RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CLTCQ00610 1675 aaKnown RBP9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 CTTNBP2Q8WZ74 1663 aa9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 RGL2O15211 777 aa9.4□□□□□ -0.9
SBDSP1-204ENST00000453858 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
SBDSP1-204ENST00000453858 QTRT2Q9H974 415 aaKnown RBP9.4□□□□□ -0.9
SBDSP1-204ENST00000453858 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
SBDSP1-204ENST00000453858 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 AFF2P51816 1311 aa9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 KIDINS220Q9ULH0 1771 aa9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
SBDSP1-204ENST00000453858 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
SBDSP1-204ENST00000453858 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
SBDSP1-204ENST00000453858 SLAIN2Q9P270 581 aa9.38□□□□□ -0.91
SBDSP1-204ENST00000453858 COL16A1Q07092 1604 aaPredicted RBP9.38□□□□□ -0.91
SBDSP1-204ENST00000453858 TNRQ92752 1358 aa9.37□□□□□ -0.91
SBDSP1-204ENST00000453858 HRCP23327 699 aa9.37□□□□□ -0.91
SBDSP1-204ENST00000453858 MS4A3Q96HJ5 214 aa9.37□□□□□ -0.91
SBDSP1-204ENST00000453858 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
SBDSP1-204ENST00000453858 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
SBDSP1-204ENST00000453858 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
SBDSP1-204ENST00000453858 ZC3H13Q5T200 1668 aaKnown RBP9.36□□□□□ -0.91
SBDSP1-204ENST00000453858 GGT6Q6P531 493 aa9.34□□□□□ -0.91
SBDSP1-204ENST00000453858 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
SBDSP1-204ENST00000453858 NHSL1Q5SYE7 1610 aa9.34□□□□□ -0.91
SBDSP1-204ENST00000453858 BCL9LQ86UU0 1499 aa9.34□□□□□ -0.91
SBDSP1-204ENST00000453858 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 PYGBP11216 843 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 C1QTNF8P60827 252 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 SGIP1Q9BQI5 828 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 LRRC9Q6ZRR7 1453 aa9.33□□□□□ -0.92
SBDSP1-204ENST00000453858 MIA2Q96PC5 1412 aa9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 ATMINO43313 823 aaPredicted RBP9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 SLC34A2O95436 690 aa9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 ZNF467Q7Z7K2 595 aaPredicted RBP9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 PELP1Q8IZL8 1130 aaKnown RBP9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
SBDSP1-204ENST00000453858 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 LTKP29376 864 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 NGLY1Q96IV0 654 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 UGGT1Q9NYU2 1555 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
SBDSP1-204ENST00000453858 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 PLXNC1O60486 1568 aa9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 NLRP1Q9C000 1473 aa9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 DEFB132Q7Z7B7 95 aa9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
SBDSP1-204ENST00000453858 C7P10643 843 aa9.29□□□□□ -0.92
SBDSP1-204ENST00000453858 RNF25Q96BH1 459 aaPredicted RBP9.29□□□□□ -0.92
SBDSP1-204ENST00000453858 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
SBDSP1-204ENST00000453858 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 ARHGAP5Q13017 1502 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 KCNA6P17658 529 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 PZPP20742 1482 aa9.28□□□□□ -0.92
SBDSP1-204ENST00000453858 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
SBDSP1-204ENST00000453858 CHGAP10645 457 aaKnown RBP9.27□□□□□ -0.93
SBDSP1-204ENST00000453858 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
SBDSP1-204ENST00000453858 GOLGB1Q14789 3259 aaKnown RBP9.26□□□□□ -0.93
SBDSP1-204ENST00000453858 DIP2AQ14689 1571 aa9.26□□□□□ -0.93
SBDSP1-204ENST00000453858 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
SBDSP1-204ENST00000453858 A2MP01023 1474 aa9.26□□□□□ -0.93
SBDSP1-204ENST00000453858 PCNTO95613 3336 aa9.26□□□□□ -0.93
SBDSP1-204ENST00000453858 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
SBDSP1-204ENST00000453858 MAP3K13O43283 966 aa9.25□□□□□ -0.93
SBDSP1-204ENST00000453858 TIE1P35590 1138 aa9.25□□□□□ -0.93
SBDSP1-204ENST00000453858 C8orf37Q96NL8 207 aa9.25□□□□□ -0.93
SBDSP1-204ENST00000453858 METRNQ9UJH8 293 aa9.25□□□□□ -0.93
SBDSP1-204ENST00000453858 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 KIF14Q15058 1648 aa9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 AHDC1Q5TGY3 1603 aaPredicted RBP9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 SCAF11Q99590 1463 aaKnown RBP9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 CDC42BPBQ9Y5S2 1711 aa9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 SPAG9O60271 1321 aaKnown RBP9.24□□□□□ -0.93
SBDSP1-204ENST00000453858 PRDM15P57071 1507 aaPredicted RBP9.23□□□□□ -0.93
SBDSP1-204ENST00000453858 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
SBDSP1-204ENST00000453858 ATN1P54259 1190 aaPredicted RBP9.22□□□□□ -0.93
SBDSP1-204ENST00000453858 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
SBDSP1-204ENST00000453858 PCDHB13Q9Y5F0 798 aa9.22□□□□□ -0.93
SBDSP1-204ENST00000453858 MSH6P52701 1360 aa9.22□□□□□ -0.93
SBDSP1-204ENST00000453858 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.93
SBDSP1-204ENST00000453858 STK25O00506 426 aa9.21□□□□□ -0.94
SBDSP1-204ENST00000453858 FNBP4Q8N3X1 1017 aaPredicted RBP9.21□□□□□ -0.94
SBDSP1-204ENST00000453858 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
SBDSP1-204ENST00000453858 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
SBDSP1-204ENST00000453858 ABCC3O15438 1527 aa9.21□□□□□ -0.94
SBDSP1-204ENST00000453858 TIAM1Q13009 1591 aa9.2□□□□□ -0.94
SBDSP1-204ENST00000453858 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
SBDSP1-204ENST00000453858 TRPC5Q9UL62 973 aaPredicted RBP9.2□□□□□ -0.94
SBDSP1-204ENST00000453858 ATRNO75882 1429 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms