RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 ZFYVE9O95405 1425 aa27.4■■□□□ 1.98
DDR1-236ENST00000431373 RIMS2Q9UQ26 1411 aa27.4■■□□□ 1.98
DDR1-236ENST00000431373 HDGFP51858 240 aaKnown RBP27.35■■□□□ 1.97
DDR1-236ENST00000431373 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
DDR1-236ENST00000431373 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
DDR1-236ENST00000431373 ANKRD30BQ9BXX2 1392 aa27.32■■□□□ 1.96
DDR1-236ENST00000431373 PPP1R15AO75807 674 aaPredicted RBP27.31■■□□□ 1.96
DDR1-236ENST00000431373 NEXMIFQ5QGS0 1516 aa27.31■■□□□ 1.96
DDR1-236ENST00000431373 PLEKHG1Q9ULL1 1385 aa27.28■■□□□ 1.96
DDR1-236ENST00000431373 PPLO60437 1756 aa27.27■■□□□ 1.96
DDR1-236ENST00000431373 SPATA31E1Q6ZUB1 1445 aa27.26■■□□□ 1.95
DDR1-236ENST00000431373 NUTM2DQ5VT03 806 aaPredicted RBP27.26■■□□□ 1.95
DDR1-236ENST00000431373 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
DDR1-236ENST00000431373 RPGRIP1LQ68CZ1 1315 aa27.23■■□□□ 1.95
DDR1-236ENST00000431373 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
DDR1-236ENST00000431373 BCANQ96GW7 911 aa27.23■■□□□ 1.95
DDR1-236ENST00000431373 IFT172Q9UG01 1749 aa27.23■■□□□ 1.95
DDR1-236ENST00000431373 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
DDR1-236ENST00000431373 RGL3Q3MIN7 710 aa27.2■■□□□ 1.94
DDR1-236ENST00000431373 SLC26A8Q96RN1 970 aa27.19■■□□□ 1.94
DDR1-236ENST00000431373 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
DDR1-236ENST00000431373 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
DDR1-236ENST00000431373 SETBP1Q9Y6X0 1596 aa27.18■■□□□ 1.94
DDR1-236ENST00000431373 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
DDR1-236ENST00000431373 STRCP1A6NGW2 1772 aa27.17■■□□□ 1.94
DDR1-236ENST00000431373 NRXN3Q9Y4C0 1643 aa27.17■■□□□ 1.94
DDR1-236ENST00000431373 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
DDR1-236ENST00000431373 ADAMTS13Q76LX8 1427 aa27.16■■□□□ 1.94
DDR1-236ENST00000431373 CPS1P31327 1500 aa27.14■■□□□ 1.94
DDR1-236ENST00000431373 CHD2O14647 1828 aaKnown RBP27.12■■□□□ 1.93
DDR1-236ENST00000431373 TBX22Q9Y458 520 aa27.12■■□□□ 1.93
DDR1-236ENST00000431373 CERKQ8TCT0 537 aa27.11■■□□□ 1.93
DDR1-236ENST00000431373 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
DDR1-236ENST00000431373 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
DDR1-236ENST00000431373 PIK3R4Q99570 1358 aa27.06■■□□□ 1.92
DDR1-236ENST00000431373 MYOM2P54296 1465 aa27.06■■□□□ 1.92
DDR1-236ENST00000431373 KCNA6P17658 529 aa27.05■■□□□ 1.92
DDR1-236ENST00000431373 ADGRF5Q8IZF2 1346 aa27.05■■□□□ 1.92
DDR1-236ENST00000431373 IQSEC2Q5JU85 1478 aa27.05■■□□□ 1.92
DDR1-236ENST00000431373 ALKQ9UM73 1620 aa27.05■■□□□ 1.92
DDR1-236ENST00000431373 LRRC7Q96NW7 1537 aa27.01■■□□□ 1.91
DDR1-236ENST00000431373 NKTRP30414 1462 aaKnown RBP27.01■■□□□ 1.91
DDR1-236ENST00000431373 NRXN1Q9ULB1 1477 aa27■■□□□ 1.91
DDR1-236ENST00000431373 PIK3C2GO75747 1445 aa27■■□□□ 1.91
DDR1-236ENST00000431373 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
DDR1-236ENST00000431373 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
DDR1-236ENST00000431373 METP08581 1390 aa26.98■■□□□ 1.91
DDR1-236ENST00000431373 DCAF11Q8TEB1 546 aa26.98■■□□□ 1.91
DDR1-236ENST00000431373 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
DDR1-236ENST00000431373 PTPRUQ92729 1446 aa26.98■■□□□ 1.91
DDR1-236ENST00000431373 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
DDR1-236ENST00000431373 LAMC1P11047 1609 aa26.97■■□□□ 1.91
DDR1-236ENST00000431373 KDM2AQ9Y2K7 1162 aa26.95■■□□□ 1.9
DDR1-236ENST00000431373 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
DDR1-236ENST00000431373 PROSER2Q86WR7 435 aaPredicted RBP26.93■■□□□ 1.9
DDR1-236ENST00000431373 AMOTL2Q9Y2J4 779 aa26.93■■□□□ 1.9
DDR1-236ENST00000431373 TMEM94Q12767 1356 aa26.9■■□□□ 1.9
DDR1-236ENST00000431373 ASXL1Q8IXJ9 1541 aa26.89■■□□□ 1.89
DDR1-236ENST00000431373 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
DDR1-236ENST00000431373 FBXO41Q8TF61 875 aa26.87■■□□□ 1.89
DDR1-236ENST00000431373 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
DDR1-236ENST00000431373 L3MBTL2Q969R5 705 aa26.85■■□□□ 1.89
DDR1-236ENST00000431373 KNDC1Q76NI1 1749 aa26.85■■□□□ 1.89
DDR1-236ENST00000431373 PRAG1Q86YV5 1406 aa26.84■■□□□ 1.89
DDR1-236ENST00000431373 RBM33Q96EV2 1170 aaKnown RBP26.84■■□□□ 1.89
DDR1-236ENST00000431373 NCOA3Q9Y6Q9 1424 aa26.83■■□□□ 1.89
DDR1-236ENST00000431373 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
DDR1-236ENST00000431373 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
DDR1-236ENST00000431373 TMEM132EQ6IEE7 984 aa26.82■■□□□ 1.88
DDR1-236ENST00000431373 LRPPRCP42704 1394 aaKnown RBP26.81■■□□□ 1.88
DDR1-236ENST00000431373 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
DDR1-236ENST00000431373 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
DDR1-236ENST00000431373 YTHDC2Q9H6S0 1430 aaKnown RBP26.8■■□□□ 1.88
DDR1-236ENST00000431373 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
DDR1-236ENST00000431373 ADGRB1O14514 1584 aa26.79■■□□□ 1.88
DDR1-236ENST00000431373 MSH6P52701 1360 aa26.78■■□□□ 1.88
DDR1-236ENST00000431373 TECPR2O15040 1411 aa26.78■■□□□ 1.88
DDR1-236ENST00000431373 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
DDR1-236ENST00000431373 ROBO2Q9HCK4 1378 aa26.77■■□□□ 1.88
DDR1-236ENST00000431373 TOM1O60784 492 aa26.77■■□□□ 1.88
DDR1-236ENST00000431373 STK26Q9P289 416 aa26.77■■□□□ 1.88
DDR1-236ENST00000431373 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.76■■□□□ 1.88
DDR1-236ENST00000431373 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
DDR1-236ENST00000431373 NALCNQ8IZF0 1738 aa26.75■■□□□ 1.87
DDR1-236ENST00000431373 CCER1Q8TC90 406 aaPredicted RBP26.74■■□□□ 1.87
DDR1-236ENST00000431373 TRPM1Q7Z4N2 1603 aa26.72■■□□□ 1.87
DDR1-236ENST00000431373 C19orf44Q9H6X5 657 aa26.71■■□□□ 1.87
DDR1-236ENST00000431373 ADGRL3Q9HAR2 1447 aa26.71■■□□□ 1.87
DDR1-236ENST00000431373 DLC1Q96QB1 1528 aa26.7■■□□□ 1.86
DDR1-236ENST00000431373 DCCP43146 1447 aa26.68■■□□□ 1.86
DDR1-236ENST00000431373 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
DDR1-236ENST00000431373 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
DDR1-236ENST00000431373 PIP4K2BP78356 416 aa26.66■■□□□ 1.86
DDR1-236ENST00000431373 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
DDR1-236ENST00000431373 ARHGEF28Q8N1W1 1705 aaKnown RBP26.65■■□□□ 1.86
DDR1-236ENST00000431373 ATF3P18847 181 aa26.65■■□□□ 1.86
DDR1-236ENST00000431373 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
DDR1-236ENST00000431373 CADPS2Q86UW7 1296 aa26.65■■□□□ 1.86
DDR1-236ENST00000431373 PLEKHH1Q9ULM0 1364 aa26.64■■□□□ 1.86
DDR1-236ENST00000431373 NBPF1Q3BBV0 1214 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms