RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 POLR3EQ9NVU0 708 aa5.1□□□□□ -1.59
SMC4-203ENST00000462668 UNCXA6NJT0 531 aa5.1□□□□□ -1.59
SMC4-203ENST00000462668 ATN1P54259 1190 aaPredicted RBP5.1□□□□□ -1.59
SMC4-203ENST00000462668 SLAIN1Q8ND83 568 aa5.09□□□□□ -1.59
SMC4-203ENST00000462668 TRIM34Q9BYJ4 488 aa5.09□□□□□ -1.59
SMC4-203ENST00000462668 TXNDC2Q86VQ3 553 aa5.09□□□□□ -1.59
SMC4-203ENST00000462668 PADI6Q6TGC4 694 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 CHRDL2Q6WN34 429 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 DNAJC14Q6Y2X3 702 aaPredicted RBP5.08□□□□□ -1.6
SMC4-203ENST00000462668 UCN2Q96RP3 112 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 TBC1D2BQ9UPU7 963 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 ACIN1Q9UKV3 1341 aaKnown RBP5.08□□□□□ -1.6
SMC4-203ENST00000462668 FOSBP53539 338 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 NOM1Q5C9Z4 860 aaKnown RBP5.08□□□□□ -1.6
SMC4-203ENST00000462668 PPP1R12CQ9BZL4 782 aa5.08□□□□□ -1.6
SMC4-203ENST00000462668 NDUFB9Q9Y6M9 179 aa5.07□□□□□ -1.6
SMC4-203ENST00000462668 WASHC4Q2M389 1173 aa5.07□□□□□ -1.6
SMC4-203ENST00000462668 UPF1Q92900 1129 aaKnown RBP eCLIP5.07□□□□□ -1.63e-11■■■■■ 47.5
SMC4-203ENST00000462668 L3MBTL3Q96JM7 780 aaPredicted RBP5.07□□□□□ -1.6
SMC4-203ENST00000462668 CALR3Q96L12 384 aaKnown RBP5.07□□□□□ -1.6
SMC4-203ENST00000462668 GALR2O43603 387 aaPredicted RBP5.06□□□□□ -1.6
SMC4-203ENST00000462668 RTL5Q5HYW3 569 aaPredicted RBP5.06□□□□□ -1.6
SMC4-203ENST00000462668 POTEHQ6S545 545 aa5.06□□□□□ -1.6
SMC4-203ENST00000462668 ZNF710Q8N1W2 664 aa5.06□□□□□ -1.6
SMC4-203ENST00000462668 POTEFA5A3E0 1075 aa5.06□□□□□ -1.6
SMC4-203ENST00000462668 E9PSI1 815 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 QPCTQ16769 361 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 FAM198AQ9UFP1 575 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 USP17L8P0C7I0 530 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 PHLDB3Q6NSJ2 640 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 VAMP1P23763 118 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 PRSS12P56730 875 aa5.05□□□□□ -1.6
SMC4-203ENST00000462668 WWC1Q8IX03 1113 aa5.04□□□□□ -1.6
SMC4-203ENST00000462668 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.04□□□□□ -1.6
SMC4-203ENST00000462668 SOX11P35716 441 aa5.04□□□□□ -1.6
SMC4-203ENST00000462668 FAM161AQ3B820 660 aa5.04□□□□□ -1.6
SMC4-203ENST00000462668 C6orf132Q5T0Z8 1188 aa5.04□□□□□ -1.6
SMC4-203ENST00000462668 HDGFL1Q5TGJ6 251 aa5.04□□□□□ -1.6
SMC4-203ENST00000462668 RBM25P49756 843 aaKnown RBP5.03□□□□□ -1.6
SMC4-203ENST00000462668 KANK4Q5T7N3 995 aaPredicted RBP5.03□□□□□ -1.6
SMC4-203ENST00000462668 PCDHGA4Q9Y5G9 962 aa5.03□□□□□ -1.6
SMC4-203ENST00000462668 PALM3A6NDB9 673 aaPredicted RBP5.03□□□□□ -1.6
SMC4-203ENST00000462668 ERCC3P19447 782 aa5.03□□□□□ -1.6
SMC4-203ENST00000462668 IVNS1ABPQ9Y6Y0 642 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 MOXD2PA6NHM9 499 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 MAP3K7O43318 606 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 PUS7Q96PZ0 661 aaKnown RBP5.02□□□□□ -1.61
SMC4-203ENST00000462668 NFATC2IPQ8NCF5 419 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 VRTNQ9H8Y1 702 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 PRM3Q9NNZ6 103 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 KIAA1522Q9P206 1035 aaPredicted RBP5.02□□□□□ -1.61
SMC4-203ENST00000462668 PCDHB15Q9Y5E8 787 aa5.02□□□□□ -1.61
SMC4-203ENST00000462668 MAFBQ9Y5Q3 323 aaPredicted RBP5.02□□□□□ -1.61
SMC4-203ENST00000462668 C3orf80F5H4A9 247 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 SLAIN2Q9P270 581 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 CCDC27Q2M243 656 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 NLRP7Q8WX94 980 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 HMX1Q9NP08 348 aaPredicted RBP5.01□□□□□ -1.61
SMC4-203ENST00000462668 TMEM134Q9H6X4 195 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 ZMIZ1Q9ULJ6 1067 aa5.01□□□□□ -1.61
SMC4-203ENST00000462668 ABL2P42684 1182 aa5□□□□□ -1.61
SMC4-203ENST00000462668 RBM46Q8TBY0 533 aaKnown RBP5□□□□□ -1.61
SMC4-203ENST00000462668 CSB-PGBD3P0DP91 1061 aa5□□□□□ -1.61
SMC4-203ENST00000462668 FAM69CQ0P6D2 419 aa5□□□□□ -1.61
SMC4-203ENST00000462668 PLEKHM2Q8IWE5 1019 aa5□□□□□ -1.61
SMC4-203ENST00000462668 PRR7Q8TB68 274 aa5□□□□□ -1.61
SMC4-203ENST00000462668 C8orf37Q96NL8 207 aa5□□□□□ -1.61
SMC4-203ENST00000462668 RCCD1A6NED2 376 aa5□□□□□ -1.61
SMC4-203ENST00000462668 NDUFV2P19404 249 aa5□□□□□ -1.61
SMC4-203ENST00000462668 USP46P62068 366 aa4.99□□□□□ -1.61
SMC4-203ENST00000462668 PCDHGC3Q9UN70 934 aa4.99□□□□□ -1.61
SMC4-203ENST00000462668 CDCA7LQ96GN5 454 aa4.99□□□□□ -1.61
SMC4-203ENST00000462668 CHIC2Q9UKJ5 165 aa4.99□□□□□ -1.61
SMC4-203ENST00000462668 HOXA2O43364 376 aa4.99□□□□□ -1.61
SMC4-203ENST00000462668 COLQQ9Y215 455 aaPredicted RBP4.99□□□□□ -1.61
SMC4-203ENST00000462668 ZDHHC16Q969W1 377 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 C7P10643 843 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 GCGRP47871 477 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 SULF1Q8IWU6 871 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 C1orf216Q8TAB5 229 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 ZBTB3Q9H5J0 574 aa4.98□□□□□ -1.61
SMC4-203ENST00000462668 ATP9BO43861 1147 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 PELP1Q8IZL8 1130 aaKnown RBP4.97□□□□□ -1.61
SMC4-203ENST00000462668 CABLES1Q8TDN4 633 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 ADAM33Q9BZ11 813 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 TSKSQ9UJT2 592 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 DKK1O94907 266 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 SSFA2P28290 1259 aa4.97□□□□□ -1.61
SMC4-203ENST00000462668 TFIP11Q9UBB9 837 aaKnown RBP4.97□□□□□ -1.61
SMC4-203ENST00000462668 CARNS1A5YM72 827 aa4.96□□□□□ -1.61
SMC4-203ENST00000462668 COL9A1P20849 921 aa4.96□□□□□ -1.61
SMC4-203ENST00000462668 RBM33Q96EV2 1170 aaKnown RBP4.96□□□□□ -1.61
SMC4-203ENST00000462668 DNAJB2P25686 324 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 CTDSPL2Q05D32 466 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 SIRT1Q96EB6 747 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 AP1G2O75843 785 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 PLCG2P16885 1265 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 RSPH4AQ5TD94 716 aa4.96□□□□□ -1.62
SMC4-203ENST00000462668 CFAP99D6REC4 459 aa4.95□□□□□ -1.62
SMC4-203ENST00000462668 CLP1Q92989 425 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms