RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ATP7AQ04656 1500 aa17.65■□□□□ 0.42
SNRNP200-202ENST00000429650 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.42
SNRNP200-202ENST00000429650 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
SNRNP200-202ENST00000429650 MYOM1P52179 1685 aa17.63■□□□□ 0.41
SNRNP200-202ENST00000429650 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
SNRNP200-202ENST00000429650 KANK1Q14678 1352 aa17.62■□□□□ 0.41
SNRNP200-202ENST00000429650 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
SNRNP200-202ENST00000429650 FANCAO15360 1455 aa17.62■□□□□ 0.41
SNRNP200-202ENST00000429650 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
SNRNP200-202ENST00000429650 ASXL1Q8IXJ9 1541 aa17.61■□□□□ 0.41
SNRNP200-202ENST00000429650 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-202ENST00000429650 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
SNRNP200-202ENST00000429650 PLIN1O60240 522 aa17.61■□□□□ 0.41
SNRNP200-202ENST00000429650 EIF3AQ14152 1382 aaKnown RBP17.6■□□□□ 0.41
SNRNP200-202ENST00000429650 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
SNRNP200-202ENST00000429650 KIF3BO15066 747 aa17.58■□□□□ 0.41
SNRNP200-202ENST00000429650 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.41
SNRNP200-202ENST00000429650 KDM5AP29375 1690 aaKnown RBP17.58■□□□□ 0.4
SNRNP200-202ENST00000429650 PIK3C2GO75747 1445 aa17.58■□□□□ 0.4
SNRNP200-202ENST00000429650 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
SNRNP200-202ENST00000429650 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
SNRNP200-202ENST00000429650 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
SNRNP200-202ENST00000429650 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
SNRNP200-202ENST00000429650 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
SNRNP200-202ENST00000429650 ADGRL1O94910 1474 aa17.57■□□□□ 0.4
SNRNP200-202ENST00000429650 RTN4Q9NQC3 1192 aaKnown RBP17.56■□□□□ 0.4
SNRNP200-202ENST00000429650 MYOM2P54296 1465 aa17.56■□□□□ 0.4
SNRNP200-202ENST00000429650 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
SNRNP200-202ENST00000429650 UGGT1Q9NYU2 1555 aa17.56■□□□□ 0.4
SNRNP200-202ENST00000429650 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
SNRNP200-202ENST00000429650 MS4A1P11836 297 aa17.54■□□□□ 0.4
SNRNP200-202ENST00000429650 KIF1BO60333 1816 aa17.54■□□□□ 0.4
SNRNP200-202ENST00000429650 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
SNRNP200-202ENST00000429650 PDE4AP27815 886 aa17.53■□□□□ 0.4
SNRNP200-202ENST00000429650 EFCAB6Q5THR3 1501 aa17.53■□□□□ 0.4
SNRNP200-202ENST00000429650 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
SNRNP200-202ENST00000429650 CFAP70Q5T0N1 1121 aa17.53■□□□□ 0.4
SNRNP200-202ENST00000429650 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
SNRNP200-202ENST00000429650 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
SNRNP200-202ENST00000429650 ARXQ96QS3 562 aa17.52■□□□□ 0.4
SNRNP200-202ENST00000429650 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
SNRNP200-202ENST00000429650 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
SNRNP200-202ENST00000429650 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
SNRNP200-202ENST00000429650 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
SNRNP200-202ENST00000429650 KIDINS220Q9ULH0 1771 aa17.5■□□□□ 0.39
SNRNP200-202ENST00000429650 MROH2AA6NES4 1674 aa17.5■□□□□ 0.39
SNRNP200-202ENST00000429650 PPRC1Q5VV67 1664 aaKnown RBP17.5■□□□□ 0.39
SNRNP200-202ENST00000429650 NBR1Q14596 966 aa17.48■□□□□ 0.39
SNRNP200-202ENST00000429650 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
SNRNP200-202ENST00000429650 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
SNRNP200-202ENST00000429650 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
SNRNP200-202ENST00000429650 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
SNRNP200-202ENST00000429650 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
SNRNP200-202ENST00000429650 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
SNRNP200-202ENST00000429650 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
SNRNP200-202ENST00000429650 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
SNRNP200-202ENST00000429650 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
SNRNP200-202ENST00000429650 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
SNRNP200-202ENST00000429650 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
SNRNP200-202ENST00000429650 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
SNRNP200-202ENST00000429650 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
SNRNP200-202ENST00000429650 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
SNRNP200-202ENST00000429650 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
SNRNP200-202ENST00000429650 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-202ENST00000429650 APAF1O14727 1248 aa17.43■□□□□ 0.38
SNRNP200-202ENST00000429650 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
SNRNP200-202ENST00000429650 NOS1P29475 1434 aa17.42■□□□□ 0.38
SNRNP200-202ENST00000429650 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
SNRNP200-202ENST00000429650 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
SNRNP200-202ENST00000429650 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
SNRNP200-202ENST00000429650 CENPQQ7L2Z9 268 aaPredicted RBP17.4■□□□□ 0.38
SNRNP200-202ENST00000429650 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
SNRNP200-202ENST00000429650 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
SNRNP200-202ENST00000429650 PPLO60437 1756 aa17.39■□□□□ 0.37
SNRNP200-202ENST00000429650 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.37
SNRNP200-202ENST00000429650 NPATQ14207 1427 aa17.38■□□□□ 0.37
SNRNP200-202ENST00000429650 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
SNRNP200-202ENST00000429650 CFAP65Q6ZU64 1925 aaKnown RBP17.38■□□□□ 0.37
SNRNP200-202ENST00000429650 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
SNRNP200-202ENST00000429650 E9PSI1 815 aa17.37■□□□□ 0.37
SNRNP200-202ENST00000429650 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
SNRNP200-202ENST00000429650 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
SNRNP200-202ENST00000429650 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
SNRNP200-202ENST00000429650 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
SNRNP200-202ENST00000429650 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
SNRNP200-202ENST00000429650 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
SNRNP200-202ENST00000429650 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
SNRNP200-202ENST00000429650 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
SNRNP200-202ENST00000429650 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
SNRNP200-202ENST00000429650 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
SNRNP200-202ENST00000429650 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
SNRNP200-202ENST00000429650 DMRT2Q9Y5R5 561 aa17.34■□□□□ 0.37
SNRNP200-202ENST00000429650 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
SNRNP200-202ENST00000429650 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
SNRNP200-202ENST00000429650 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms