205ENST00000463048 NBPF8Q3BBV2 869 aa29.04■■■□□ 2.24
NUP43-205ENST00000463048 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
NUP43-205ENST00000463048 C14orf37Q86TY3 774 aa29.03■■■□□ 2.24
NUP43-205ENST00000463048 YTHDC2Q9H6S0 1430 aaKnown RBP29.03■■■□□ 2.24
NUP43-205ENST00000463048 XIRP1Q702N8 1843 aaKnown RBP29.01■■■□□ 2.24
NUP43-205ENST00000463048 LRPPRCP42704 1394 aaKnown RBP29.01■■■□□ 2.23
NUP43-205ENST00000463048 ADGRB1O14514 1584 aa29■■■□□ 2.23
NUP43-205ENST00000463048 ROBO2Q9HCK4 1378 aa29■■■□□ 2.23
NUP43-205ENST00000463048 TRAK1Q9UPV9 953 aa28.98■■■□□ 2.23
NUP43-205ENST00000463048 KIAA1210Q9ULL0 1709 aa28.97■■■□□ 2.23
NUP43-205ENST00000463048 TRPM1Q7Z4N2 1603 aa28.97■■■□□ 2.23
NUP43-205ENST00000463048 WAPLQ7Z5K2 1190 aa28.96■■■□□ 2.23
NUP43-205ENST00000463048 ABCC11Q96J66 1382 aa28.94■■■□□ 2.22
NUP43-205ENST00000463048 SAFB2Q14151 953 aaKnown RBP eCLIP28.94■■■□□ 2.22
NUP43-205ENST00000463048 KNDC1Q76NI1 1749 aa28.93■■■□□ 2.22
NUP43-205ENST00000463048 PTCH1Q13635 1447 aa28.93■■■□□ 2.22
NUP43-205ENST00000463048 ROCK2O75116 1388 aaKnown RBP28.92■■■□□ 2.22
NUP43-205ENST00000463048 PLEKHH1Q9ULM0 1364 aa28.92■■■□□ 2.22
NUP43-205ENST00000463048 UBAP1LF5GYI3 381 aa28.91■■■□□ 2.22
NUP43-205ENST00000463048 TIMELESSQ9UNS1 1208 aa28.91■■■□□ 2.22
NUP43-205ENST00000463048 TECPR2O15040 1411 aa28.9■■■□□ 2.22
NUP43-205ENST00000463048 PRAM1Q96QH2 718 aa28.9■■■□□ 2.22
NUP43-205ENST00000463048 IQSEC2Q5JU85 1478 aa28.9■■■□□ 2.22
NUP43-205ENST00000463048 POGKQ9P215 609 aa28.89■■■□□ 2.22
NUP43-205ENST00000463048 MSH6P52701 1360 aa28.88■■■□□ 2.21
NUP43-205ENST00000463048 NALCNQ8IZF0 1738 aa28.86■■■□□ 2.21
NUP43-205ENST00000463048 SCAF1Q9H7N4 1312 aaKnown RBP28.86■■■□□ 2.21
NUP43-205ENST00000463048 RALGAPBQ86X10 1494 aa28.85■■■□□ 2.21
NUP43-205ENST00000463048 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.84■■■□□ 2.21
NUP43-205ENST00000463048 PIP4K2BP78356 416 aa28.84■■■□□ 2.21
NUP43-205ENST00000463048 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
NUP43-205ENST00000463048 CARD11Q9BXL7 1154 aa28.83■■■□□ 2.21
NUP43-205ENST00000463048 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
NUP43-205ENST00000463048 DLC1Q96QB1 1528 aa28.83■■■□□ 2.21
NUP43-205ENST00000463048 FAM135BQ49AJ0 1406 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms