RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
SGMS1-203ENST00000429490 APBB1O00213 710 aa17.42■□□□□ 0.38
SGMS1-203ENST00000429490 TMEM132EQ6IEE7 984 aa17.42■□□□□ 0.38
SGMS1-203ENST00000429490 SAMD9Q5K651 1589 aa17.42■□□□□ 0.38
SGMS1-203ENST00000429490 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
SGMS1-203ENST00000429490 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
SGMS1-203ENST00000429490 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
SGMS1-203ENST00000429490 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
SGMS1-203ENST00000429490 SEC24BO95487 1268 aa17.4■□□□□ 0.38
SGMS1-203ENST00000429490 MTHFSP49914 203 aa17.4■□□□□ 0.38
SGMS1-203ENST00000429490 WDR62O43379 1518 aa17.39■□□□□ 0.38
SGMS1-203ENST00000429490 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
SGMS1-203ENST00000429490 KANK1Q14678 1352 aa17.39■□□□□ 0.37
SGMS1-203ENST00000429490 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
SGMS1-203ENST00000429490 GLIPR1L2Q4G1C9 344 aa17.38■□□□□ 0.37
SGMS1-203ENST00000429490 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
SGMS1-203ENST00000429490 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
SGMS1-203ENST00000429490 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
SGMS1-203ENST00000429490 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
SGMS1-203ENST00000429490 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
SGMS1-203ENST00000429490 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
SGMS1-203ENST00000429490 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
SGMS1-203ENST00000429490 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
SGMS1-203ENST00000429490 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
SGMS1-203ENST00000429490 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
SGMS1-203ENST00000429490 GOLGA6L22H0YM25 854 aa17.34■□□□□ 0.37
SGMS1-203ENST00000429490 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
SGMS1-203ENST00000429490 DZIP1LQ8IYY4 767 aaKnown RBP17.34■□□□□ 0.37
SGMS1-203ENST00000429490 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
SGMS1-203ENST00000429490 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
SGMS1-203ENST00000429490 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
SGMS1-203ENST00000429490 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
SGMS1-203ENST00000429490 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.36
SGMS1-203ENST00000429490 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
SGMS1-203ENST00000429490 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.36
SGMS1-203ENST00000429490 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
SGMS1-203ENST00000429490 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
SGMS1-203ENST00000429490 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
SGMS1-203ENST00000429490 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
SGMS1-203ENST00000429490 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
SGMS1-203ENST00000429490 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
SGMS1-203ENST00000429490 ARID3AQ99856 593 aa17.3■□□□□ 0.36
SGMS1-203ENST00000429490 SOX12O15370 315 aa17.29■□□□□ 0.36
SGMS1-203ENST00000429490 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
SGMS1-203ENST00000429490 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
SGMS1-203ENST00000429490 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
SGMS1-203ENST00000429490 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
SGMS1-203ENST00000429490 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 TRAK2O60296 914 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
SGMS1-203ENST00000429490 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.36
SGMS1-203ENST00000429490 DISP1Q96F81 1524 aa17.27■□□□□ 0.36
SGMS1-203ENST00000429490 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
SGMS1-203ENST00000429490 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
SGMS1-203ENST00000429490 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
SGMS1-203ENST00000429490 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
SGMS1-203ENST00000429490 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
SGMS1-203ENST00000429490 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
SGMS1-203ENST00000429490 RLBP1P12271 317 aa17.26■□□□□ 0.35
SGMS1-203ENST00000429490 FOXD4L5Q5VV16 416 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-203ENST00000429490 FOXD4L4Q8WXT5 416 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-203ENST00000429490 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
SGMS1-203ENST00000429490 RIPK4P57078 832 aa17.25■□□□□ 0.35
SGMS1-203ENST00000429490 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
SGMS1-203ENST00000429490 KDM5CP41229 1560 aa17.25■□□□□ 0.35
SGMS1-203ENST00000429490 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
SGMS1-203ENST00000429490 ATP10BO94823 1461 aa17.24■□□□□ 0.35
SGMS1-203ENST00000429490 KIF14Q15058 1648 aa17.24■□□□□ 0.35
SGMS1-203ENST00000429490 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
SGMS1-203ENST00000429490 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
SGMS1-203ENST00000429490 MCM4P33991 863 aa17.23■□□□□ 0.35
SGMS1-203ENST00000429490 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
SGMS1-203ENST00000429490 PANK2Q9BZ23 570 aa17.22■□□□□ 0.35
SGMS1-203ENST00000429490 DDX19BQ9UMR2 479 aa17.22■□□□□ 0.35
SGMS1-203ENST00000429490 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
SGMS1-203ENST00000429490 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
SGMS1-203ENST00000429490 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.35
SGMS1-203ENST00000429490 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
SGMS1-203ENST00000429490 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
SGMS1-203ENST00000429490 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
SGMS1-203ENST00000429490 NOL8Q76FK4 1167 aaKnown RBP17.2■□□□□ 0.34
SGMS1-203ENST00000429490 HMOX1P09601 288 aa17.2■□□□□ 0.34
SGMS1-203ENST00000429490 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
SGMS1-203ENST00000429490 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
SGMS1-203ENST00000429490 DDX11L8A8MPP1 907 aa17.19■□□□□ 0.34
SGMS1-203ENST00000429490 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
SGMS1-203ENST00000429490 A2MP01023 1474 aa17.19■□□□□ 0.34
SGMS1-203ENST00000429490 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
SGMS1-203ENST00000429490 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
SGMS1-203ENST00000429490 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
SGMS1-203ENST00000429490 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
SGMS1-203ENST00000429490 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
SGMS1-203ENST00000429490 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
SGMS1-203ENST00000429490 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
SGMS1-203ENST00000429490 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
SGMS1-203ENST00000429490 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 659.5 ms