RNA–Protein interactions for RNA: ENST00000459730.1

RPL35AP28-201, Transcript of ribosomal protein L35a pseudogene 28, humanhuman

BASIC

Gene RPL35AP28, Length 331 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP28-201ENST00000459730 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
RPL35AP28-201ENST00000459730 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
RPL35AP28-201ENST00000459730 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
RPL35AP28-201ENST00000459730 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
RPL35AP28-201ENST00000459730 FOXD1Q16676 465 aa14.35□□□□□ -0.11
RPL35AP28-201ENST00000459730 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
RPL35AP28-201ENST00000459730 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
RPL35AP28-201ENST00000459730 ADRA2BP18089 450 aa13.68□□□□□ -0.22
RPL35AP28-201ENST00000459730 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
RPL35AP28-201ENST00000459730 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
RPL35AP28-201ENST00000459730 MSH5O43196 834 aa13.21□□□□□ -0.29
RPL35AP28-201ENST00000459730 ABCC9O60706 1549 aa12.79□□□□□ -0.36
RPL35AP28-201ENST00000459730 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
RPL35AP28-201ENST00000459730 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
RPL35AP28-201ENST00000459730 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
RPL35AP28-201ENST00000459730 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
RPL35AP28-201ENST00000459730 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
RPL35AP28-201ENST00000459730 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
RPL35AP28-201ENST00000459730 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
RPL35AP28-201ENST00000459730 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
RPL35AP28-201ENST00000459730 KCNA4P22459 653 aa12.09□□□□□ -0.47
RPL35AP28-201ENST00000459730 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
RPL35AP28-201ENST00000459730 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
RPL35AP28-201ENST00000459730 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
RPL35AP28-201ENST00000459730 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
RPL35AP28-201ENST00000459730 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
RPL35AP28-201ENST00000459730 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPL35AP28-201ENST00000459730 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
RPL35AP28-201ENST00000459730 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
RPL35AP28-201ENST00000459730 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
RPL35AP28-201ENST00000459730 NACADO15069 1562 aa11.62□□□□□ -0.55
RPL35AP28-201ENST00000459730 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
RPL35AP28-201ENST00000459730 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
RPL35AP28-201ENST00000459730 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
RPL35AP28-201ENST00000459730 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
RPL35AP28-201ENST00000459730 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
RPL35AP28-201ENST00000459730 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
RPL35AP28-201ENST00000459730 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
RPL35AP28-201ENST00000459730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.59
RPL35AP28-201ENST00000459730 EIF4G1Q04637 1599 aaKnown RBP11.34□□□□□ -0.59
RPL35AP28-201ENST00000459730 MYO15BQ96JP2 1530 aa11.26□□□□□ -0.61
RPL35AP28-201ENST00000459730 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
RPL35AP28-201ENST00000459730 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
RPL35AP28-201ENST00000459730 SCRIBQ14160 1630 aa11.23□□□□□ -0.61
RPL35AP28-201ENST00000459730 ZBTB22O15209 634 aa11.18□□□□□ -0.62
RPL35AP28-201ENST00000459730 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
RPL35AP28-201ENST00000459730 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
RPL35AP28-201ENST00000459730 CUX2O14529 1486 aa11.11□□□□□ -0.63
RPL35AP28-201ENST00000459730 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
RPL35AP28-201ENST00000459730 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
RPL35AP28-201ENST00000459730 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
RPL35AP28-201ENST00000459730 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
RPL35AP28-201ENST00000459730 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
RPL35AP28-201ENST00000459730 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
RPL35AP28-201ENST00000459730 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
RPL35AP28-201ENST00000459730 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
RPL35AP28-201ENST00000459730 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
RPL35AP28-201ENST00000459730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
RPL35AP28-201ENST00000459730 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
RPL35AP28-201ENST00000459730 SAMD1Q6SPF0 538 aaPredicted RBP10.91□□□□□ -0.66
RPL35AP28-201ENST00000459730 NESP48681 1621 aa10.89□□□□□ -0.67
RPL35AP28-201ENST00000459730 CAPN15O75808 1086 aa10.86□□□□□ -0.67
RPL35AP28-201ENST00000459730 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
RPL35AP28-201ENST00000459730 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
RPL35AP28-201ENST00000459730 APLP2Q06481 763 aa10.81□□□□□ -0.68
RPL35AP28-201ENST00000459730 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
RPL35AP28-201ENST00000459730 DSG3P32926 999 aa10.77□□□□□ -0.69
RPL35AP28-201ENST00000459730 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
RPL35AP28-201ENST00000459730 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
RPL35AP28-201ENST00000459730 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
RPL35AP28-201ENST00000459730 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
RPL35AP28-201ENST00000459730 ATAD2BQ9ULI0 1458 aa10.72□□□□□ -0.69
RPL35AP28-201ENST00000459730 KIF21AQ7Z4S6 1674 aa10.69□□□□□ -0.7
RPL35AP28-201ENST00000459730 ABCB7O75027 752 aa10.69□□□□□ -0.7
RPL35AP28-201ENST00000459730 HMGXB3Q12766 1538 aa10.66□□□□□ -0.7
RPL35AP28-201ENST00000459730 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
RPL35AP28-201ENST00000459730 SMARCA4P51532 1647 aa10.6□□□□□ -0.71
RPL35AP28-201ENST00000459730 POLA2Q14181 598 aa10.59□□□□□ -0.71
RPL35AP28-201ENST00000459730 LAMC3Q9Y6N6 1575 aa10.58□□□□□ -0.72
RPL35AP28-201ENST00000459730 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
RPL35AP28-201ENST00000459730 MRC2Q9UBG0 1479 aa10.54□□□□□ -0.72
RPL35AP28-201ENST00000459730 WDR62O43379 1518 aa10.53□□□□□ -0.72
RPL35AP28-201ENST00000459730 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
RPL35AP28-201ENST00000459730 RIMBP3CA6NJZ7 1639 aa10.52□□□□□ -0.73
RPL35AP28-201ENST00000459730 RIMBP3BA6NNM3 1639 aa10.52□□□□□ -0.73
RPL35AP28-201ENST00000459730 RIMBP3Q9UFD9 1639 aa10.52□□□□□ -0.73
RPL35AP28-201ENST00000459730 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
RPL35AP28-201ENST00000459730 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
RPL35AP28-201ENST00000459730 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
RPL35AP28-201ENST00000459730 CADPSQ9ULU8 1353 aa10.41□□□□□ -0.74
RPL35AP28-201ENST00000459730 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
RPL35AP28-201ENST00000459730 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
RPL35AP28-201ENST00000459730 MKRN4PQ13434 485 aaPredicted RBP10.35□□□□□ -0.75
RPL35AP28-201ENST00000459730 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
RPL35AP28-201ENST00000459730 URB2Q14146 1524 aaKnown RBP10.34□□□□□ -0.75
RPL35AP28-201ENST00000459730 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
RPL35AP28-201ENST00000459730 ZBTB12Q9Y330 459 aaPredicted RBP10.34□□□□□ -0.75
RPL35AP28-201ENST00000459730 ARAP1Q96P48 1450 aa10.33□□□□□ -0.76
RPL35AP28-201ENST00000459730 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
RPL35AP28-201ENST00000459730 WIZO95785 1651 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms