RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 TRPM2O94759 1503 aa16.08■□□□□ 0.16
ATG4B-210ENST00000428861 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
ATG4B-210ENST00000428861 CLTCL1P53675 1640 aa16.07■□□□□ 0.16
ATG4B-210ENST00000428861 STRCP1A6NGW2 1772 aa16.07■□□□□ 0.16
ATG4B-210ENST00000428861 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
ATG4B-210ENST00000428861 CPS1P31327 1500 aa16.04■□□□□ 0.16
ATG4B-210ENST00000428861 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
ATG4B-210ENST00000428861 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
ATG4B-210ENST00000428861 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
ATG4B-210ENST00000428861 PPP1R15AO75807 674 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-210ENST00000428861 ABCF1Q8NE71 845 aaKnown RBP eCLIP16■□□□□ 0.15
ATG4B-210ENST00000428861 BCANQ96GW7 911 aa16■□□□□ 0.15
ATG4B-210ENST00000428861 ADAMTS13Q76LX8 1427 aa16■□□□□ 0.15
ATG4B-210ENST00000428861 HDGFP51858 240 aaKnown RBP15.99■□□□□ 0.15
ATG4B-210ENST00000428861 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
ATG4B-210ENST00000428861 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
ATG4B-210ENST00000428861 UBAP1LF5GYI3 381 aa15.97■□□□□ 0.15
ATG4B-210ENST00000428861 KCNA6P17658 529 aa15.97■□□□□ 0.15
ATG4B-210ENST00000428861 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
ATG4B-210ENST00000428861 TBX22Q9Y458 520 aa15.96■□□□□ 0.15
ATG4B-210ENST00000428861 ALKQ9UM73 1620 aa15.95■□□□□ 0.14
ATG4B-210ENST00000428861 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
ATG4B-210ENST00000428861 KIF1BO60333 1816 aa15.95■□□□□ 0.14
ATG4B-210ENST00000428861 HRCP23327 699 aa15.94■□□□□ 0.14
ATG4B-210ENST00000428861 NWD1Q149M9 1564 aa15.94■□□□□ 0.14
ATG4B-210ENST00000428861 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
ATG4B-210ENST00000428861 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
ATG4B-210ENST00000428861 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
ATG4B-210ENST00000428861 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
ATG4B-210ENST00000428861 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
ATG4B-210ENST00000428861 PTPRUQ92729 1446 aa15.92■□□□□ 0.14
ATG4B-210ENST00000428861 SETBP1Q9Y6X0 1596 aa15.92■□□□□ 0.14
ATG4B-210ENST00000428861 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
ATG4B-210ENST00000428861 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
ATG4B-210ENST00000428861 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-210ENST00000428861 METP08581 1390 aa15.89■□□□□ 0.13
ATG4B-210ENST00000428861 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
ATG4B-210ENST00000428861 DIP2AQ14689 1571 aa15.89■□□□□ 0.13
ATG4B-210ENST00000428861 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
ATG4B-210ENST00000428861 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
ATG4B-210ENST00000428861 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
ATG4B-210ENST00000428861 TOM1O60784 492 aa15.87■□□□□ 0.13
ATG4B-210ENST00000428861 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
ATG4B-210ENST00000428861 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
ATG4B-210ENST00000428861 PPLO60437 1756 aa15.87■□□□□ 0.13
ATG4B-210ENST00000428861 PIK3R4Q99570 1358 aa15.87■□□□□ 0.13
ATG4B-210ENST00000428861 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-210ENST00000428861 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
ATG4B-210ENST00000428861 SETD1AO15047 1707 aaKnown RBP15.83■□□□□ 0.13
ATG4B-210ENST00000428861 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
ATG4B-210ENST00000428861 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
ATG4B-210ENST00000428861 HSPA1LP34931 641 aa15.81■□□□□ 0.12
ATG4B-210ENST00000428861 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
ATG4B-210ENST00000428861 MSH6P52701 1360 aa15.78■□□□□ 0.12
ATG4B-210ENST00000428861 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.12
ATG4B-210ENST00000428861 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.11
ATG4B-210ENST00000428861 NRXN1Q9ULB1 1477 aa15.77■□□□□ 0.11
ATG4B-210ENST00000428861 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
ATG4B-210ENST00000428861 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-210ENST00000428861 TMEM132EQ6IEE7 984 aa15.76■□□□□ 0.11
ATG4B-210ENST00000428861 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
ATG4B-210ENST00000428861 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
ATG4B-210ENST00000428861 C19orf44Q9H6X5 657 aa15.75■□□□□ 0.11
ATG4B-210ENST00000428861 MYOM2P54296 1465 aa15.75■□□□□ 0.11
ATG4B-210ENST00000428861 CFAP70Q5T0N1 1121 aa15.74■□□□□ 0.11
ATG4B-210ENST00000428861 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
ATG4B-210ENST00000428861 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-210ENST00000428861 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
ATG4B-210ENST00000428861 SLAIN2Q9P270 581 aa15.73■□□□□ 0.11
ATG4B-210ENST00000428861 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
ATG4B-210ENST00000428861 PRAG1Q86YV5 1406 aa15.73■□□□□ 0.11
ATG4B-210ENST00000428861 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
ATG4B-210ENST00000428861 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
ATG4B-210ENST00000428861 STK26Q9P289 416 aa15.71■□□□□ 0.11
ATG4B-210ENST00000428861 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
ATG4B-210ENST00000428861 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
ATG4B-210ENST00000428861 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
ATG4B-210ENST00000428861 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
ATG4B-210ENST00000428861 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
ATG4B-210ENST00000428861 ATF3P18847 181 aa15.69■□□□□ 0.1
ATG4B-210ENST00000428861 WAPLQ7Z5K2 1190 aa15.69■□□□□ 0.1
ATG4B-210ENST00000428861 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
ATG4B-210ENST00000428861 TECPR2O15040 1411 aa15.68■□□□□ 0.1
ATG4B-210ENST00000428861 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
ATG4B-210ENST00000428861 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
ATG4B-210ENST00000428861 DCCP43146 1447 aa15.68■□□□□ 0.1
ATG4B-210ENST00000428861 MST1RQ04912 1400 aa15.68■□□□□ 0.1
ATG4B-210ENST00000428861 YTHDC2Q9H6S0 1430 aaKnown RBP15.68■□□□□ 0.1
ATG4B-210ENST00000428861 ADGRB1O14514 1584 aa15.66■□□□□ 0.1
ATG4B-210ENST00000428861 BRINP3Q76B58 766 aa15.65■□□□□ 0.1
ATG4B-210ENST00000428861 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
ATG4B-210ENST00000428861 LAMC1P11047 1609 aa15.62■□□□□ 0.09
ATG4B-210ENST00000428861 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
ATG4B-210ENST00000428861 C1orf167Q5SNV9 1468 aa15.61■□□□□ 0.09
ATG4B-210ENST00000428861 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
ATG4B-210ENST00000428861 DDX17Q92841 729 aaKnown RBP15.61■□□□□ 0.09
ATG4B-210ENST00000428861 SIRT1Q96EB6 747 aa15.61■□□□□ 0.09
ATG4B-210ENST00000428861 STAC3Q96MF2 364 aa15.61■□□□□ 0.09
ATG4B-210ENST00000428861 DISP3Q9P2K9 1392 aa15.61■□□□□ 0.09
ATG4B-210ENST00000428861 PRAM1Q96QH2 718 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms