RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
SNHG4-201ENST00000448190 MED14O60244 1454 aa19.62■□□□□ 0.73
SNHG4-201ENST00000448190 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
SNHG4-201ENST00000448190 TRPM2O94759 1503 aa19.61■□□□□ 0.73
SNHG4-201ENST00000448190 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
SNHG4-201ENST00000448190 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
SNHG4-201ENST00000448190 CLTCL1P53675 1640 aa19.59■□□□□ 0.73
SNHG4-201ENST00000448190 ANKRD30BQ9BXX2 1392 aa19.58■□□□□ 0.73
SNHG4-201ENST00000448190 SPHKAPQ2M3C7 1700 aa19.58■□□□□ 0.72
SNHG4-201ENST00000448190 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
SNHG4-201ENST00000448190 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
SNHG4-201ENST00000448190 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
SNHG4-201ENST00000448190 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
SNHG4-201ENST00000448190 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
SNHG4-201ENST00000448190 KCNA6P17658 529 aa19.52■□□□□ 0.72
SNHG4-201ENST00000448190 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
SNHG4-201ENST00000448190 ADGRF5Q8IZF2 1346 aa19.51■□□□□ 0.71
SNHG4-201ENST00000448190 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
SNHG4-201ENST00000448190 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
SNHG4-201ENST00000448190 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
SNHG4-201ENST00000448190 POLR1AO95602 1720 aaPredicted RBP19.51■□□□□ 0.71
SNHG4-201ENST00000448190 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
SNHG4-201ENST00000448190 IQGAP1P46940 1657 aa19.5■□□□□ 0.71
SNHG4-201ENST00000448190 NEUROD1Q13562 356 aa19.5■□□□□ 0.71
SNHG4-201ENST00000448190 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
SNHG4-201ENST00000448190 ILDR1Q86SU0 546 aaPredicted RBP19.49■□□□□ 0.71
SNHG4-201ENST00000448190 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
SNHG4-201ENST00000448190 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
SNHG4-201ENST00000448190 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
SNHG4-201ENST00000448190 AMOTL2Q9Y2J4 779 aa19.46■□□□□ 0.71
SNHG4-201ENST00000448190 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
SNHG4-201ENST00000448190 FBXO41Q8TF61 875 aa19.45■□□□□ 0.7
SNHG4-201ENST00000448190 NEXMIFQ5QGS0 1516 aa19.45■□□□□ 0.7
SNHG4-201ENST00000448190 METP08581 1390 aa19.44■□□□□ 0.7
SNHG4-201ENST00000448190 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
SNHG4-201ENST00000448190 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
SNHG4-201ENST00000448190 KIF1BO60333 1816 aa19.41■□□□□ 0.7
SNHG4-201ENST00000448190 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
SNHG4-201ENST00000448190 STK26Q9P289 416 aa19.4■□□□□ 0.7
SNHG4-201ENST00000448190 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
SNHG4-201ENST00000448190 PIP4K2BP78356 416 aa19.39■□□□□ 0.69
SNHG4-201ENST00000448190 TMEM94Q12767 1356 aa19.39■□□□□ 0.69
SNHG4-201ENST00000448190 LRRC7Q96NW7 1537 aa19.39■□□□□ 0.69
SNHG4-201ENST00000448190 CPS1P31327 1500 aa19.38■□□□□ 0.69
SNHG4-201ENST00000448190 C14orf37Q86TY3 774 aa19.38■□□□□ 0.69
SNHG4-201ENST00000448190 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
SNHG4-201ENST00000448190 C14orf93Q9H972 538 aaKnown RBP19.36■□□□□ 0.69
SNHG4-201ENST00000448190 PIK3R4Q99570 1358 aa19.35■□□□□ 0.69
SNHG4-201ENST00000448190 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
SNHG4-201ENST00000448190 STRCP1A6NGW2 1772 aa19.34■□□□□ 0.69
SNHG4-201ENST00000448190 TOM1O60784 492 aa19.34■□□□□ 0.69
SNHG4-201ENST00000448190 SETBP1Q9Y6X0 1596 aa19.34■□□□□ 0.69
SNHG4-201ENST00000448190 ALKQ9UM73 1620 aa19.32■□□□□ 0.68
SNHG4-201ENST00000448190 NRXN3Q9Y4C0 1643 aa19.31■□□□□ 0.68
SNHG4-201ENST00000448190 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
SNHG4-201ENST00000448190 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
SNHG4-201ENST00000448190 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
SNHG4-201ENST00000448190 STAC3Q96MF2 364 aa19.28■□□□□ 0.68
SNHG4-201ENST00000448190 PPLO60437 1756 aa19.28■□□□□ 0.68
SNHG4-201ENST00000448190 ROBO2Q9HCK4 1378 aa19.28■□□□□ 0.68
SNHG4-201ENST00000448190 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
SNHG4-201ENST00000448190 C19orf44Q9H6X5 657 aa19.27■□□□□ 0.68
SNHG4-201ENST00000448190 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
SNHG4-201ENST00000448190 MYOM2P54296 1465 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 NRXN1Q9ULB1 1477 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 MSH6P52701 1360 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 ATF3P18847 181 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
SNHG4-201ENST00000448190 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
SNHG4-201ENST00000448190 NWD1Q149M9 1564 aa19.24■□□□□ 0.67
SNHG4-201ENST00000448190 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
SNHG4-201ENST00000448190 SLAIN2Q9P270 581 aa19.24■□□□□ 0.67
SNHG4-201ENST00000448190 LRPPRCP42704 1394 aaKnown RBP19.23■□□□□ 0.67
SNHG4-201ENST00000448190 CHD2O14647 1828 aaKnown RBP19.22■□□□□ 0.67
SNHG4-201ENST00000448190 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
SNHG4-201ENST00000448190 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
SNHG4-201ENST00000448190 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
SNHG4-201ENST00000448190 HSPA1LP34931 641 aa19.2■□□□□ 0.66
SNHG4-201ENST00000448190 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
SNHG4-201ENST00000448190 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
SNHG4-201ENST00000448190 POGKQ9P215 609 aa19.2■□□□□ 0.66
SNHG4-201ENST00000448190 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
SNHG4-201ENST00000448190 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
SNHG4-201ENST00000448190 IFT172Q9UG01 1749 aa19.19■□□□□ 0.66
SNHG4-201ENST00000448190 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
SNHG4-201ENST00000448190 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
SNHG4-201ENST00000448190 PRAG1Q86YV5 1406 aa19.17■□□□□ 0.66
SNHG4-201ENST00000448190 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
SNHG4-201ENST00000448190 SIRT1Q96EB6 747 aa19.16■□□□□ 0.66
SNHG4-201ENST00000448190 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
SNHG4-201ENST00000448190 PTCH1Q13635 1447 aa19.15■□□□□ 0.66
SNHG4-201ENST00000448190 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.65
SNHG4-201ENST00000448190 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
SNHG4-201ENST00000448190 XIRP1Q702N8 1843 aaKnown RBP19.13■□□□□ 0.65
SNHG4-201ENST00000448190 ADGRL3Q9HAR2 1447 aa19.12■□□□□ 0.65
SNHG4-201ENST00000448190 TECPR2O15040 1411 aa19.11■□□□□ 0.65
SNHG4-201ENST00000448190 MINK1Q8N4C8 1332 aaPredicted RBP19.11■□□□□ 0.65
SNHG4-201ENST00000448190 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
SNHG4-201ENST00000448190 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms