RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
CHRD-209ENST00000461120 PIK3C2BO00750 1634 aa20.27■□□□□ 0.83
CHRD-209ENST00000461120 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
CHRD-209ENST00000461120 IDI1Q13907 227 aa20.26■□□□□ 0.83
CHRD-209ENST00000461120 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
CHRD-209ENST00000461120 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
CHRD-209ENST00000461120 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
CHRD-209ENST00000461120 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
CHRD-209ENST00000461120 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
CHRD-209ENST00000461120 STRCP1A6NGW2 1772 aa20.2■□□□□ 0.82
CHRD-209ENST00000461120 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
CHRD-209ENST00000461120 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
CHRD-209ENST00000461120 MED14O60244 1454 aa20.18■□□□□ 0.82
CHRD-209ENST00000461120 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
CHRD-209ENST00000461120 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
CHRD-209ENST00000461120 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
CHRD-209ENST00000461120 KIF1BO60333 1816 aa20.14■□□□□ 0.81
CHRD-209ENST00000461120 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
CHRD-209ENST00000461120 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
CHRD-209ENST00000461120 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
CHRD-209ENST00000461120 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 SLIT1O75093 1534 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
CHRD-209ENST00000461120 XIRP1Q702N8 1843 aaKnown RBP20.06■□□□□ 0.8
CHRD-209ENST00000461120 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 RXRBP28702 533 aa20.05■□□□□ 0.8
CHRD-209ENST00000461120 RGL3Q3MIN7 710 aa20.05■□□□□ 0.8
CHRD-209ENST00000461120 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
CHRD-209ENST00000461120 LTKP29376 864 aa20.04■□□□□ 0.8
CHRD-209ENST00000461120 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
CHRD-209ENST00000461120 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
CHRD-209ENST00000461120 NEXMIFQ5QGS0 1516 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
CHRD-209ENST00000461120 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 JCADQ9P266 1359 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
CHRD-209ENST00000461120 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
CHRD-209ENST00000461120 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
CHRD-209ENST00000461120 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
CHRD-209ENST00000461120 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHRD-209ENST00000461120 PHLPP1O60346 1717 aa20.01■□□□□ 0.79
CHRD-209ENST00000461120 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
CHRD-209ENST00000461120 PPLO60437 1756 aa19.99■□□□□ 0.79
CHRD-209ENST00000461120 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
CHRD-209ENST00000461120 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
CHRD-209ENST00000461120 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
CHRD-209ENST00000461120 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
CHRD-209ENST00000461120 VGFO15240 615 aaPredicted RBP19.95■□□□□ 0.78
CHRD-209ENST00000461120 SPATA31A6Q5VVP1 1343 aa19.94■□□□□ 0.78
CHRD-209ENST00000461120 MYOM2P54296 1465 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 ADGRF5Q8IZF2 1346 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
CHRD-209ENST00000461120 BCANQ96GW7 911 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
CHRD-209ENST00000461120 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.77
CHRD-209ENST00000461120 NRXN3Q9Y4C0 1643 aa19.88■□□□□ 0.77
CHRD-209ENST00000461120 ADAMTS13Q76LX8 1427 aa19.88■□□□□ 0.77
CHRD-209ENST00000461120 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
CHRD-209ENST00000461120 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 TBX22Q9Y458 520 aa19.85■□□□□ 0.77
CHRD-209ENST00000461120 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
CHRD-209ENST00000461120 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
CHRD-209ENST00000461120 LRP6O75581 1613 aa19.83■□□□□ 0.76
CHRD-209ENST00000461120 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
CHRD-209ENST00000461120 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
CHRD-209ENST00000461120 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
CHRD-209ENST00000461120 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
CHRD-209ENST00000461120 SLAIN2Q9P270 581 aa19.8■□□□□ 0.76
CHRD-209ENST00000461120 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
CHRD-209ENST00000461120 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
CHRD-209ENST00000461120 SHPRHQ149N8 1683 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 METP08581 1390 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 LAMC1P11047 1609 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 MSH6P52701 1360 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
CHRD-209ENST00000461120 RBM6P78332 1123 aaKnown RBP19.77■□□□□ 0.76
CHRD-209ENST00000461120 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
CHRD-209ENST00000461120 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
CHRD-209ENST00000461120 PTPRUQ92729 1446 aa19.75■□□□□ 0.75
CHRD-209ENST00000461120 CHD2O14647 1828 aaKnown RBP19.74■□□□□ 0.75
CHRD-209ENST00000461120 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
CHRD-209ENST00000461120 KCNA6P17658 529 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms