RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 NLRP13Q86W25 1043 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 FOXD4L1Q9NU39 408 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 FHAD1B1AJZ9 1412 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 RUSC2Q8N2Y8 1516 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 GOLGA2Q08379 1002 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 CAVIN1Q6NZI2 390 aaKnown RBP6.31□□□□□ -1.4
SCN11A-202ENST00000444237 PRIMPOLQ96LW4 560 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 PHF23Q9BUL5 403 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-202ENST00000444237 RRAGDQ9NQL2 400 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-202ENST00000444237 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 PTPRGP23470 1445 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 FHOD3Q2V2M9 1422 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 CFAP53Q96M91 514 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 CIZ1Q9ULV3 898 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-202ENST00000444237 MBD3O95983 291 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 GTF2A1P52655 376 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-202ENST00000444237 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 ERICH4A6NGS2 130 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 OFD1O75665 1012 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 FOXD1Q16676 465 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 IFT57Q9NWB7 429 aa6.3□□□□□ -1.4
SCN11A-202ENST00000444237 MYBBP1AQ9BQG0 1328 aaKnown RBP6.29□□□□□ -1.4
SCN11A-202ENST00000444237 C22orf23Q9BZE7 217 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 TOP2BQ02880 1626 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 KIF15Q9NS87 1388 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 RNF20Q5VTR2 975 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
SCN11A-202ENST00000444237 XRCC6P12956 609 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 UTP14CQ5TAP6 766 aaKnown RBP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 NOC3LQ8WTT2 800 aaKnown RBP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 KDM2AQ9Y2K7 1162 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 CCDC112Q8NEF3 446 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 MNS1Q8NEH6 495 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 PLIN1O60240 522 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
SCN11A-202ENST00000444237 TSPY26PQ9H489 355 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 AKNAQ7Z591 1439 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 RRP7BPQ9NSQ0 103 aa6.28□□□□□ -1.4
SCN11A-202ENST00000444237 PRG4Q92954 1404 aaPredicted RBP6.27□□□□□ -1.4
SCN11A-202ENST00000444237 H0YHG0 523 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
SCN11A-202ENST00000444237 GIMAP7Q8NHV1 300 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 GOLGA6L19H0YKK7 550 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 HS1BP3Q53T59 392 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 GPATCH11Q8N954 259 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 IGF1RP08069 1367 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 SSR1P43307 286 aaKnown RBP6.27□□□□□ -1.41
SCN11A-202ENST00000444237 FAM69CQ0P6D2 419 aa6.27□□□□□ -1.41
SCN11A-202ENST00000444237 XPCQ01831 940 aaPredicted RBP6.27□□□□□ -1.41
SCN11A-202ENST00000444237 FMN1Q68DA7 1419 aa6.26□□□□□ -1.41
SCN11A-202ENST00000444237 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
SCN11A-202ENST00000444237 ZNF608Q9ULD9 1512 aaPredicted RBP6.26□□□□□ -1.41
SCN11A-202ENST00000444237 TPD52L1Q16890 204 aaPredicted RBP6.26□□□□□ -1.41
SCN11A-202ENST00000444237 VGLL3A8MV65 326 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 HMGB1P09429 215 aaKnown RBP6.25□□□□□ -1.41
SCN11A-202ENST00000444237 FAM184AQ8NB25 1140 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 ERCC4Q92889 916 aaPredicted RBP6.25□□□□□ -1.41
SCN11A-202ENST00000444237 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 FEZ1Q99689 392 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 DMTNQ08495 405 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 WWC1Q8IX03 1113 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 FAM107BQ9H098 131 aa6.25□□□□□ -1.41
SCN11A-202ENST00000444237 NEUROD2Q15784 382 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 HOMER1Q86YM7 354 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 RBM28Q9NW13 759 aaKnown RBP6.24□□□□□ -1.41
SCN11A-202ENST00000444237 KRT222Q8N1A0 295 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCN11A-202ENST00000444237 TRIM6-TRIM34B2RNG4 842 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 TRIM34Q9BYJ4 488 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 BECN2A8MW95 431 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 HSP90AB3PQ58FF7 597 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 ITPRIPQ8IWB1 547 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 CCAR2Q8N163 923 aaKnown RBP6.24□□□□□ -1.41
SCN11A-202ENST00000444237 TXLNBQ8N3L3 684 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 SYNJ2O15056 1496 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 TDO2P48775 406 aa6.24□□□□□ -1.41
SCN11A-202ENST00000444237 GABPB1Q06547 395 aaPredicted RBP6.24□□□□□ -1.41
SCN11A-202ENST00000444237 CCP110O43303 1012 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 FAM193AP78312 1265 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 TMF1P82094 1093 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 CCDC70Q6NSX1 233 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 DCAF8L1A6NGE4 600 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 CREBRFQ8IUR6 639 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 SPDYE4A6NLX3 237 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 DHX8Q14562 1220 aaKnown RBP6.23□□□□□ -1.41
SCN11A-202ENST00000444237 NOL10Q9BSC4 688 aaKnown RBP6.23□□□□□ -1.41
SCN11A-202ENST00000444237 CCDC7Q96M83 1385 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 ABCA10Q8WWZ4 1543 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 CCDC191Q8NCU4 936 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 OGFRQ9NZT2 677 aa6.23□□□□□ -1.41
SCN11A-202ENST00000444237 EIF3JO75822 258 aaKnown RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 CDR1P51861 262 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 NGEFQ8N5V2 710 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 CCDC91Q7Z6B0 441 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 PANK2Q9BZ23 570 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms