RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 TXNDC2Q86VQ3 553 aa29.31■■■□□ 2.28
TSSC4-207ENST00000451491 EID1Q9Y6B2 187 aa29.31■■■□□ 2.28
TSSC4-207ENST00000451491 NCKAP5LQ9HCH0 1330 aa29.31■■■□□ 2.28
TSSC4-207ENST00000451491 RGL3Q3MIN7 710 aa29.3■■■□□ 2.28
TSSC4-207ENST00000451491 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
TSSC4-207ENST00000451491 PPLO60437 1756 aa29.29■■■□□ 2.28
TSSC4-207ENST00000451491 HDGFP51858 240 aaKnown RBP29.29■■■□□ 2.28
TSSC4-207ENST00000451491 RPGRIP1LQ68CZ1 1315 aa29.29■■■□□ 2.28
TSSC4-207ENST00000451491 MED14O60244 1454 aa29.28■■■□□ 2.28
TSSC4-207ENST00000451491 IFT172Q9UG01 1749 aa29.28■■■□□ 2.28
TSSC4-207ENST00000451491 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.28■■■□□ 2.28
TSSC4-207ENST00000451491 CLSPNQ9HAW4 1339 aa29.27■■■□□ 2.28
TSSC4-207ENST00000451491 CCER1Q8TC90 406 aaPredicted RBP29.24■■■□□ 2.27
TSSC4-207ENST00000451491 NUTM2DQ5VT03 806 aaPredicted RBP29.23■■■□□ 2.27
TSSC4-207ENST00000451491 NPHP4O75161 1426 aaPredicted RBP29.23■■■□□ 2.27
TSSC4-207ENST00000451491 IQGAP1P46940 1657 aa29.22■■■□□ 2.27
TSSC4-207ENST00000451491 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
TSSC4-207ENST00000451491 PPP1R15AO75807 674 aaPredicted RBP29.21■■■□□ 2.27
TSSC4-207ENST00000451491 PLEKHG1Q9ULL1 1385 aa29.2■■■□□ 2.27
TSSC4-207ENST00000451491 VGFO15240 615 aaPredicted RBP29.2■■■□□ 2.26
TSSC4-207ENST00000451491 DMRT2Q9Y5R5 561 aa29.2■■■□□ 2.26
TSSC4-207ENST00000451491 MYOM2P54296 1465 aa29.16■■■□□ 2.26
TSSC4-207ENST00000451491 SETBP1Q9Y6X0 1596 aa29.13■■■□□ 2.25
TSSC4-207ENST00000451491 NRXN3Q9Y4C0 1643 aa29.13■■■□□ 2.25
TSSC4-207ENST00000451491 DCAF11Q8TEB1 546 aa29.12■■■□□ 2.25
TSSC4-207ENST00000451491 ADGRF5Q8IZF2 1346 aa29.12■■■□□ 2.25
TSSC4-207ENST00000451491 STAC3Q96MF2 364 aa29.11■■■□□ 2.25
TSSC4-207ENST00000451491 NRXN1Q9ULB1 1477 aa29.1■■■□□ 2.25
TSSC4-207ENST00000451491 L3MBTL2Q969R5 705 aa29.1■■■□□ 2.25
TSSC4-207ENST00000451491 ADAMTS13Q76LX8 1427 aa29.09■■■□□ 2.25
TSSC4-207ENST00000451491 BCANQ96GW7 911 aa29.09■■■□□ 2.25
TSSC4-207ENST00000451491 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
TSSC4-207ENST00000451491 KDM2AQ9Y2K7 1162 aa29.08■■■□□ 2.25
TSSC4-207ENST00000451491 PIK3C2GO75747 1445 aa29.08■■■□□ 2.25
TSSC4-207ENST00000451491 DIP2AQ14689 1571 aa29.07■■■□□ 2.24
TSSC4-207ENST00000451491 TONSLQ96HA7 1378 aa29.07■■■□□ 2.24
TSSC4-207ENST00000451491 SLC26A8Q96RN1 970 aa29.06■■■□□ 2.24
TSSC4-207ENST00000451491 TBX22Q9Y458 520 aa29.03■■■□□ 2.24
TSSC4-207ENST00000451491 SETD1AO15047 1707 aaKnown RBP29.03■■■□□ 2.24
TSSC4-207ENST00000451491 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
TSSC4-207ENST00000451491 LAMC1P11047 1609 aa28.99■■■□□ 2.23
TSSC4-207ENST00000451491 TIMELESSQ9UNS1 1208 aa28.98■■■□□ 2.23
TSSC4-207ENST00000451491 PRAG1Q86YV5 1406 aa28.97■■■□□ 2.23
TSSC4-207ENST00000451491 PIK3R4Q99570 1358 aa28.96■■■□□ 2.23
TSSC4-207ENST00000451491 C14orf93Q9H972 538 aaKnown RBP28.95■■■□□ 2.23
TSSC4-207ENST00000451491 CHD2O14647 1828 aaKnown RBP28.95■■■□□ 2.22
TSSC4-207ENST00000451491 METP08581 1390 aa28.95■■■□□ 2.22
TSSC4-207ENST00000451491 ZNF335Q9H4Z2 1342 aaPredicted RBP28.94■■■□□ 2.22
TSSC4-207ENST00000451491 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
TSSC4-207ENST00000451491 CFAP70Q5T0N1 1121 aa28.93■■■□□ 2.22
TSSC4-207ENST00000451491 KIAA1210Q9ULL0 1709 aa28.92■■■□□ 2.22
TSSC4-207ENST00000451491 NWD1Q149M9 1564 aa28.91■■■□□ 2.22
TSSC4-207ENST00000451491 ASXL1Q8IXJ9 1541 aa28.9■■■□□ 2.22
TSSC4-207ENST00000451491 PTPRUQ92729 1446 aa28.89■■■□□ 2.22
TSSC4-207ENST00000451491 KCNA6P17658 529 aa28.89■■■□□ 2.22
TSSC4-207ENST00000451491 LTBP4Q8N2S1 1624 aa28.88■■■□□ 2.21
TSSC4-207ENST00000451491 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
TSSC4-207ENST00000451491 TRPM1Q7Z4N2 1603 aa28.86■■■□□ 2.21
TSSC4-207ENST00000451491 ADGRB1O14514 1584 aa28.86■■■□□ 2.21
TSSC4-207ENST00000451491 NBPF8Q3BBV2 869 aa28.86■■■□□ 2.21
TSSC4-207ENST00000451491 CPS1P31327 1500 aa28.84■■■□□ 2.21
TSSC4-207ENST00000451491 TMEM132EQ6IEE7 984 aa28.84■■■□□ 2.21
TSSC4-207ENST00000451491 AMOTL2Q9Y2J4 779 aa28.83■■■□□ 2.21
TSSC4-207ENST00000451491 NKTRP30414 1462 aaKnown RBP28.83■■■□□ 2.2
TSSC4-207ENST00000451491 LRPPRCP42704 1394 aaKnown RBP28.8■■■□□ 2.2
TSSC4-207ENST00000451491 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
TSSC4-207ENST00000451491 KNDC1Q76NI1 1749 aa28.79■■■□□ 2.2
TSSC4-207ENST00000451491 NBPF1Q3BBV0 1214 aa28.78■■■□□ 2.2
TSSC4-207ENST00000451491 ABCC11Q96J66 1382 aa28.76■■■□□ 2.2
TSSC4-207ENST00000451491 TECPR2O15040 1411 aa28.76■■■□□ 2.2
TSSC4-207ENST00000451491 RALGAPBQ86X10 1494 aa28.76■■■□□ 2.19
TSSC4-207ENST00000451491 LRRC7Q96NW7 1537 aa28.76■■■□□ 2.19
TSSC4-207ENST00000451491 PTCH1Q13635 1447 aa28.75■■■□□ 2.19
TSSC4-207ENST00000451491 STK26Q9P289 416 aa28.74■■■□□ 2.19
TSSC4-207ENST00000451491 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
TSSC4-207ENST00000451491 XIRP1Q702N8 1843 aaKnown RBP28.72■■■□□ 2.19
TSSC4-207ENST00000451491 GPRASP1Q5JY77 1395 aa28.71■■■□□ 2.19
TSSC4-207ENST00000451491 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
TSSC4-207ENST00000451491 ROBO2Q9HCK4 1378 aa28.71■■■□□ 2.19
TSSC4-207ENST00000451491 DLC1Q96QB1 1528 aa28.7■■■□□ 2.19
TSSC4-207ENST00000451491 TMEM94Q12767 1356 aa28.68■■■□□ 2.18
TSSC4-207ENST00000451491 SIRT1Q96EB6 747 aa28.68■■■□□ 2.18
TSSC4-207ENST00000451491 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
TSSC4-207ENST00000451491 FAM135BQ49AJ0 1406 aa28.67■■■□□ 2.18
TSSC4-207ENST00000451491 TRAK1Q9UPV9 953 aa28.67■■■□□ 2.18
TSSC4-207ENST00000451491 NCOA3Q9Y6Q9 1424 aa28.66■■■□□ 2.18
TSSC4-207ENST00000451491 RBM33Q96EV2 1170 aaKnown RBP28.65■■■□□ 2.18
TSSC4-207ENST00000451491 CERKQ8TCT0 537 aa28.64■■■□□ 2.18
TSSC4-207ENST00000451491 IQSEC2Q5JU85 1478 aa28.63■■■□□ 2.17
TSSC4-207ENST00000451491 CARD11Q9BXL7 1154 aa28.61■■■□□ 2.17
TSSC4-207ENST00000451491 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
TSSC4-207ENST00000451491 WAPLQ7Z5K2 1190 aa28.6■■■□□ 2.17
TSSC4-207ENST00000451491 PRAM1Q96QH2 718 aa28.6■■■□□ 2.17
TSSC4-207ENST00000451491 NALCNQ8IZF0 1738 aa28.59■■■□□ 2.17
TSSC4-207ENST00000451491 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.57■■■□□ 2.16
TSSC4-207ENST00000451491 ADGRL3Q9HAR2 1447 aa28.56■■■□□ 2.16
TSSC4-207ENST00000451491 POGKQ9P215 609 aa28.56■■■□□ 2.16
TSSC4-207ENST00000451491 C14orf37Q86TY3 774 aa28.54■■■□□ 2.16
TSSC4-207ENST00000451491 C19orf44Q9H6X5 657 aa28.53■■■□□ 2.16
TSSC4-207ENST00000451491 MSH6P52701 1360 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms