RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 EIF2AK4Q9P2K8 1649 aaKnown RBP19.83■□□□□ 0.77
SF1-211ENST00000448404 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.77
SF1-211ENST00000448404 TET3O43151 1660 aa19.83■□□□□ 0.77
SF1-211ENST00000448404 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
SF1-211ENST00000448404 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.76
SF1-211ENST00000448404 PPP2R1AP30153 589 aa19.82■□□□□ 0.76
SF1-211ENST00000448404 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
SF1-211ENST00000448404 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
SF1-211ENST00000448404 NPATQ14207 1427 aa19.81■□□□□ 0.76
SF1-211ENST00000448404 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
SF1-211ENST00000448404 CEP152O94986 1710 aa19.81■□□□□ 0.76
SF1-211ENST00000448404 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
SF1-211ENST00000448404 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
SF1-211ENST00000448404 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
SF1-211ENST00000448404 EXOC6Q8TAG9 804 aa19.78■□□□□ 0.76
SF1-211ENST00000448404 CCDC136Q96JN2 1154 aa19.78■□□□□ 0.76
SF1-211ENST00000448404 FRMPD1Q5SYB0 1578 aa19.78■□□□□ 0.76
SF1-211ENST00000448404 MROH2AA6NES4 1674 aa19.77■□□□□ 0.76
SF1-211ENST00000448404 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
SF1-211ENST00000448404 SKAP1Q86WV1 359 aa19.76■□□□□ 0.75
SF1-211ENST00000448404 RCAN3Q9UKA8 241 aa19.76■□□□□ 0.75
SF1-211ENST00000448404 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
SF1-211ENST00000448404 YEATS2Q9ULM3 1422 aa19.75■□□□□ 0.75
SF1-211ENST00000448404 MSH5O43196 834 aa19.75■□□□□ 0.75
SF1-211ENST00000448404 STK26Q9P289 416 aa19.75■□□□□ 0.75
SF1-211ENST00000448404 LAMC1P11047 1609 aa19.75■□□□□ 0.75
SF1-211ENST00000448404 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
SF1-211ENST00000448404 ABCA6Q8N139 1617 aa19.74■□□□□ 0.75
SF1-211ENST00000448404 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
SF1-211ENST00000448404 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
SF1-211ENST00000448404 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
SF1-211ENST00000448404 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.75
SF1-211ENST00000448404 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
SF1-211ENST00000448404 IDI1Q13907 227 aa19.71■□□□□ 0.75
SF1-211ENST00000448404 MLECQ14165 292 aa19.71■□□□□ 0.75
SF1-211ENST00000448404 ERVK-7P63135 1459 aa19.71■□□□□ 0.75
SF1-211ENST00000448404 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
SF1-211ENST00000448404 MAP3K4Q9Y6R4 1608 aa19.69■□□□□ 0.74
SF1-211ENST00000448404 C20orf194Q5TEA3 1177 aa19.69■□□□□ 0.74
SF1-211ENST00000448404 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
SF1-211ENST00000448404 EIF3AQ14152 1382 aaKnown RBP19.68■□□□□ 0.74
SF1-211ENST00000448404 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
SF1-211ENST00000448404 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
SF1-211ENST00000448404 SPINK5Q9NQ38 1064 aaPredicted RBP19.67■□□□□ 0.74
SF1-211ENST00000448404 MLH3Q9UHC1 1453 aa19.66■□□□□ 0.74
SF1-211ENST00000448404 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
SF1-211ENST00000448404 KIF1BO60333 1816 aa19.66■□□□□ 0.74
SF1-211ENST00000448404 HECW2Q9P2P5 1572 aa19.66■□□□□ 0.74
SF1-211ENST00000448404 APAF1O14727 1248 aa19.66■□□□□ 0.74
SF1-211ENST00000448404 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
SF1-211ENST00000448404 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
SF1-211ENST00000448404 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
SF1-211ENST00000448404 ABCC3O15438 1527 aa19.64■□□□□ 0.73
SF1-211ENST00000448404 MYOM1P52179 1685 aa19.64■□□□□ 0.73
SF1-211ENST00000448404 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
SF1-211ENST00000448404 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
SF1-211ENST00000448404 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
SF1-211ENST00000448404 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
SF1-211ENST00000448404 MYOM2P54296 1465 aa19.62■□□□□ 0.73
SF1-211ENST00000448404 STAC3Q96MF2 364 aa19.61■□□□□ 0.73
SF1-211ENST00000448404 ADGRB3O60242 1522 aa19.61■□□□□ 0.73
SF1-211ENST00000448404 CRBNQ96SW2 442 aa19.61■□□□□ 0.73
SF1-211ENST00000448404 PIK3C2GO75747 1445 aa19.6■□□□□ 0.73
SF1-211ENST00000448404 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
SF1-211ENST00000448404 SYNMO15061 1565 aa19.59■□□□□ 0.73
SF1-211ENST00000448404 LMTK2Q8IWU2 1503 aa19.58■□□□□ 0.72
SF1-211ENST00000448404 DIP2CQ9Y2E4 1556 aa19.58■□□□□ 0.72
SF1-211ENST00000448404 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
SF1-211ENST00000448404 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
SF1-211ENST00000448404 DUSP27Q5VZP5 1158 aa19.56■□□□□ 0.72
SF1-211ENST00000448404 NRXN1Q9ULB1 1477 aa19.56■□□□□ 0.72
SF1-211ENST00000448404 PDE3BQ13370 1112 aa19.56■□□□□ 0.72
SF1-211ENST00000448404 KDM5AP29375 1690 aaKnown RBP19.56■□□□□ 0.72
SF1-211ENST00000448404 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
SF1-211ENST00000448404 IFT172Q9UG01 1749 aa19.55■□□□□ 0.72
SF1-211ENST00000448404 NEO1Q92859 1461 aa19.53■□□□□ 0.72
SF1-211ENST00000448404 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
SF1-211ENST00000448404 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
SF1-211ENST00000448404 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
SF1-211ENST00000448404 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
SF1-211ENST00000448404 FBLN1P23142 703 aa19.52■□□□□ 0.72
SF1-211ENST00000448404 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
SF1-211ENST00000448404 CAMSAP1Q5T5Y3 1602 aa19.52■□□□□ 0.72
SF1-211ENST00000448404 BCAR3O75815 825 aa19.51■□□□□ 0.71
SF1-211ENST00000448404 MTHFSP49914 203 aa19.51■□□□□ 0.71
SF1-211ENST00000448404 ZMYM4Q5VZL5 1548 aa19.51■□□□□ 0.71
SF1-211ENST00000448404 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
SF1-211ENST00000448404 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
SF1-211ENST00000448404 PPLO60437 1756 aa19.5■□□□□ 0.71
SF1-211ENST00000448404 CFAP74Q9C0B2 1584 aa19.5■□□□□ 0.71
SF1-211ENST00000448404 KIAA1210Q9ULL0 1709 aa19.5■□□□□ 0.71
SF1-211ENST00000448404 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
SF1-211ENST00000448404 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
SF1-211ENST00000448404 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
SF1-211ENST00000448404 RICTORQ6R327 1708 aa19.48■□□□□ 0.71
SF1-211ENST00000448404 WAPLQ7Z5K2 1190 aa19.47■□□□□ 0.71
SF1-211ENST00000448404 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
SF1-211ENST00000448404 POGKQ9P215 609 aa19.46■□□□□ 0.71
SF1-211ENST00000448404 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
SF1-211ENST00000448404 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms