RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PRDM15P57071 1507 aaPredicted RBP13.24□□□□□ -0.29
CLIP4-208ENST00000456385 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
CLIP4-208ENST00000456385 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
CLIP4-208ENST00000456385 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
CLIP4-208ENST00000456385 GOLGA6L3A6NEY3 463 aa13.23□□□□□ -0.29
CLIP4-208ENST00000456385 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
CLIP4-208ENST00000456385 CDC42BPAQ5VT25 1732 aa13.23□□□□□ -0.29
CLIP4-208ENST00000456385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLIP4-208ENST00000456385 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
CLIP4-208ENST00000456385 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
CLIP4-208ENST00000456385 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
CLIP4-208ENST00000456385 SHANK2Q9UPX8 1470 aa13.22□□□□□ -0.29
CLIP4-208ENST00000456385 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
CLIP4-208ENST00000456385 FSD2A1L4K1 749 aa13.21□□□□□ -0.29
CLIP4-208ENST00000456385 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
CLIP4-208ENST00000456385 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
CLIP4-208ENST00000456385 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
CLIP4-208ENST00000456385 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
CLIP4-208ENST00000456385 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
CLIP4-208ENST00000456385 E9PSI1 815 aa13.19□□□□□ -0.3
CLIP4-208ENST00000456385 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
CLIP4-208ENST00000456385 CLCN1P35523 988 aa13.19□□□□□ -0.3
CLIP4-208ENST00000456385 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
CLIP4-208ENST00000456385 MCM4P33991 863 aa13.18□□□□□ -0.3
CLIP4-208ENST00000456385 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CLIP4-208ENST00000456385 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
CLIP4-208ENST00000456385 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
CLIP4-208ENST00000456385 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
CLIP4-208ENST00000456385 CLASP1Q7Z460 1538 aa13.17□□□□□ -0.3
CLIP4-208ENST00000456385 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-208ENST00000456385 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
CLIP4-208ENST00000456385 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
CLIP4-208ENST00000456385 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
CLIP4-208ENST00000456385 CENPJQ9HC77 1338 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-208ENST00000456385 LAMC1P11047 1609 aa13.16□□□□□ -0.3
CLIP4-208ENST00000456385 HSP90AA1P07900 732 aaKnown RBP13.16□□□□□ -0.3
CLIP4-208ENST00000456385 TRAK2O60296 914 aa13.15□□□□□ -0.3
CLIP4-208ENST00000456385 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
CLIP4-208ENST00000456385 RLBP1P12271 317 aa13.14□□□□□ -0.31
CLIP4-208ENST00000456385 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
CLIP4-208ENST00000456385 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
CLIP4-208ENST00000456385 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
CLIP4-208ENST00000456385 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
CLIP4-208ENST00000456385 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
CLIP4-208ENST00000456385 CCDC141Q6ZP82 1450 aa13.13□□□□□ -0.31
CLIP4-208ENST00000456385 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
CLIP4-208ENST00000456385 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
CLIP4-208ENST00000456385 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
CLIP4-208ENST00000456385 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
CLIP4-208ENST00000456385 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
CLIP4-208ENST00000456385 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
CLIP4-208ENST00000456385 MRE11P49959 708 aa13.11□□□□□ -0.31
CLIP4-208ENST00000456385 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
CLIP4-208ENST00000456385 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
CLIP4-208ENST00000456385 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
CLIP4-208ENST00000456385 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
CLIP4-208ENST00000456385 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
CLIP4-208ENST00000456385 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
CLIP4-208ENST00000456385 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
CLIP4-208ENST00000456385 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
CLIP4-208ENST00000456385 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
CLIP4-208ENST00000456385 NUP160Q12769 1436 aa13.1□□□□□ -0.31
CLIP4-208ENST00000456385 ESPNB1AK53 854 aa13.1□□□□□ -0.31
CLIP4-208ENST00000456385 ATP10BO94823 1461 aa13.09□□□□□ -0.31
CLIP4-208ENST00000456385 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
CLIP4-208ENST00000456385 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.31
CLIP4-208ENST00000456385 FBLN2P98095 1184 aa13.08□□□□□ -0.32
CLIP4-208ENST00000456385 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
CLIP4-208ENST00000456385 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
CLIP4-208ENST00000456385 SYNMO15061 1565 aa13.07□□□□□ -0.32
CLIP4-208ENST00000456385 RTEL1-TNFRSF6BF6WH68 1400 aa13.07□□□□□ -0.32
CLIP4-208ENST00000456385 RNF17Q9BXT8 1623 aaKnown RBP13.06□□□□□ -0.32
CLIP4-208ENST00000456385 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
CLIP4-208ENST00000456385 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
CLIP4-208ENST00000456385 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-208ENST00000456385 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-208ENST00000456385 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-208ENST00000456385 CARD14Q9BXL6 1004 aa13.06□□□□□ -0.32
CLIP4-208ENST00000456385 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
CLIP4-208ENST00000456385 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
CLIP4-208ENST00000456385 ABCA8O94911 1581 aa13.05□□□□□ -0.32
CLIP4-208ENST00000456385 PLXNC1O60486 1568 aa13.04□□□□□ -0.32
CLIP4-208ENST00000456385 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
CLIP4-208ENST00000456385 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
CLIP4-208ENST00000456385 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
CLIP4-208ENST00000456385 MYOM1P52179 1685 aa13.03□□□□□ -0.32
CLIP4-208ENST00000456385 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
CLIP4-208ENST00000456385 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
CLIP4-208ENST00000456385 UNC13BO14795 1591 aa13.03□□□□□ -0.32
CLIP4-208ENST00000456385 HSCBQ8IWL3 235 aa13.02□□□□□ -0.32
CLIP4-208ENST00000456385 NGEFQ8N5V2 710 aa13.02□□□□□ -0.32
CLIP4-208ENST00000456385 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.32
CLIP4-208ENST00000456385 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.33
CLIP4-208ENST00000456385 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
CLIP4-208ENST00000456385 IQGAP1P46940 1657 aa13.02□□□□□ -0.33
CLIP4-208ENST00000456385 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
CLIP4-208ENST00000456385 AAMPQ13685 434 aa13.01□□□□□ -0.33
CLIP4-208ENST00000456385 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
CLIP4-208ENST00000456385 TNPO1Q92973 898 aaKnown RBP13.01□□□□□ -0.33
CLIP4-208ENST00000456385 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms