RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 IQGAP1P46940 1657 aa28.29■■■□□ 2.12
NCL-205ENST00000453992 SPATA31E1Q6ZUB1 1445 aa28.29■■■□□ 2.12
NCL-205ENST00000453992 EID1Q9Y6B2 187 aa28.29■■■□□ 2.12
NCL-205ENST00000453992 NEXMIFQ5QGS0 1516 aa28.28■■■□□ 2.12
NCL-205ENST00000453992 PPLO60437 1756 aa28.26■■■□□ 2.11
NCL-205ENST00000453992 NPHP4O75161 1426 aaPredicted RBP28.26■■■□□ 2.11
NCL-205ENST00000453992 HDGFP51858 240 aaKnown RBP28.25■■■□□ 2.11
NCL-205ENST00000453992 TXNDC2Q86VQ3 553 aa28.25■■■□□ 2.11
NCL-205ENST00000453992 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
NCL-205ENST00000453992 LTKP29376 864 aa28.24■■■□□ 2.11
NCL-205ENST00000453992 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.24■■■□□ 2.11
NCL-205ENST00000453992 ZNF326Q5BKZ1 582 aaKnown RBP28.22■■■□□ 2.11
NCL-205ENST00000453992 RPGRIP1LQ68CZ1 1315 aa28.21■■■□□ 2.11
NCL-205ENST00000453992 PLEKHG1Q9ULL1 1385 aa28.19■■■□□ 2.1
NCL-205ENST00000453992 PPP1R15AO75807 674 aaPredicted RBP28.17■■■□□ 2.1
NCL-205ENST00000453992 DIP2AQ14689 1571 aa28.14■■■□□ 2.1
NCL-205ENST00000453992 SETBP1Q9Y6X0 1596 aa28.14■■■□□ 2.1
NCL-205ENST00000453992 CERKQ8TCT0 537 aa28.13■■■□□ 2.09
NCL-205ENST00000453992 NRXN3Q9Y4C0 1643 aa28.11■■■□□ 2.09
NCL-205ENST00000453992 MYOM2P54296 1465 aa28.1■■■□□ 2.09
NCL-205ENST00000453992 RGL3Q3MIN7 710 aa28.1■■■□□ 2.09
NCL-205ENST00000453992 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
NCL-205ENST00000453992 NUTM2DQ5VT03 806 aaPredicted RBP28.08■■■□□ 2.09
NCL-205ENST00000453992 ZNF335Q9H4Z2 1342 aaPredicted RBP28.06■■■□□ 2.08
NCL-205ENST00000453992 ADAMTS13Q76LX8 1427 aa28.06■■■□□ 2.08
NCL-205ENST00000453992 FBXO41Q8TF61 875 aa28.05■■■□□ 2.08
NCL-205ENST00000453992 LTBP4Q8N2S1 1624 aa28.04■■■□□ 2.08
NCL-205ENST00000453992 NRXN1Q9ULB1 1477 aa28.04■■■□□ 2.08
NCL-205ENST00000453992 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
NCL-205ENST00000453992 SETD1AO15047 1707 aaKnown RBP28.03■■■□□ 2.08
NCL-205ENST00000453992 BCANQ96GW7 911 aa28.02■■■□□ 2.08
NCL-205ENST00000453992 STAC3Q96MF2 364 aa28.02■■■□□ 2.08
NCL-205ENST00000453992 PIK3C2GO75747 1445 aa28.01■■■□□ 2.07
NCL-205ENST00000453992 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
NCL-205ENST00000453992 TBX22Q9Y458 520 aa28■■■□□ 2.07
NCL-205ENST00000453992 LAMC1P11047 1609 aa28■■■□□ 2.07
NCL-205ENST00000453992 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
NCL-205ENST00000453992 SLC26A8Q96RN1 970 aa27.99■■■□□ 2.07
NCL-205ENST00000453992 CHD2O14647 1828 aaKnown RBP27.99■■■□□ 2.07
NCL-205ENST00000453992 ALKQ9UM73 1620 aa27.98■■■□□ 2.07
NCL-205ENST00000453992 STRCP1A6NGW2 1772 aa27.98■■■□□ 2.07
NCL-205ENST00000453992 PIK3R4Q99570 1358 aa27.98■■■□□ 2.07
NCL-205ENST00000453992 ADGRF5Q8IZF2 1346 aa27.97■■■□□ 2.07
NCL-205ENST00000453992 CPS1P31327 1500 aa27.97■■■□□ 2.07
NCL-205ENST00000453992 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
NCL-205ENST00000453992 DCAF11Q8TEB1 546 aa27.94■■■□□ 2.06
NCL-205ENST00000453992 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
NCL-205ENST00000453992 NKTRP30414 1462 aaKnown RBP27.91■■■□□ 2.06
NCL-205ENST00000453992 XRN1Q8IZH2 1706 aaKnown RBP27.9■■■□□ 2.06
NCL-205ENST00000453992 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
NCL-205ENST00000453992 KCNA6P17658 529 aa27.88■■■□□ 2.05
NCL-205ENST00000453992 KIAA1210Q9ULL0 1709 aa27.88■■■□□ 2.05
NCL-205ENST00000453992 METP08581 1390 aa27.87■■■□□ 2.05
NCL-205ENST00000453992 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
NCL-205ENST00000453992 L3MBTL2Q969R5 705 aa27.87■■■□□ 2.05
NCL-205ENST00000453992 KDM2AQ9Y2K7 1162 aa27.86■■■□□ 2.05
NCL-205ENST00000453992 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
NCL-205ENST00000453992 ASXL1Q8IXJ9 1541 aa27.85■■■□□ 2.05
NCL-205ENST00000453992 IQSEC2Q5JU85 1478 aa27.84■■■□□ 2.05
NCL-205ENST00000453992 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
NCL-205ENST00000453992 C14orf93Q9H972 538 aaKnown RBP27.83■■■□□ 2.05
NCL-205ENST00000453992 KNDC1Q76NI1 1749 aa27.82■■■□□ 2.04
NCL-205ENST00000453992 LRRC7Q96NW7 1537 aa27.82■■■□□ 2.04
NCL-205ENST00000453992 XIRP1Q702N8 1843 aaKnown RBP27.8■■■□□ 2.04
NCL-205ENST00000453992 ADGRB1O14514 1584 aa27.79■■■□□ 2.04
NCL-205ENST00000453992 PTCH1Q13635 1447 aa27.77■■■□□ 2.04
NCL-205ENST00000453992 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
NCL-205ENST00000453992 TIMELESSQ9UNS1 1208 aa27.77■■■□□ 2.04
NCL-205ENST00000453992 AMOTL2Q9Y2J4 779 aa27.77■■■□□ 2.04
NCL-205ENST00000453992 TRPM1Q7Z4N2 1603 aa27.76■■■□□ 2.03
NCL-205ENST00000453992 TECPR2O15040 1411 aa27.75■■■□□ 2.03
NCL-205ENST00000453992 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
NCL-205ENST00000453992 YTHDC2Q9H6S0 1430 aaKnown RBP27.74■■■□□ 2.03
NCL-205ENST00000453992 NCOA3Q9Y6Q9 1424 aa27.72■■■□□ 2.03
NCL-205ENST00000453992 TMEM94Q12767 1356 aa27.71■■■□□ 2.03
NCL-205ENST00000453992 ABCC11Q96J66 1382 aa27.71■■■□□ 2.03
NCL-205ENST00000453992 DLC1Q96QB1 1528 aa27.69■■■□□ 2.02
NCL-205ENST00000453992 UBAP1LF5GYI3 381 aa27.69■■■□□ 2.02
NCL-205ENST00000453992 TMEM132EQ6IEE7 984 aa27.69■■■□□ 2.02
NCL-205ENST00000453992 PROSER2Q86WR7 435 aaPredicted RBP27.69■■■□□ 2.02
NCL-205ENST00000453992 ROBO2Q9HCK4 1378 aa27.66■■■□□ 2.02
NCL-205ENST00000453992 FAM135BQ49AJ0 1406 aa27.65■■■□□ 2.02
NCL-205ENST00000453992 RALGAPBQ86X10 1494 aa27.64■■■□□ 2.02
NCL-205ENST00000453992 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.01
NCL-205ENST00000453992 NALCNQ8IZF0 1738 aa27.63■■■□□ 2.01
NCL-205ENST00000453992 NBPF8Q3BBV2 869 aa27.62■■■□□ 2.01
NCL-205ENST00000453992 SIRT1Q96EB6 747 aa27.62■■■□□ 2.01
NCL-205ENST00000453992 STK26Q9P289 416 aa27.61■■■□□ 2.01
NCL-205ENST00000453992 GPRASP1Q5JY77 1395 aa27.6■■■□□ 2.01
NCL-205ENST00000453992 ADGRL3Q9HAR2 1447 aa27.59■■■□□ 2.01
NCL-205ENST00000453992 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.59■■■□□ 2.01
NCL-205ENST00000453992 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
NCL-205ENST00000453992 ROCK2O75116 1388 aaKnown RBP27.59■■■□□ 2.01
NCL-205ENST00000453992 MSH6P52701 1360 aa27.59■■■□□ 2.01
NCL-205ENST00000453992 NBPF1Q3BBV0 1214 aa27.58■■■□□ 2.01
NCL-205ENST00000453992 DCCP43146 1447 aa27.58■■■□□ 2
NCL-205ENST00000453992 TOM1O60784 492 aa27.55■■■□□ 2
NCL-205ENST00000453992 PIP4K2BP78356 416 aa27.54■■■□□ 2
NCL-205ENST00000453992 C14orf37Q86TY3 774 aa27.54■■■□□ 2
NCL-205ENST00000453992 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms