RNA–Protein interactions for RNA: ENST00000461682.1

NDUFB4-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 3

Gene NDUFB4, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-202ENST00000461682 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
NDUFB4-202ENST00000461682 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
NDUFB4-202ENST00000461682 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
NDUFB4-202ENST00000461682 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.73■■□□□ 1.23
NDUFB4-202ENST00000461682 IQSEC2Q5JU85 1478 aa22.72■■□□□ 1.23
NDUFB4-202ENST00000461682 CPS1P31327 1500 aa22.72■■□□□ 1.23
NDUFB4-202ENST00000461682 BCANQ96GW7 911 aa22.7■■□□□ 1.22
NDUFB4-202ENST00000461682 PLEKHG1Q9ULL1 1385 aa22.69■■□□□ 1.22
NDUFB4-202ENST00000461682 FOXD1Q16676 465 aa22.69■■□□□ 1.22
NDUFB4-202ENST00000461682 ZNF326Q5BKZ1 582 aaKnown RBP22.68■■□□□ 1.22
NDUFB4-202ENST00000461682 KIF1BO60333 1816 aa22.68■■□□□ 1.22
NDUFB4-202ENST00000461682 HRCP23327 699 aa22.66■■□□□ 1.22
NDUFB4-202ENST00000461682 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
NDUFB4-202ENST00000461682 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
NDUFB4-202ENST00000461682 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
NDUFB4-202ENST00000461682 CCDC144AA2RUR9 1427 aa22.63■■□□□ 1.21
NDUFB4-202ENST00000461682 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
NDUFB4-202ENST00000461682 NEXMIFQ5QGS0 1516 aa22.58■■□□□ 1.21
NDUFB4-202ENST00000461682 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
NDUFB4-202ENST00000461682 LRRC7Q96NW7 1537 aa22.57■■□□□ 1.2
NDUFB4-202ENST00000461682 KCNA6P17658 529 aa22.57■■□□□ 1.2
NDUFB4-202ENST00000461682 TBX22Q9Y458 520 aa22.57■■□□□ 1.2
NDUFB4-202ENST00000461682 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
NDUFB4-202ENST00000461682 RPGRIP1LQ68CZ1 1315 aa22.56■■□□□ 1.2
NDUFB4-202ENST00000461682 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
NDUFB4-202ENST00000461682 NWD1Q149M9 1564 aa22.54■■□□□ 1.2
NDUFB4-202ENST00000461682 SETBP1Q9Y6X0 1596 aa22.54■■□□□ 1.2
NDUFB4-202ENST00000461682 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
NDUFB4-202ENST00000461682 NKTRP30414 1462 aaKnown RBP22.52■■□□□ 1.2
NDUFB4-202ENST00000461682 SPATA31E1Q6ZUB1 1445 aa22.51■■□□□ 1.19
NDUFB4-202ENST00000461682 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
NDUFB4-202ENST00000461682 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
NDUFB4-202ENST00000461682 CHD2O14647 1828 aaKnown RBP22.5■■□□□ 1.19
NDUFB4-202ENST00000461682 PPLO60437 1756 aa22.49■■□□□ 1.19
NDUFB4-202ENST00000461682 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
NDUFB4-202ENST00000461682 TOM1O60784 492 aa22.48■■□□□ 1.19
NDUFB4-202ENST00000461682 PROSER2Q86WR7 435 aaPredicted RBP22.48■■□□□ 1.19
NDUFB4-202ENST00000461682 ANKRD30BQ9BXX2 1392 aa22.48■■□□□ 1.19
NDUFB4-202ENST00000461682 TMEM94Q12767 1356 aa22.46■■□□□ 1.19
NDUFB4-202ENST00000461682 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
NDUFB4-202ENST00000461682 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
NDUFB4-202ENST00000461682 IFT172Q9UG01 1749 aa22.42■■□□□ 1.18
NDUFB4-202ENST00000461682 METP08581 1390 aa22.41■■□□□ 1.18
NDUFB4-202ENST00000461682 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
NDUFB4-202ENST00000461682 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
NDUFB4-202ENST00000461682 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
NDUFB4-202ENST00000461682 PIP4K2BP78356 416 aa22.4■■□□□ 1.18
NDUFB4-202ENST00000461682 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
NDUFB4-202ENST00000461682 ALKQ9UM73 1620 aa22.39■■□□□ 1.18
NDUFB4-202ENST00000461682 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
NDUFB4-202ENST00000461682 XRN1Q8IZH2 1706 aaKnown RBP22.38■■□□□ 1.17
NDUFB4-202ENST00000461682 NCOA3Q9Y6Q9 1424 aa22.37■■□□□ 1.17
NDUFB4-202ENST00000461682 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
NDUFB4-202ENST00000461682 MSH6P52701 1360 aa22.37■■□□□ 1.17
NDUFB4-202ENST00000461682 C14orf37Q86TY3 774 aa22.35■■□□□ 1.17
NDUFB4-202ENST00000461682 MYOM2P54296 1465 aa22.34■■□□□ 1.17
NDUFB4-202ENST00000461682 PIK3C2GO75747 1445 aa22.33■■□□□ 1.17
NDUFB4-202ENST00000461682 NRXN1Q9ULB1 1477 aa22.29■■□□□ 1.16
NDUFB4-202ENST00000461682 C19orf44Q9H6X5 657 aa22.28■■□□□ 1.16
NDUFB4-202ENST00000461682 PTCH1Q13635 1447 aa22.28■■□□□ 1.16
NDUFB4-202ENST00000461682 PRAG1Q86YV5 1406 aa22.27■■□□□ 1.16
NDUFB4-202ENST00000461682 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
NDUFB4-202ENST00000461682 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
NDUFB4-202ENST00000461682 LAMC1P11047 1609 aa22.26■■□□□ 1.15
NDUFB4-202ENST00000461682 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
NDUFB4-202ENST00000461682 ATF3P18847 181 aa22.25■■□□□ 1.15
NDUFB4-202ENST00000461682 HSPA1LP34931 641 aa22.25■■□□□ 1.15
NDUFB4-202ENST00000461682 CADPS2Q86UW7 1296 aa22.25■■□□□ 1.15
NDUFB4-202ENST00000461682 C14orf93Q9H972 538 aaKnown RBP22.24■■□□□ 1.15
NDUFB4-202ENST00000461682 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
NDUFB4-202ENST00000461682 ROBO2Q9HCK4 1378 aa22.24■■□□□ 1.15
NDUFB4-202ENST00000461682 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
NDUFB4-202ENST00000461682 SLAIN2Q9P270 581 aa22.23■■□□□ 1.15
NDUFB4-202ENST00000461682 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
NDUFB4-202ENST00000461682 DCCP43146 1447 aa22.23■■□□□ 1.15
NDUFB4-202ENST00000461682 ASXL1Q8IXJ9 1541 aa22.22■■□□□ 1.15
NDUFB4-202ENST00000461682 TMEM132EQ6IEE7 984 aa22.22■■□□□ 1.15
NDUFB4-202ENST00000461682 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
NDUFB4-202ENST00000461682 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
NDUFB4-202ENST00000461682 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
NDUFB4-202ENST00000461682 STK26Q9P289 416 aa22.21■■□□□ 1.15
NDUFB4-202ENST00000461682 TECPR2O15040 1411 aa22.2■■□□□ 1.14
NDUFB4-202ENST00000461682 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.14
NDUFB4-202ENST00000461682 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
NDUFB4-202ENST00000461682 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
NDUFB4-202ENST00000461682 NALCNQ8IZF0 1738 aa22.19■■□□□ 1.14
NDUFB4-202ENST00000461682 KNDC1Q76NI1 1749 aa22.18■■□□□ 1.14
NDUFB4-202ENST00000461682 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
NDUFB4-202ENST00000461682 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
NDUFB4-202ENST00000461682 MST1RQ04912 1400 aa22.12■■□□□ 1.13
NDUFB4-202ENST00000461682 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
NDUFB4-202ENST00000461682 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
NDUFB4-202ENST00000461682 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
NDUFB4-202ENST00000461682 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
NDUFB4-202ENST00000461682 DLC1Q96QB1 1528 aa22.08■■□□□ 1.13
NDUFB4-202ENST00000461682 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
NDUFB4-202ENST00000461682 CDC42BPGQ6DT37 1551 aa22.08■■□□□ 1.12
NDUFB4-202ENST00000461682 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
NDUFB4-202ENST00000461682 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
NDUFB4-202ENST00000461682 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms