RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.33
SATB2-204ENST00000440919 DEPDC5O75140 1603 aa23.33■■□□□ 1.33
SATB2-204ENST00000440919 PTPRTO14522 1441 aa23.32■■□□□ 1.32
SATB2-204ENST00000440919 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
SATB2-204ENST00000440919 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
SATB2-204ENST00000440919 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
SATB2-204ENST00000440919 PLIN1O60240 522 aa23.31■■□□□ 1.32
SATB2-204ENST00000440919 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
SATB2-204ENST00000440919 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
SATB2-204ENST00000440919 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
SATB2-204ENST00000440919 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
SATB2-204ENST00000440919 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
SATB2-204ENST00000440919 MS4A1P11836 297 aa23.29■■□□□ 1.32
SATB2-204ENST00000440919 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
SATB2-204ENST00000440919 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
SATB2-204ENST00000440919 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
SATB2-204ENST00000440919 STAC3Q96MF2 364 aa23.28■■□□□ 1.32
SATB2-204ENST00000440919 MYOM1P52179 1685 aa23.28■■□□□ 1.32
SATB2-204ENST00000440919 TET3O43151 1660 aa23.28■■□□□ 1.32
SATB2-204ENST00000440919 NBR1Q14596 966 aa23.28■■□□□ 1.32
SATB2-204ENST00000440919 PDE4AP27815 886 aa23.27■■□□□ 1.32
SATB2-204ENST00000440919 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
SATB2-204ENST00000440919 DEKP35659 375 aaKnown RBP23.26■■□□□ 1.31
SATB2-204ENST00000440919 CRBNQ96SW2 442 aa23.26■■□□□ 1.31
SATB2-204ENST00000440919 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
SATB2-204ENST00000440919 CDCA8Q53HL2 280 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 KANK1Q14678 1352 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 NEO1Q92859 1461 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
SATB2-204ENST00000440919 PLEKHH1Q9ULM0 1364 aa23.24■■□□□ 1.31
SATB2-204ENST00000440919 KIF3BO15066 747 aa23.24■■□□□ 1.31
SATB2-204ENST00000440919 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
SATB2-204ENST00000440919 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
SATB2-204ENST00000440919 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
SATB2-204ENST00000440919 ZNF521Q96K83 1311 aa23.22■■□□□ 1.31
SATB2-204ENST00000440919 NEURL4Q96JN8 1562 aa23.21■■□□□ 1.31
SATB2-204ENST00000440919 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
SATB2-204ENST00000440919 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
SATB2-204ENST00000440919 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
SATB2-204ENST00000440919 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
SATB2-204ENST00000440919 EIF3AQ14152 1382 aaKnown RBP23.19■■□□□ 1.3
SATB2-204ENST00000440919 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
SATB2-204ENST00000440919 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
SATB2-204ENST00000440919 C20orf194Q5TEA3 1177 aa23.18■■□□□ 1.3
SATB2-204ENST00000440919 GLI2P10070 1586 aa23.18■■□□□ 1.3
SATB2-204ENST00000440919 HECW2Q9P2P5 1572 aa23.18■■□□□ 1.3
SATB2-204ENST00000440919 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
SATB2-204ENST00000440919 GOLGA2Q08379 1002 aa23.14■■□□□ 1.3
SATB2-204ENST00000440919 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.29
SATB2-204ENST00000440919 ABCA6Q8N139 1617 aa23.14■■□□□ 1.29
SATB2-204ENST00000440919 MYOM2P54296 1465 aa23.13■■□□□ 1.29
SATB2-204ENST00000440919 SKAP1Q86WV1 359 aa23.12■■□□□ 1.29
SATB2-204ENST00000440919 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
SATB2-204ENST00000440919 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
SATB2-204ENST00000440919 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
SATB2-204ENST00000440919 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
SATB2-204ENST00000440919 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
SATB2-204ENST00000440919 SLFN5Q08AF3 891 aa23.09■■□□□ 1.29
SATB2-204ENST00000440919 KIF1BO60333 1816 aa23.09■■□□□ 1.29
SATB2-204ENST00000440919 TRMT2AQ8IZ69 625 aaKnown RBP23.08■■□□□ 1.29
SATB2-204ENST00000440919 FRMPD1Q5SYB0 1578 aa23.07■■□□□ 1.28
SATB2-204ENST00000440919 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
SATB2-204ENST00000440919 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
SATB2-204ENST00000440919 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
SATB2-204ENST00000440919 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
SATB2-204ENST00000440919 SLC24A1O60721 1099 aa23.06■■□□□ 1.28
SATB2-204ENST00000440919 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
SATB2-204ENST00000440919 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
SATB2-204ENST00000440919 RICTORQ6R327 1708 aa23.06■■□□□ 1.28
SATB2-204ENST00000440919 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
SATB2-204ENST00000440919 MYO3AQ8NEV4 1616 aa23.05■■□□□ 1.28
SATB2-204ENST00000440919 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
SATB2-204ENST00000440919 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
SATB2-204ENST00000440919 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
SATB2-204ENST00000440919 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
SATB2-204ENST00000440919 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
SATB2-204ENST00000440919 PPRC1Q5VV67 1664 aaKnown RBP23.02■■□□□ 1.28
SATB2-204ENST00000440919 APAF1O14727 1248 aa23.01■■□□□ 1.27
SATB2-204ENST00000440919 CARD14Q9BXL6 1004 aa23.01■■□□□ 1.27
SATB2-204ENST00000440919 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
SATB2-204ENST00000440919 GGT6Q6P531 493 aa23■■□□□ 1.27
SATB2-204ENST00000440919 DIP2CQ9Y2E4 1556 aa23■■□□□ 1.27
SATB2-204ENST00000440919 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
SATB2-204ENST00000440919 DDRGK1Q96HY6 314 aa22.99■■□□□ 1.27
SATB2-204ENST00000440919 LAS1LQ9Y4W2 734 aaKnown RBP22.97■■□□□ 1.27
SATB2-204ENST00000440919 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
SATB2-204ENST00000440919 E9PSI1 815 aa22.96■■□□□ 1.27
SATB2-204ENST00000440919 ADGRB3O60242 1522 aa22.96■■□□□ 1.27
SATB2-204ENST00000440919 NGEFQ8N5V2 710 aa22.96■■□□□ 1.27
SATB2-204ENST00000440919 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
SATB2-204ENST00000440919 POLR3AO14802 1390 aaPredicted RBP22.94■■□□□ 1.26
SATB2-204ENST00000440919 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
SATB2-204ENST00000440919 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
SATB2-204ENST00000440919 NEFMP07197 916 aa22.93■■□□□ 1.26
SATB2-204ENST00000440919 FAM161AQ3B820 660 aa22.93■■□□□ 1.26
SATB2-204ENST00000440919 C8orf34Q49A92 452 aa22.93■■□□□ 1.26
SATB2-204ENST00000440919 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
SATB2-204ENST00000440919 BCAR3O75815 825 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms