RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 RIMS2Q9UQ26 1411 aa19.86■□□□□ 0.77
LRRC47-202ENST00000462356 SLC26A8Q96RN1 970 aa19.86■□□□□ 0.77
LRRC47-202ENST00000462356 CLTCL1P53675 1640 aa19.86■□□□□ 0.77
LRRC47-202ENST00000462356 PPP1R15AO75807 674 aaPredicted RBP19.85■□□□□ 0.77
LRRC47-202ENST00000462356 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
LRRC47-202ENST00000462356 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
LRRC47-202ENST00000462356 TRPM2O94759 1503 aa19.82■□□□□ 0.76
LRRC47-202ENST00000462356 STRCP1A6NGW2 1772 aa19.81■□□□□ 0.76
LRRC47-202ENST00000462356 HDGFP51858 240 aaKnown RBP19.8■□□□□ 0.76
LRRC47-202ENST00000462356 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
LRRC47-202ENST00000462356 KIF1BO60333 1816 aa19.77■□□□□ 0.76
LRRC47-202ENST00000462356 PLEKHG1Q9ULL1 1385 aa19.76■□□□□ 0.75
LRRC47-202ENST00000462356 CPS1P31327 1500 aa19.75■□□□□ 0.75
LRRC47-202ENST00000462356 UBAP1LF5GYI3 381 aa19.73■□□□□ 0.75
LRRC47-202ENST00000462356 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
LRRC47-202ENST00000462356 RGL3Q3MIN7 710 aa19.72■□□□□ 0.75
LRRC47-202ENST00000462356 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
LRRC47-202ENST00000462356 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
LRRC47-202ENST00000462356 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
LRRC47-202ENST00000462356 CCDC144AA2RUR9 1427 aa19.7■□□□□ 0.74
LRRC47-202ENST00000462356 KCNA6P17658 529 aa19.7■□□□□ 0.74
LRRC47-202ENST00000462356 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
LRRC47-202ENST00000462356 ADAMTS13Q76LX8 1427 aa19.69■□□□□ 0.74
LRRC47-202ENST00000462356 HRCP23327 699 aa19.68■□□□□ 0.74
LRRC47-202ENST00000462356 TBX22Q9Y458 520 aa19.68■□□□□ 0.74
LRRC47-202ENST00000462356 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
LRRC47-202ENST00000462356 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
LRRC47-202ENST00000462356 PIP4K2BP78356 416 aa19.65■□□□□ 0.74
LRRC47-202ENST00000462356 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
LRRC47-202ENST00000462356 XIRP1Q702N8 1843 aaKnown RBP19.64■□□□□ 0.73
LRRC47-202ENST00000462356 CHD2O14647 1828 aaKnown RBP19.63■□□□□ 0.73
LRRC47-202ENST00000462356 VGFO15240 615 aaPredicted RBP19.63■□□□□ 0.73
LRRC47-202ENST00000462356 SPATA31E1Q6ZUB1 1445 aa19.62■□□□□ 0.73
LRRC47-202ENST00000462356 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
LRRC47-202ENST00000462356 PPLO60437 1756 aa19.62■□□□□ 0.73
LRRC47-202ENST00000462356 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 TOM1O60784 492 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 AMOTL2Q9Y2J4 779 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
LRRC47-202ENST00000462356 METP08581 1390 aa19.6■□□□□ 0.73
LRRC47-202ENST00000462356 ADGRF5Q8IZF2 1346 aa19.6■□□□□ 0.73
LRRC47-202ENST00000462356 DIP2AQ14689 1571 aa19.6■□□□□ 0.73
LRRC47-202ENST00000462356 ALKQ9UM73 1620 aa19.58■□□□□ 0.73
LRRC47-202ENST00000462356 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
LRRC47-202ENST00000462356 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
LRRC47-202ENST00000462356 PIK3R4Q99570 1358 aa19.56■□□□□ 0.72
LRRC47-202ENST00000462356 IFT172Q9UG01 1749 aa19.54■□□□□ 0.72
LRRC47-202ENST00000462356 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
LRRC47-202ENST00000462356 SETD1AO15047 1707 aaKnown RBP19.52■□□□□ 0.72
LRRC47-202ENST00000462356 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.72
LRRC47-202ENST00000462356 XRN1Q8IZH2 1706 aaKnown RBP19.5■□□□□ 0.71
LRRC47-202ENST00000462356 MSH6P52701 1360 aa19.49■□□□□ 0.71
LRRC47-202ENST00000462356 HSPA1LP34931 641 aa19.49■□□□□ 0.71
LRRC47-202ENST00000462356 TMEM132EQ6IEE7 984 aa19.49■□□□□ 0.71
LRRC47-202ENST00000462356 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
LRRC47-202ENST00000462356 STK26Q9P289 416 aa19.47■□□□□ 0.71
LRRC47-202ENST00000462356 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
LRRC47-202ENST00000462356 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
LRRC47-202ENST00000462356 SIN3AQ96ST3 1273 aa19.45■□□□□ 0.7
LRRC47-202ENST00000462356 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.44■□□□□ 0.7
LRRC47-202ENST00000462356 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
LRRC47-202ENST00000462356 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
LRRC47-202ENST00000462356 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
LRRC47-202ENST00000462356 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
LRRC47-202ENST00000462356 MYOM2P54296 1465 aa19.42■□□□□ 0.7
LRRC47-202ENST00000462356 C14orf93Q9H972 538 aaKnown RBP19.42■□□□□ 0.7
LRRC47-202ENST00000462356 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
LRRC47-202ENST00000462356 ASXL1Q8IXJ9 1541 aa19.41■□□□□ 0.7
LRRC47-202ENST00000462356 ATF3P18847 181 aa19.41■□□□□ 0.7
LRRC47-202ENST00000462356 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
LRRC47-202ENST00000462356 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
LRRC47-202ENST00000462356 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
LRRC47-202ENST00000462356 ROBO1Q9Y6N7 1651 aa19.39■□□□□ 0.69
LRRC47-202ENST00000462356 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
LRRC47-202ENST00000462356 NALCNQ8IZF0 1738 aa19.37■□□□□ 0.69
LRRC47-202ENST00000462356 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
LRRC47-202ENST00000462356 PTCH1Q13635 1447 aa19.36■□□□□ 0.69
LRRC47-202ENST00000462356 LRPPRCP42704 1394 aaKnown RBP19.36■□□□□ 0.69
LRRC47-202ENST00000462356 PCGF6Q9BYE7 350 aa19.36■□□□□ 0.69
LRRC47-202ENST00000462356 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
LRRC47-202ENST00000462356 ADGRL3Q9HAR2 1447 aa19.35■□□□□ 0.69
LRRC47-202ENST00000462356 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
LRRC47-202ENST00000462356 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
LRRC47-202ENST00000462356 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.68
LRRC47-202ENST00000462356 LAMC1P11047 1609 aa19.32■□□□□ 0.68
LRRC47-202ENST00000462356 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
LRRC47-202ENST00000462356 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
LRRC47-202ENST00000462356 MST1RQ04912 1400 aa19.31■□□□□ 0.68
LRRC47-202ENST00000462356 PRAG1Q86YV5 1406 aa19.31■□□□□ 0.68
LRRC47-202ENST00000462356 TECPR2O15040 1411 aa19.3■□□□□ 0.68
LRRC47-202ENST00000462356 DCCP43146 1447 aa19.3■□□□□ 0.68
LRRC47-202ENST00000462356 KNDC1Q76NI1 1749 aa19.3■□□□□ 0.68
LRRC47-202ENST00000462356 NUTM2FA1L443 756 aa19.29■□□□□ 0.68
LRRC47-202ENST00000462356 BRINP3Q76B58 766 aa19.29■□□□□ 0.68
LRRC47-202ENST00000462356 STAC3Q96MF2 364 aa19.29■□□□□ 0.68
LRRC47-202ENST00000462356 ADGRB1O14514 1584 aa19.28■□□□□ 0.68
LRRC47-202ENST00000462356 DDX17Q92841 729 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms