RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 ZFYVE9O95405 1425 aa37.11■■■■□ 3.53
MSH2-203ENST00000454849 SETD5Q9C0A6 1442 aa37.11■■■■□ 3.53
MSH2-203ENST00000454849 UBAP1LF5GYI3 381 aa37.07■■■■□ 3.52
MSH2-203ENST00000454849 HDGFP51858 240 aaKnown RBP37.07■■■■□ 3.52
MSH2-203ENST00000454849 ZNF326Q5BKZ1 582 aaKnown RBP37.07■■■■□ 3.52
MSH2-203ENST00000454849 MPHOSPH9Q99550 1183 aa37.07■■■■□ 3.52
MSH2-203ENST00000454849 STRCP1A6NGW2 1772 aa37.06■■■■□ 3.52
MSH2-203ENST00000454849 CPS1P31327 1500 aa37.06■■■■□ 3.52
MSH2-203ENST00000454849 CLTCL1P53675 1640 aa37.04■■■■□ 3.52
MSH2-203ENST00000454849 IQSEC2Q5JU85 1478 aa37.04■■■■□ 3.52
MSH2-203ENST00000454849 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.03■■■■□ 3.52
MSH2-203ENST00000454849 TRPM2O94759 1503 aa37.02■■■■□ 3.52
MSH2-203ENST00000454849 RAB3GAP2Q9H2M9 1393 aa37.02■■■■□ 3.52
MSH2-203ENST00000454849 PLEKHG1Q9ULL1 1385 aa37■■■■□ 3.51
MSH2-203ENST00000454849 LRRC7Q96NW7 1537 aa36.95■■■■□ 3.51
MSH2-203ENST00000454849 RBM33Q96EV2 1170 aaKnown RBP36.94■■■■□ 3.5
MSH2-203ENST00000454849 KCNA6P17658 529 aa36.93■■■■□ 3.5
MSH2-203ENST00000454849 SCAF1Q9H7N4 1312 aaKnown RBP36.9■■■■□ 3.5
MSH2-203ENST00000454849 PIP4K2BP78356 416 aa36.9■■■■□ 3.5
MSH2-203ENST00000454849 TBX22Q9Y458 520 aa36.87■■■■□ 3.49
MSH2-203ENST00000454849 PROSER2Q86WR7 435 aaPredicted RBP36.86■■■■□ 3.49
MSH2-203ENST00000454849 ADAMTS13Q76LX8 1427 aa36.85■■■■□ 3.49
MSH2-203ENST00000454849 KIF1BO60333 1816 aa36.85■■■■□ 3.49
MSH2-203ENST00000454849 TOM1O60784 492 aa36.84■■■■□ 3.49
MSH2-203ENST00000454849 RGL3Q3MIN7 710 aa36.8■■■■□ 3.48
MSH2-203ENST00000454849 NEXMIFQ5QGS0 1516 aa36.8■■■■□ 3.48
MSH2-203ENST00000454849 TMEM94Q12767 1356 aa36.79■■■■□ 3.48
MSH2-203ENST00000454849 CCDC144AA2RUR9 1427 aa36.79■■■■□ 3.48
MSH2-203ENST00000454849 ACIN1Q9UKV3 1341 aaKnown RBP36.79■■■■□ 3.48
MSH2-203ENST00000454849 XIRP1Q702N8 1843 aaKnown RBP36.73■■■■□ 3.47
MSH2-203ENST00000454849 ALKQ9UM73 1620 aa36.71■■■■□ 3.47
MSH2-203ENST00000454849 NWD1Q149M9 1564 aa36.71■■■■□ 3.47
MSH2-203ENST00000454849 CHD2O14647 1828 aaKnown RBP36.71■■■■□ 3.47
MSH2-203ENST00000454849 NRXN3Q9Y4C0 1643 aa36.7■■■■□ 3.47
MSH2-203ENST00000454849 VGFO15240 615 aaPredicted RBP36.7■■■■□ 3.47
MSH2-203ENST00000454849 AMOTL2Q9Y2J4 779 aa36.7■■■■□ 3.47
MSH2-203ENST00000454849 PTPRUQ92729 1446 aa36.68■■■■□ 3.46
MSH2-203ENST00000454849 RPGRIP1LQ68CZ1 1315 aa36.68■■■■□ 3.46
MSH2-203ENST00000454849 METP08581 1390 aa36.67■■■■□ 3.46
MSH2-203ENST00000454849 DIP2AQ14689 1571 aa36.67■■■■□ 3.46
MSH2-203ENST00000454849 NKTRP30414 1462 aaKnown RBP36.67■■■■□ 3.46
MSH2-203ENST00000454849 SETBP1Q9Y6X0 1596 aa36.66■■■■□ 3.46
MSH2-203ENST00000454849 HRCP23327 699 aa36.66■■■■□ 3.46
MSH2-203ENST00000454849 SPATA31E1Q6ZUB1 1445 aa36.64■■■■□ 3.46
MSH2-203ENST00000454849 HSPA1LP34931 641 aa36.63■■■■□ 3.45
MSH2-203ENST00000454849 C14orf37Q86TY3 774 aa36.62■■■■□ 3.45
MSH2-203ENST00000454849 PIK3R4Q99570 1358 aa36.62■■■■□ 3.45
MSH2-203ENST00000454849 ADGRF5Q8IZF2 1346 aa36.6■■■■□ 3.45
MSH2-203ENST00000454849 PPLO60437 1756 aa36.58■■■■□ 3.45
MSH2-203ENST00000454849 ANKRD30BQ9BXX2 1392 aa36.57■■■■□ 3.45
MSH2-203ENST00000454849 MSH6P52701 1360 aa36.54■■■■□ 3.44
MSH2-203ENST00000454849 XRN1Q8IZH2 1706 aaKnown RBP36.46■■■■□ 3.43
MSH2-203ENST00000454849 SLAIN2Q9P270 581 aa36.45■■■■□ 3.43
MSH2-203ENST00000454849 C19orf44Q9H6X5 657 aa36.43■■■■□ 3.42
MSH2-203ENST00000454849 SETD1AO15047 1707 aaKnown RBP36.42■■■■□ 3.42
MSH2-203ENST00000454849 IFT172Q9UG01 1749 aa36.42■■■■□ 3.42
MSH2-203ENST00000454849 TMEM132EQ6IEE7 984 aa36.41■■■■□ 3.42
MSH2-203ENST00000454849 NCOA3Q9Y6Q9 1424 aa36.41■■■■□ 3.42
MSH2-203ENST00000454849 ATF3P18847 181 aa36.4■■■■□ 3.42
MSH2-203ENST00000454849 STK26Q9P289 416 aa36.4■■■■□ 3.42
MSH2-203ENST00000454849 KDM2AQ9Y2K7 1162 aa36.4■■■■□ 3.42
MSH2-203ENST00000454849 ROBO2Q9HCK4 1378 aa36.37■■■■□ 3.41
MSH2-203ENST00000454849 FAM135BQ49AJ0 1406 aa36.36■■■■□ 3.41
MSH2-203ENST00000454849 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.36■■■■□ 3.41
MSH2-203ENST00000454849 CADPS2Q86UW7 1296 aa36.34■■■■□ 3.41
MSH2-203ENST00000454849 PIK3C2GO75747 1445 aa36.34■■■■□ 3.41
MSH2-203ENST00000454849 CFAP70Q5T0N1 1121 aa36.33■■■■□ 3.41
MSH2-203ENST00000454849 DCAF11Q8TEB1 546 aa36.33■■■■□ 3.41
MSH2-203ENST00000454849 ROBO1Q9Y6N7 1651 aa36.32■■■■□ 3.4
MSH2-203ENST00000454849 TRIM26Q12899 539 aaPredicted RBP36.3■■■■□ 3.4
MSH2-203ENST00000454849 DISP3Q9P2K9 1392 aa36.29■■■■□ 3.4
MSH2-203ENST00000454849 C14orf93Q9H972 538 aaKnown RBP36.28■■■■□ 3.4
MSH2-203ENST00000454849 PTCH1Q13635 1447 aa36.25■■■■□ 3.39
MSH2-203ENST00000454849 MYOM2P54296 1465 aa36.25■■■■□ 3.39
MSH2-203ENST00000454849 ASXL1Q8IXJ9 1541 aa36.25■■■■□ 3.39
MSH2-203ENST00000454849 WAPLQ7Z5K2 1190 aa36.25■■■■□ 3.39
MSH2-203ENST00000454849 NRXN1Q9ULB1 1477 aa36.24■■■■□ 3.39
MSH2-203ENST00000454849 ADGRL3Q9HAR2 1447 aa36.24■■■■□ 3.39
MSH2-203ENST00000454849 DHX57Q6P158 1386 aaKnown RBP36.23■■■■□ 3.39
MSH2-203ENST00000454849 LRPPRCP42704 1394 aaKnown RBP36.22■■■■□ 3.39
MSH2-203ENST00000454849 NALCNQ8IZF0 1738 aa36.2■■■■□ 3.38
MSH2-203ENST00000454849 YTHDC2Q9H6S0 1430 aaKnown RBP36.17■■■■□ 3.38
MSH2-203ENST00000454849 PLEKHH1Q9ULM0 1364 aa36.17■■■■□ 3.38
MSH2-203ENST00000454849 BRINP3Q76B58 766 aa36.17■■■■□ 3.38
MSH2-203ENST00000454849 SIN3AQ96ST3 1273 aa36.17■■■■□ 3.38
MSH2-203ENST00000454849 DCCP43146 1447 aa36.17■■■■□ 3.38
MSH2-203ENST00000454849 MST1RQ04912 1400 aa36.16■■■■□ 3.38
MSH2-203ENST00000454849 ABCC11Q96J66 1382 aa36.15■■■■□ 3.38
MSH2-203ENST00000454849 PRAG1Q86YV5 1406 aa36.15■■■■□ 3.38
MSH2-203ENST00000454849 NEUROD1Q13562 356 aa36.12■■■■□ 3.37
MSH2-203ENST00000454849 TECPR2O15040 1411 aa36.1■■■■□ 3.37
MSH2-203ENST00000454849 SAFB2Q14151 953 aaKnown RBP eCLIP36.1■■■■□ 3.37
MSH2-203ENST00000454849 DDX17Q92841 729 aaKnown RBP36.1■■■■□ 3.37
MSH2-203ENST00000454849 PHLPP1O60346 1717 aa36.09■■■■□ 3.37
MSH2-203ENST00000454849 NUTM2FA1L443 756 aa36.07■■■■□ 3.36
MSH2-203ENST00000454849 MED1Q15648 1581 aaPredicted RBP36.06■■■■□ 3.36
MSH2-203ENST00000454849 TRAK1Q9UPV9 953 aa36.06■■■■□ 3.36
MSH2-203ENST00000454849 ORAI2Q96SN7 254 aa36.05■■■■□ 3.36
MSH2-203ENST00000454849 LAMC1P11047 1609 aa36.05■■■■□ 3.36
MSH2-203ENST00000454849 PRAM1Q96QH2 718 aa36.04■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms