RNA–Protein interactions for RNA: ENST00000459730.1

RPL35AP28-201, Transcript of ribosomal protein L35a pseudogene 28, humanhuman

BASIC

Gene RPL35AP28, Length 331 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP28-201ENST00000459730 COLQQ9Y215 455 aaPredicted RBP8.74□□□□□ -1.01
RPL35AP28-201ENST00000459730 ITSN2Q9NZM3 1697 aa8.74□□□□□ -1.01
RPL35AP28-201ENST00000459730 DNMT1P26358 1616 aaKnown RBP8.73□□□□□ -1.01
RPL35AP28-201ENST00000459730 IER5LQ5T953 404 aa8.73□□□□□ -1.01
RPL35AP28-201ENST00000459730 POLR1AO95602 1720 aaPredicted RBP8.73□□□□□ -1.01
RPL35AP28-201ENST00000459730 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
RPL35AP28-201ENST00000459730 CDC42BPBQ9Y5S2 1711 aa8.72□□□□□ -1.01
RPL35AP28-201ENST00000459730 IRX5P78411 483 aaPredicted RBP8.72□□□□□ -1.01
RPL35AP28-201ENST00000459730 CABP2Q9NPB3 220 aa8.72□□□□□ -1.01
RPL35AP28-201ENST00000459730 A2ML1A8K2U0 1454 aa8.7□□□□□ -1.02
RPL35AP28-201ENST00000459730 RNF17Q9BXT8 1623 aaKnown RBP8.7□□□□□ -1.02
RPL35AP28-201ENST00000459730 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
RPL35AP28-201ENST00000459730 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
RPL35AP28-201ENST00000459730 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
RPL35AP28-201ENST00000459730 SAMD9LQ8IVG5 1584 aa8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 LHX8Q68G74 356 aa8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 PLXNC1O60486 1568 aa8.69□□□□□ -1.02
RPL35AP28-201ENST00000459730 EFCAB3Q8N7B9 438 aa8.68□□□□□ -1.02
RPL35AP28-201ENST00000459730 TROQ12816 1431 aaPredicted RBP8.68□□□□□ -1.02
RPL35AP28-201ENST00000459730 PDCD7Q8N8D1 485 aaKnown RBP8.67□□□□□ -1.02
RPL35AP28-201ENST00000459730 SYCP2Q9BX26 1530 aa8.67□□□□□ -1.02
RPL35AP28-201ENST00000459730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPL35AP28-201ENST00000459730 STK25O00506 426 aa8.66□□□□□ -1.02
RPL35AP28-201ENST00000459730 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
RPL35AP28-201ENST00000459730 STK24Q9Y6E0 443 aa8.66□□□□□ -1.02
RPL35AP28-201ENST00000459730 NPHP4O75161 1426 aaPredicted RBP8.65□□□□□ -1.02
RPL35AP28-201ENST00000459730 GOLGA2Q08379 1002 aa8.65□□□□□ -1.02
RPL35AP28-201ENST00000459730 FBXO31Q5XUX0 539 aaPredicted RBP8.65□□□□□ -1.02
RPL35AP28-201ENST00000459730 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
RPL35AP28-201ENST00000459730 INO80Q9ULG1 1556 aaPredicted RBP8.65□□□□□ -1.03
RPL35AP28-201ENST00000459730 ATP7AQ04656 1500 aa8.64□□□□□ -1.03
RPL35AP28-201ENST00000459730 SEC24BO95487 1268 aa8.64□□□□□ -1.03
RPL35AP28-201ENST00000459730 GGT6Q6P531 493 aa8.64□□□□□ -1.03
RPL35AP28-201ENST00000459730 IQGAP1P46940 1657 aa8.64□□□□□ -1.03
RPL35AP28-201ENST00000459730 SYNMO15061 1565 aa8.64□□□□□ -1.03
RPL35AP28-201ENST00000459730 CDC42BPAQ5VT25 1732 aa8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 TNRQ92752 1358 aa8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 PLCG2P16885 1265 aa8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 A2MP01023 1474 aa8.63□□□□□ -1.03
RPL35AP28-201ENST00000459730 XIRP1Q702N8 1843 aaKnown RBP8.62□□□□□ -1.03
RPL35AP28-201ENST00000459730 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
RPL35AP28-201ENST00000459730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.03
RPL35AP28-201ENST00000459730 CLIP1P30622 1438 aa8.62□□□□□ -1.03
RPL35AP28-201ENST00000459730 SPAG9O60271 1321 aaKnown RBP8.61□□□□□ -1.03
RPL35AP28-201ENST00000459730 ZNF777Q9ULD5 760 aaPredicted RBP8.61□□□□□ -1.03
RPL35AP28-201ENST00000459730 MED14O60244 1454 aa8.61□□□□□ -1.03
RPL35AP28-201ENST00000459730 DEPDC5O75140 1603 aa8.61□□□□□ -1.03
RPL35AP28-201ENST00000459730 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 HNRNPMP52272 730 aaKnown RBP eCLIP8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 PHF8Q9UPP1 1060 aa8.6□□□□□ -1.03
RPL35AP28-201ENST00000459730 ZC3H13Q5T200 1668 aaKnown RBP8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 LRP6O75581 1613 aa8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 CHGAP10645 457 aaKnown RBP8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 ANKLE2Q86XL3 938 aa8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 UGGT1Q9NYU2 1555 aa8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 ROBO1Q9Y6N7 1651 aa8.59□□□□□ -1.03
RPL35AP28-201ENST00000459730 PZPP20742 1482 aa8.58□□□□□ -1.04
RPL35AP28-201ENST00000459730 SOX12O15370 315 aa8.58□□□□□ -1.04
RPL35AP28-201ENST00000459730 FBXO22Q8NEZ5 403 aa8.58□□□□□ -1.04
RPL35AP28-201ENST00000459730 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
RPL35AP28-201ENST00000459730 RBM33Q96EV2 1170 aaKnown RBP8.57□□□□□ -1.04
RPL35AP28-201ENST00000459730 CDK11AQ9UQ88 783 aaPredicted RBP8.57□□□□□ -1.04
RPL35AP28-201ENST00000459730 KDM5DQ9BY66 1539 aa8.56□□□□□ -1.04
RPL35AP28-201ENST00000459730 FAM135AQ9P2D6 1515 aa8.56□□□□□ -1.04
RPL35AP28-201ENST00000459730 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
RPL35AP28-201ENST00000459730 MAP3K1Q13233 1512 aa8.55□□□□□ -1.04
RPL35AP28-201ENST00000459730 GPATCH8Q9UKJ3 1502 aaKnown RBP8.55□□□□□ -1.04
RPL35AP28-201ENST00000459730 ADGBQ8N7X0 1667 aa8.55□□□□□ -1.04
RPL35AP28-201ENST00000459730 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
RPL35AP28-201ENST00000459730 MIA2Q96PC5 1412 aa8.54□□□□□ -1.04
RPL35AP28-201ENST00000459730 NLRP1Q9C000 1473 aa8.53□□□□□ -1.04
RPL35AP28-201ENST00000459730 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
RPL35AP28-201ENST00000459730 TMEM94Q12767 1356 aa8.52□□□□□ -1.05
RPL35AP28-201ENST00000459730 THEMISQ8N1K5 641 aaPredicted RBP8.52□□□□□ -1.05
RPL35AP28-201ENST00000459730 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 SCAF11Q99590 1463 aaKnown RBP8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 COL16A1Q07092 1604 aaPredicted RBP8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 LTKP29376 864 aa8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 NLRP6P59044 892 aa8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 NCOA2Q15596 1464 aa8.51□□□□□ -1.05
RPL35AP28-201ENST00000459730 KIF3BO15066 747 aa8.5□□□□□ -1.05
RPL35AP28-201ENST00000459730 UBR1Q8IWV7 1749 aa8.5□□□□□ -1.05
RPL35AP28-201ENST00000459730 KIAA1107Q9UPP5 1409 aa8.5□□□□□ -1.05
RPL35AP28-201ENST00000459730 RGS12O14924 1447 aa8.49□□□□□ -1.05
RPL35AP28-201ENST00000459730 MAMSTRQ6ZN01 415 aa8.49□□□□□ -1.05
RPL35AP28-201ENST00000459730 TMEM121BQ9BXQ6 578 aaPredicted RBP8.49□□□□□ -1.05
RPL35AP28-201ENST00000459730 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
RPL35AP28-201ENST00000459730 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms