RNA–Protein interactions for RNA: ENST00000455959.7

SEC11A-202, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SEC11A, Length 1,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-202ENST00000455959 GOLGA3Q08378 1498 aa12.67□□□□□ -0.38
SEC11A-202ENST00000455959 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
SEC11A-202ENST00000455959 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
SEC11A-202ENST00000455959 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
SEC11A-202ENST00000455959 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
SEC11A-202ENST00000455959 NPATQ14207 1427 aa12.64□□□□□ -0.39
SEC11A-202ENST00000455959 POTEMA6NI47 508 aa12.64□□□□□ -0.39
SEC11A-202ENST00000455959 KIF3CO14782 793 aa12.64□□□□□ -0.39
SEC11A-202ENST00000455959 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
SEC11A-202ENST00000455959 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
SEC11A-202ENST00000455959 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
SEC11A-202ENST00000455959 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
SEC11A-202ENST00000455959 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
SEC11A-202ENST00000455959 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
SEC11A-202ENST00000455959 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
SEC11A-202ENST00000455959 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
SEC11A-202ENST00000455959 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
SEC11A-202ENST00000455959 SHANK2Q9UPX8 1470 aa12.61□□□□□ -0.39
SEC11A-202ENST00000455959 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
SEC11A-202ENST00000455959 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
SEC11A-202ENST00000455959 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
SEC11A-202ENST00000455959 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
SEC11A-202ENST00000455959 C3P01024 1663 aa12.58□□□□□ -0.4
SEC11A-202ENST00000455959 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
SEC11A-202ENST00000455959 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
SEC11A-202ENST00000455959 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
SEC11A-202ENST00000455959 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
SEC11A-202ENST00000455959 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
SEC11A-202ENST00000455959 AGLP35573 1532 aa12.54□□□□□ -0.4
SEC11A-202ENST00000455959 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
SEC11A-202ENST00000455959 FOXK1P85037 733 aa12.53□□□□□ -0.4
SEC11A-202ENST00000455959 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
SEC11A-202ENST00000455959 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
SEC11A-202ENST00000455959 EMP3P54852 163 aa12.52□□□□□ -0.41
SEC11A-202ENST00000455959 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
SEC11A-202ENST00000455959 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
SEC11A-202ENST00000455959 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
SEC11A-202ENST00000455959 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
SEC11A-202ENST00000455959 PDE4AP27815 886 aa12.51□□□□□ -0.41
SEC11A-202ENST00000455959 DSG2Q14126 1118 aa12.5□□□□□ -0.41
SEC11A-202ENST00000455959 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
SEC11A-202ENST00000455959 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
SEC11A-202ENST00000455959 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
SEC11A-202ENST00000455959 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
SEC11A-202ENST00000455959 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
SEC11A-202ENST00000455959 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
SEC11A-202ENST00000455959 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
SEC11A-202ENST00000455959 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
SEC11A-202ENST00000455959 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
SEC11A-202ENST00000455959 SLC34A2O95436 690 aa12.46□□□□□ -0.41
SEC11A-202ENST00000455959 RXRBP28702 533 aa12.46□□□□□ -0.41
SEC11A-202ENST00000455959 ARSIQ5FYB1 569 aa12.46□□□□□ -0.41
SEC11A-202ENST00000455959 ANKLE2Q86XL3 938 aa12.46□□□□□ -0.41
SEC11A-202ENST00000455959 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
SEC11A-202ENST00000455959 PLCH2O75038 1416 aa12.45□□□□□ -0.42
SEC11A-202ENST00000455959 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
SEC11A-202ENST00000455959 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
SEC11A-202ENST00000455959 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
SEC11A-202ENST00000455959 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
SEC11A-202ENST00000455959 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
SEC11A-202ENST00000455959 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
SEC11A-202ENST00000455959 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
SEC11A-202ENST00000455959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC11A-202ENST00000455959 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
SEC11A-202ENST00000455959 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
SEC11A-202ENST00000455959 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
SEC11A-202ENST00000455959 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.426e-6■■■□□ 15.8
SEC11A-202ENST00000455959 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
SEC11A-202ENST00000455959 LRRC7Q96NW7 1537 aa12.41□□□□□ -0.42
SEC11A-202ENST00000455959 ERBB3P21860 1342 aa12.4□□□□□ -0.42
SEC11A-202ENST00000455959 VWDEQ8N2E2 1590 aa12.4□□□□□ -0.42
SEC11A-202ENST00000455959 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
SEC11A-202ENST00000455959 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
SEC11A-202ENST00000455959 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
SEC11A-202ENST00000455959 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
SEC11A-202ENST00000455959 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
SEC11A-202ENST00000455959 A2ML1A8K2U0 1454 aa12.39□□□□□ -0.43
SEC11A-202ENST00000455959 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
SEC11A-202ENST00000455959 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
SEC11A-202ENST00000455959 MFSD10Q14728 455 aa12.37□□□□□ -0.43
SEC11A-202ENST00000455959 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-202ENST00000455959 JCADQ9P266 1359 aa12.37□□□□□ -0.43
SEC11A-202ENST00000455959 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
SEC11A-202ENST00000455959 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
SEC11A-202ENST00000455959 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
SEC11A-202ENST00000455959 TBC1D12O60347 775 aa12.36□□□□□ -0.43
SEC11A-202ENST00000455959 NUDT7P0C024 238 aa12.36□□□□□ -0.43
SEC11A-202ENST00000455959 KDM5CP41229 1560 aa12.35□□□□□ -0.43
SEC11A-202ENST00000455959 MED14O60244 1454 aa12.35□□□□□ -0.43
SEC11A-202ENST00000455959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
SEC11A-202ENST00000455959 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
SEC11A-202ENST00000455959 NPHP4O75161 1426 aaPredicted RBP12.35□□□□□ -0.43
SEC11A-202ENST00000455959 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
SEC11A-202ENST00000455959 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
SEC11A-202ENST00000455959 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
SEC11A-202ENST00000455959 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
SEC11A-202ENST00000455959 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
SEC11A-202ENST00000455959 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.43
SEC11A-202ENST00000455959 NEURL4Q96JN8 1562 aa12.33□□□□□ -0.44
SEC11A-202ENST00000455959 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms