RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
PKP4-208ENST00000462335 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
PKP4-208ENST00000462335 SLIT1O75093 1534 aa13.95□□□□□ -0.18
PKP4-208ENST00000462335 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
PKP4-208ENST00000462335 TRPM2O94759 1503 aa13.95□□□□□ -0.18
PKP4-208ENST00000462335 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
PKP4-208ENST00000462335 MYO5BQ9ULV0 1848 aa13.94□□□□□ -0.18
PKP4-208ENST00000462335 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
PKP4-208ENST00000462335 ARHGAP23Q9P227 1491 aa13.93□□□□□ -0.18
PKP4-208ENST00000462335 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
PKP4-208ENST00000462335 MED14O60244 1454 aa13.93□□□□□ -0.18
PKP4-208ENST00000462335 CLTCL1P53675 1640 aa13.92□□□□□ -0.18
PKP4-208ENST00000462335 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
PKP4-208ENST00000462335 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
PKP4-208ENST00000462335 NEURL4Q96JN8 1562 aa13.9□□□□□ -0.18
PKP4-208ENST00000462335 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
PKP4-208ENST00000462335 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
PKP4-208ENST00000462335 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
PKP4-208ENST00000462335 KCNA6P17658 529 aa13.88□□□□□ -0.19
PKP4-208ENST00000462335 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
PKP4-208ENST00000462335 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
PKP4-208ENST00000462335 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
PKP4-208ENST00000462335 FBXO41Q8TF61 875 aa13.86□□□□□ -0.19
PKP4-208ENST00000462335 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
PKP4-208ENST00000462335 CPS1P31327 1500 aa13.85□□□□□ -0.19
PKP4-208ENST00000462335 ANKRD30BQ9BXX2 1392 aa13.85□□□□□ -0.19
PKP4-208ENST00000462335 TOM1O60784 492 aa13.85□□□□□ -0.19
PKP4-208ENST00000462335 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
PKP4-208ENST00000462335 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
PKP4-208ENST00000462335 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
PKP4-208ENST00000462335 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
PKP4-208ENST00000462335 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
PKP4-208ENST00000462335 LTBP4Q8N2S1 1624 aa13.8□□□□□ -0.2
PKP4-208ENST00000462335 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
PKP4-208ENST00000462335 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
PKP4-208ENST00000462335 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
PKP4-208ENST00000462335 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
PKP4-208ENST00000462335 SPATA31E1Q6ZUB1 1445 aa13.79□□□□□ -0.2
PKP4-208ENST00000462335 IQSEC2Q5JU85 1478 aa13.79□□□□□ -0.2
PKP4-208ENST00000462335 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
PKP4-208ENST00000462335 STK26Q9P289 416 aa13.78□□□□□ -0.2
PKP4-208ENST00000462335 ADGRF5Q8IZF2 1346 aa13.78□□□□□ -0.2
PKP4-208ENST00000462335 ATF3P18847 181 aa13.77□□□□□ -0.21
PKP4-208ENST00000462335 PPLO60437 1756 aa13.76□□□□□ -0.21
PKP4-208ENST00000462335 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
PKP4-208ENST00000462335 MSH6P52701 1360 aa13.76□□□□□ -0.21
PKP4-208ENST00000462335 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
PKP4-208ENST00000462335 SIN3AQ96ST3 1273 aa13.76□□□□□ -0.21
PKP4-208ENST00000462335 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
PKP4-208ENST00000462335 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
PKP4-208ENST00000462335 METP08581 1390 aa13.74□□□□□ -0.21
PKP4-208ENST00000462335 DHX57Q6P158 1386 aaKnown RBP13.74□□□□□ -0.21
PKP4-208ENST00000462335 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
PKP4-208ENST00000462335 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
PKP4-208ENST00000462335 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
PKP4-208ENST00000462335 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
PKP4-208ENST00000462335 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
PKP4-208ENST00000462335 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
PKP4-208ENST00000462335 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
PKP4-208ENST00000462335 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
PKP4-208ENST00000462335 C14orf93Q9H972 538 aaKnown RBP13.72□□□□□ -0.21
PKP4-208ENST00000462335 POGKQ9P215 609 aa13.72□□□□□ -0.21
PKP4-208ENST00000462335 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
PKP4-208ENST00000462335 TONSLQ96HA7 1378 aa13.71□□□□□ -0.21
PKP4-208ENST00000462335 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
PKP4-208ENST00000462335 MYOM2P54296 1465 aa13.69□□□□□ -0.22
PKP4-208ENST00000462335 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
PKP4-208ENST00000462335 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
PKP4-208ENST00000462335 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
PKP4-208ENST00000462335 LRPPRCP42704 1394 aaKnown RBP13.66□□□□□ -0.22
PKP4-208ENST00000462335 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
PKP4-208ENST00000462335 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
PKP4-208ENST00000462335 LAMC1P11047 1609 aa13.64□□□□□ -0.23
PKP4-208ENST00000462335 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
PKP4-208ENST00000462335 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
PKP4-208ENST00000462335 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
PKP4-208ENST00000462335 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
PKP4-208ENST00000462335 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
PKP4-208ENST00000462335 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
PKP4-208ENST00000462335 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
PKP4-208ENST00000462335 NRXN1Q9ULB1 1477 aa13.61□□□□□ -0.23
PKP4-208ENST00000462335 XIRP1Q702N8 1843 aaKnown RBP13.61□□□□□ -0.23
PKP4-208ENST00000462335 HSPA1LP34931 641 aa13.6□□□□□ -0.23
PKP4-208ENST00000462335 PRAG1Q86YV5 1406 aa13.59□□□□□ -0.23
PKP4-208ENST00000462335 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
PKP4-208ENST00000462335 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
PKP4-208ENST00000462335 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
PKP4-208ENST00000462335 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
PKP4-208ENST00000462335 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.23
PKP4-208ENST00000462335 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
PKP4-208ENST00000462335 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
PKP4-208ENST00000462335 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
PKP4-208ENST00000462335 DCCP43146 1447 aa13.57□□□□□ -0.24
PKP4-208ENST00000462335 FAM135BQ49AJ0 1406 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms