RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 KDM5AP29375 1690 aaKnown RBP21.96■■□□□ 1.11
CMTM3-203ENST00000460097 CCDC144AA2RUR9 1427 aa21.95■■□□□ 1.11
CMTM3-203ENST00000460097 TMEM2Q9UHN6 1383 aa21.95■■□□□ 1.1
CMTM3-203ENST00000460097 CLTCL1P53675 1640 aa21.95■■□□□ 1.1
CMTM3-203ENST00000460097 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
CMTM3-203ENST00000460097 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
CMTM3-203ENST00000460097 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
CMTM3-203ENST00000460097 TXNDC2Q86VQ3 553 aa21.94■■□□□ 1.1
CMTM3-203ENST00000460097 TMEM131LA2VDJ0 1609 aa21.94■■□□□ 1.1
CMTM3-203ENST00000460097 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
CMTM3-203ENST00000460097 STRCQ7RTU9 1775 aa21.92■■□□□ 1.1
CMTM3-203ENST00000460097 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
CMTM3-203ENST00000460097 SLIT1O75093 1534 aa21.91■■□□□ 1.1
CMTM3-203ENST00000460097 ARHGAP23Q9P227 1491 aa21.91■■□□□ 1.1
CMTM3-203ENST00000460097 NEFLP07196 543 aa21.91■■□□□ 1.1
CMTM3-203ENST00000460097 LTKP29376 864 aa21.91■■□□□ 1.1
CMTM3-203ENST00000460097 FKBP8Q14318 412 aa21.9■■□□□ 1.1
CMTM3-203ENST00000460097 BCL11AQ9H165 835 aa21.89■■□□□ 1.09
CMTM3-203ENST00000460097 KIF1BO60333 1816 aa21.88■■□□□ 1.09
CMTM3-203ENST00000460097 MYO5BQ9ULV0 1848 aa21.88■■□□□ 1.09
CMTM3-203ENST00000460097 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
CMTM3-203ENST00000460097 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
CMTM3-203ENST00000460097 SCAF11Q99590 1463 aaKnown RBP21.87■■□□□ 1.09
CMTM3-203ENST00000460097 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
CMTM3-203ENST00000460097 RBM19Q9Y4C8 960 aaKnown RBP21.85■■□□□ 1.09
CMTM3-203ENST00000460097 ZFYVE9O95405 1425 aa21.85■■□□□ 1.09
CMTM3-203ENST00000460097 NUTM2DQ5VT03 806 aaPredicted RBP21.84■■□□□ 1.09
CMTM3-203ENST00000460097 MED14O60244 1454 aa21.84■■□□□ 1.09
CMTM3-203ENST00000460097 POLR1AO95602 1720 aaPredicted RBP21.84■■□□□ 1.09
CMTM3-203ENST00000460097 NPHP4O75161 1426 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-203ENST00000460097 RPGRIP1LQ68CZ1 1315 aa21.83■■□□□ 1.08
CMTM3-203ENST00000460097 SPATA31E1Q6ZUB1 1445 aa21.82■■□□□ 1.08
CMTM3-203ENST00000460097 NEURL4Q96JN8 1562 aa21.82■■□□□ 1.08
CMTM3-203ENST00000460097 BCANQ96GW7 911 aa21.81■■□□□ 1.08
CMTM3-203ENST00000460097 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
CMTM3-203ENST00000460097 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-203ENST00000460097 ANP32CO43423 234 aa21.78■■□□□ 1.08
CMTM3-203ENST00000460097 PLEKHG1Q9ULL1 1385 aa21.77■■□□□ 1.08
CMTM3-203ENST00000460097 ERICH6BQ5W0A0 696 aa21.76■■□□□ 1.07
CMTM3-203ENST00000460097 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
CMTM3-203ENST00000460097 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
CMTM3-203ENST00000460097 FANCIQ9NVI1 1328 aa21.76■■□□□ 1.07
CMTM3-203ENST00000460097 SIN3AQ96ST3 1273 aa21.76■■□□□ 1.07
CMTM3-203ENST00000460097 IQGAP1P46940 1657 aa21.76■■□□□ 1.07
CMTM3-203ENST00000460097 SLC26A8Q96RN1 970 aa21.74■■□□□ 1.07
CMTM3-203ENST00000460097 TBX22Q9Y458 520 aa21.7■■□□□ 1.06
CMTM3-203ENST00000460097 DCAF11Q8TEB1 546 aa21.69■■□□□ 1.06
CMTM3-203ENST00000460097 PPLO60437 1756 aa21.69■■□□□ 1.06
CMTM3-203ENST00000460097 ADGRF5Q8IZF2 1346 aa21.68■■□□□ 1.06
CMTM3-203ENST00000460097 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
CMTM3-203ENST00000460097 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
CMTM3-203ENST00000460097 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
CMTM3-203ENST00000460097 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
CMTM3-203ENST00000460097 IFT172Q9UG01 1749 aa21.64■■□□□ 1.05
CMTM3-203ENST00000460097 SETBP1Q9Y6X0 1596 aa21.64■■□□□ 1.05
CMTM3-203ENST00000460097 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
CMTM3-203ENST00000460097 KCNA6P17658 529 aa21.61■■□□□ 1.05
CMTM3-203ENST00000460097 MYOM2P54296 1465 aa21.61■■□□□ 1.05
CMTM3-203ENST00000460097 DIP2AQ14689 1571 aa21.61■■□□□ 1.05
CMTM3-203ENST00000460097 NRXN3Q9Y4C0 1643 aa21.6■■□□□ 1.05
CMTM3-203ENST00000460097 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
CMTM3-203ENST00000460097 PIK3C2GO75747 1445 aa21.59■■□□□ 1.05
CMTM3-203ENST00000460097 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.04
CMTM3-203ENST00000460097 LTBP4Q8N2S1 1624 aa21.57■■□□□ 1.04
CMTM3-203ENST00000460097 ALKQ9UM73 1620 aa21.57■■□□□ 1.04
CMTM3-203ENST00000460097 METP08581 1390 aa21.57■■□□□ 1.04
CMTM3-203ENST00000460097 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
CMTM3-203ENST00000460097 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
CMTM3-203ENST00000460097 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
CMTM3-203ENST00000460097 AMOTL2Q9Y2J4 779 aa21.56■■□□□ 1.04
CMTM3-203ENST00000460097 CERKQ8TCT0 537 aa21.55■■□□□ 1.04
CMTM3-203ENST00000460097 CPS1P31327 1500 aa21.54■■□□□ 1.04
CMTM3-203ENST00000460097 MSH5O43196 834 aa21.53■■□□□ 1.04
CMTM3-203ENST00000460097 PTPRUQ92729 1446 aa21.52■■□□□ 1.04
CMTM3-203ENST00000460097 CHD2O14647 1828 aaKnown RBP21.52■■□□□ 1.04
CMTM3-203ENST00000460097 STRCP1A6NGW2 1772 aa21.52■■□□□ 1.04
CMTM3-203ENST00000460097 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
CMTM3-203ENST00000460097 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-203ENST00000460097 SETD1AO15047 1707 aaKnown RBP21.49■■□□□ 1.03
CMTM3-203ENST00000460097 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
CMTM3-203ENST00000460097 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
CMTM3-203ENST00000460097 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
CMTM3-203ENST00000460097 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
CMTM3-203ENST00000460097 STK26Q9P289 416 aa21.46■■□□□ 1.03
CMTM3-203ENST00000460097 LAMC1P11047 1609 aa21.46■■□□□ 1.03
CMTM3-203ENST00000460097 RBM33Q96EV2 1170 aaKnown RBP21.46■■□□□ 1.03
CMTM3-203ENST00000460097 TMEM94Q12767 1356 aa21.45■■□□□ 1.02
CMTM3-203ENST00000460097 LRPPRCP42704 1394 aaKnown RBP21.44■■□□□ 1.02
CMTM3-203ENST00000460097 PPP4R2Q9NY27 417 aa21.43■■□□□ 1.02
CMTM3-203ENST00000460097 YTHDC2Q9H6S0 1430 aaKnown RBP21.43■■□□□ 1.02
CMTM3-203ENST00000460097 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
CMTM3-203ENST00000460097 XRN1Q8IZH2 1706 aaKnown RBP21.42■■□□□ 1.02
CMTM3-203ENST00000460097 ASXL1Q8IXJ9 1541 aa21.42■■□□□ 1.02
CMTM3-203ENST00000460097 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
CMTM3-203ENST00000460097 NBPF1Q3BBV0 1214 aa21.41■■□□□ 1.02
CMTM3-203ENST00000460097 NBPF8Q3BBV2 869 aa21.41■■□□□ 1.02
CMTM3-203ENST00000460097 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
CMTM3-203ENST00000460097 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
CMTM3-203ENST00000460097 ROBO2Q9HCK4 1378 aa21.39■■□□□ 1.02
CMTM3-203ENST00000460097 ADGRB1O14514 1584 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms