RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
HPS1-206ENST00000462743 FOXD1Q16676 465 aa17.89■□□□□ 0.45
HPS1-206ENST00000462743 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
HPS1-206ENST00000462743 KIF1BO60333 1816 aa17.88■□□□□ 0.45
HPS1-206ENST00000462743 PLEKHG1Q9ULL1 1385 aa17.88■□□□□ 0.45
HPS1-206ENST00000462743 RPGRIP1LQ68CZ1 1315 aa17.86■□□□□ 0.45
HPS1-206ENST00000462743 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
HPS1-206ENST00000462743 TRIM26Q12899 539 aaPredicted RBP17.85■□□□□ 0.45
HPS1-206ENST00000462743 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
HPS1-206ENST00000462743 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
HPS1-206ENST00000462743 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
HPS1-206ENST00000462743 ZNF326Q5BKZ1 582 aaKnown RBP17.83■□□□□ 0.44
HPS1-206ENST00000462743 CPS1P31327 1500 aa17.82■□□□□ 0.44
HPS1-206ENST00000462743 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
HPS1-206ENST00000462743 ANKRD30BQ9BXX2 1392 aa17.82■□□□□ 0.44
HPS1-206ENST00000462743 KCNA6P17658 529 aa17.81■□□□□ 0.44
HPS1-206ENST00000462743 SLC26A8Q96RN1 970 aa17.81■□□□□ 0.44
HPS1-206ENST00000462743 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
HPS1-206ENST00000462743 SPATA31E1Q6ZUB1 1445 aa17.8■□□□□ 0.44
HPS1-206ENST00000462743 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
HPS1-206ENST00000462743 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
HPS1-206ENST00000462743 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
HPS1-206ENST00000462743 ILDR1Q86SU0 546 aaPredicted RBP17.78■□□□□ 0.44
HPS1-206ENST00000462743 BCANQ96GW7 911 aa17.78■□□□□ 0.44
HPS1-206ENST00000462743 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
HPS1-206ENST00000462743 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
HPS1-206ENST00000462743 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
HPS1-206ENST00000462743 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
HPS1-206ENST00000462743 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
HPS1-206ENST00000462743 LRRC7Q96NW7 1537 aa17.74■□□□□ 0.43
HPS1-206ENST00000462743 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
HPS1-206ENST00000462743 PPLO60437 1756 aa17.73■□□□□ 0.43
HPS1-206ENST00000462743 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
HPS1-206ENST00000462743 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
HPS1-206ENST00000462743 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
HPS1-206ENST00000462743 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
HPS1-206ENST00000462743 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
HPS1-206ENST00000462743 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
HPS1-206ENST00000462743 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
HPS1-206ENST00000462743 TOM1O60784 492 aa17.67■□□□□ 0.42
HPS1-206ENST00000462743 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
HPS1-206ENST00000462743 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
HPS1-206ENST00000462743 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
HPS1-206ENST00000462743 PTPRUQ92729 1446 aa17.66■□□□□ 0.42
HPS1-206ENST00000462743 XIRP1Q702N8 1843 aaKnown RBP17.66■□□□□ 0.42
HPS1-206ENST00000462743 UBAP1LF5GYI3 381 aa17.66■□□□□ 0.42
HPS1-206ENST00000462743 METP08581 1390 aa17.66■□□□□ 0.42
HPS1-206ENST00000462743 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
HPS1-206ENST00000462743 ALKQ9UM73 1620 aa17.65■□□□□ 0.42
HPS1-206ENST00000462743 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
HPS1-206ENST00000462743 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
HPS1-206ENST00000462743 C14orf93Q9H972 538 aaKnown RBP17.62■□□□□ 0.41
HPS1-206ENST00000462743 MYOM2P54296 1465 aa17.62■□□□□ 0.41
HPS1-206ENST00000462743 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
HPS1-206ENST00000462743 PIK3C2GO75747 1445 aa17.61■□□□□ 0.41
HPS1-206ENST00000462743 PRAG1Q86YV5 1406 aa17.6■□□□□ 0.41
HPS1-206ENST00000462743 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
HPS1-206ENST00000462743 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
HPS1-206ENST00000462743 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.4
HPS1-206ENST00000462743 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
HPS1-206ENST00000462743 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
HPS1-206ENST00000462743 MSH6P52701 1360 aa17.55■□□□□ 0.4
HPS1-206ENST00000462743 ABCC11Q96J66 1382 aa17.55■□□□□ 0.4
HPS1-206ENST00000462743 CFAP70Q5T0N1 1121 aa17.55■□□□□ 0.4
HPS1-206ENST00000462743 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
HPS1-206ENST00000462743 KDM2AQ9Y2K7 1162 aa17.54■□□□□ 0.4
HPS1-206ENST00000462743 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
HPS1-206ENST00000462743 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
HPS1-206ENST00000462743 TECPR2O15040 1411 aa17.53■□□□□ 0.4
HPS1-206ENST00000462743 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
HPS1-206ENST00000462743 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.4
HPS1-206ENST00000462743 FAM135BQ49AJ0 1406 aa17.52■□□□□ 0.4
HPS1-206ENST00000462743 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.39
HPS1-206ENST00000462743 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
HPS1-206ENST00000462743 SLAIN2Q9P270 581 aa17.51■□□□□ 0.39
HPS1-206ENST00000462743 LAMC1P11047 1609 aa17.5■□□□□ 0.39
HPS1-206ENST00000462743 DCCP43146 1447 aa17.5■□□□□ 0.39
HPS1-206ENST00000462743 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
HPS1-206ENST00000462743 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
HPS1-206ENST00000462743 ASXL1Q8IXJ9 1541 aa17.5■□□□□ 0.39
HPS1-206ENST00000462743 YTHDC2Q9H6S0 1430 aaKnown RBP17.49■□□□□ 0.39
HPS1-206ENST00000462743 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
HPS1-206ENST00000462743 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.49■□□□□ 0.39
HPS1-206ENST00000462743 ATF3P18847 181 aa17.48■□□□□ 0.39
HPS1-206ENST00000462743 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
HPS1-206ENST00000462743 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
HPS1-206ENST00000462743 STK26Q9P289 416 aa17.46■□□□□ 0.39
HPS1-206ENST00000462743 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
HPS1-206ENST00000462743 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
HPS1-206ENST00000462743 ADGRB1O14514 1584 aa17.45■□□□□ 0.38
HPS1-206ENST00000462743 HSPA1LP34931 641 aa17.44■□□□□ 0.38
HPS1-206ENST00000462743 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
HPS1-206ENST00000462743 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
HPS1-206ENST00000462743 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
HPS1-206ENST00000462743 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
HPS1-206ENST00000462743 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
HPS1-206ENST00000462743 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
HPS1-206ENST00000462743 MST1RQ04912 1400 aa17.39■□□□□ 0.38
HPS1-206ENST00000462743 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
HPS1-206ENST00000462743 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms