RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMNDC1-203ENST00000460483 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
SMNDC1-203ENST00000460483 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
SMNDC1-203ENST00000460483 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
SMNDC1-203ENST00000460483 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
SMNDC1-203ENST00000460483 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
SMNDC1-203ENST00000460483 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
SMNDC1-203ENST00000460483 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
SMNDC1-203ENST00000460483 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
SMNDC1-203ENST00000460483 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
SMNDC1-203ENST00000460483 SPHKAPQ2M3C7 1700 aa15.86■□□□□ 0.13
SMNDC1-203ENST00000460483 PPP1R15AO75807 674 aaPredicted RBP15.86■□□□□ 0.13
SMNDC1-203ENST00000460483 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
SMNDC1-203ENST00000460483 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
SMNDC1-203ENST00000460483 POLA2Q14181 598 aa15.85■□□□□ 0.13
SMNDC1-203ENST00000460483 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
SMNDC1-203ENST00000460483 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
SMNDC1-203ENST00000460483 SYNMO15061 1565 aa15.84■□□□□ 0.13
SMNDC1-203ENST00000460483 NEURL4Q96JN8 1562 aa15.83■□□□□ 0.13
SMNDC1-203ENST00000460483 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.13
SMNDC1-203ENST00000460483 TMEM2Q9UHN6 1383 aa15.83■□□□□ 0.12
SMNDC1-203ENST00000460483 ADGRB3O60242 1522 aa15.83■□□□□ 0.12
SMNDC1-203ENST00000460483 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
SMNDC1-203ENST00000460483 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
SMNDC1-203ENST00000460483 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
SMNDC1-203ENST00000460483 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
SMNDC1-203ENST00000460483 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
SMNDC1-203ENST00000460483 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
SMNDC1-203ENST00000460483 BCANQ96GW7 911 aa15.8■□□□□ 0.12
SMNDC1-203ENST00000460483 SPATA31E1Q6ZUB1 1445 aa15.79■□□□□ 0.12
SMNDC1-203ENST00000460483 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
SMNDC1-203ENST00000460483 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
SMNDC1-203ENST00000460483 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
SMNDC1-203ENST00000460483 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
SMNDC1-203ENST00000460483 RIMS2Q9UQ26 1411 aa15.77■□□□□ 0.12
SMNDC1-203ENST00000460483 LMTK3Q96Q04 1460 aa15.77■□□□□ 0.11
SMNDC1-203ENST00000460483 SLIT1O75093 1534 aa15.76■□□□□ 0.11
SMNDC1-203ENST00000460483 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
SMNDC1-203ENST00000460483 ZFYVE9O95405 1425 aa15.76■□□□□ 0.11
SMNDC1-203ENST00000460483 L3MBTL2Q969R5 705 aa15.75■□□□□ 0.11
SMNDC1-203ENST00000460483 TMEM131LA2VDJ0 1609 aa15.75■□□□□ 0.11
SMNDC1-203ENST00000460483 SCAF11Q99590 1463 aaKnown RBP15.74■□□□□ 0.11
SMNDC1-203ENST00000460483 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
SMNDC1-203ENST00000460483 KIF1BO60333 1816 aa15.73■□□□□ 0.11
SMNDC1-203ENST00000460483 HSPA2P54652 639 aa15.73■□□□□ 0.11
SMNDC1-203ENST00000460483 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
SMNDC1-203ENST00000460483 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
SMNDC1-203ENST00000460483 PLEKHG1Q9ULL1 1385 aa15.72■□□□□ 0.11
SMNDC1-203ENST00000460483 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
SMNDC1-203ENST00000460483 MYOM2P54296 1465 aa15.71■□□□□ 0.1
SMNDC1-203ENST00000460483 LTKP29376 864 aa15.7■□□□□ 0.1
SMNDC1-203ENST00000460483 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
SMNDC1-203ENST00000460483 NPHP4O75161 1426 aaPredicted RBP15.68■□□□□ 0.1
SMNDC1-203ENST00000460483 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
SMNDC1-203ENST00000460483 MED14O60244 1454 aa15.67■□□□□ 0.1
SMNDC1-203ENST00000460483 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
SMNDC1-203ENST00000460483 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
SMNDC1-203ENST00000460483 NEXMIFQ5QGS0 1516 aa15.66■□□□□ 0.1
SMNDC1-203ENST00000460483 ADGRF5Q8IZF2 1346 aa15.66■□□□□ 0.1
SMNDC1-203ENST00000460483 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
SMNDC1-203ENST00000460483 PIK3C2GO75747 1445 aa15.63■□□□□ 0.09
SMNDC1-203ENST00000460483 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
SMNDC1-203ENST00000460483 PRAG1Q86YV5 1406 aa15.62■□□□□ 0.09
SMNDC1-203ENST00000460483 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
SMNDC1-203ENST00000460483 NRXN1Q9ULB1 1477 aa15.62■□□□□ 0.09
SMNDC1-203ENST00000460483 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
SMNDC1-203ENST00000460483 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
SMNDC1-203ENST00000460483 SETBP1Q9Y6X0 1596 aa15.6■□□□□ 0.09
SMNDC1-203ENST00000460483 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
SMNDC1-203ENST00000460483 ROCK2O75116 1388 aaKnown RBP15.59■□□□□ 0.09
SMNDC1-203ENST00000460483 KCNA6P17658 529 aa15.57■□□□□ 0.08
SMNDC1-203ENST00000460483 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
SMNDC1-203ENST00000460483 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
SMNDC1-203ENST00000460483 PPLO60437 1756 aa15.57■□□□□ 0.08
SMNDC1-203ENST00000460483 SIRT1Q96EB6 747 aa15.56■□□□□ 0.08
SMNDC1-203ENST00000460483 ADAMTS13Q76LX8 1427 aa15.56■□□□□ 0.08
SMNDC1-203ENST00000460483 LAMC1P11047 1609 aa15.56■□□□□ 0.08
SMNDC1-203ENST00000460483 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
SMNDC1-203ENST00000460483 AMOTL2Q9Y2J4 779 aa15.55■□□□□ 0.08
SMNDC1-203ENST00000460483 IQGAP1P46940 1657 aa15.54■□□□□ 0.08
SMNDC1-203ENST00000460483 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
SMNDC1-203ENST00000460483 LRPPRCP42704 1394 aaKnown RBP15.53■□□□□ 0.08
SMNDC1-203ENST00000460483 ABCC11Q96J66 1382 aa15.53■□□□□ 0.08
SMNDC1-203ENST00000460483 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
SMNDC1-203ENST00000460483 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
SMNDC1-203ENST00000460483 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.08
SMNDC1-203ENST00000460483 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
SMNDC1-203ENST00000460483 POGKQ9P215 609 aa15.52■□□□□ 0.08
SMNDC1-203ENST00000460483 MYO5BQ9ULV0 1848 aa15.52■□□□□ 0.07
SMNDC1-203ENST00000460483 METP08581 1390 aa15.51■□□□□ 0.07
SMNDC1-203ENST00000460483 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
SMNDC1-203ENST00000460483 STK26Q9P289 416 aa15.51■□□□□ 0.07
SMNDC1-203ENST00000460483 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
SMNDC1-203ENST00000460483 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
SMNDC1-203ENST00000460483 NBPF1Q3BBV0 1214 aa15.5■□□□□ 0.07
SMNDC1-203ENST00000460483 KIAA1210Q9ULL0 1709 aa15.49■□□□□ 0.07
SMNDC1-203ENST00000460483 EIF4G2P78344 907 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMNDC1-203ENST00000460483 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
SMNDC1-203ENST00000460483 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
SMNDC1-203ENST00000460483 NKTRP30414 1462 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms