RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 SLIT1O75093 1534 aa22.55■■□□□ 1.2
PHF1-203ENST00000427004 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
PHF1-203ENST00000427004 NEXMIFQ5QGS0 1516 aa22.54■■□□□ 1.2
PHF1-203ENST00000427004 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
PHF1-203ENST00000427004 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
PHF1-203ENST00000427004 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
PHF1-203ENST00000427004 PPLO60437 1756 aa22.53■■□□□ 1.2
PHF1-203ENST00000427004 TXNDC2Q86VQ3 553 aa22.53■■□□□ 1.2
PHF1-203ENST00000427004 IFT172Q9UG01 1749 aa22.52■■□□□ 1.2
PHF1-203ENST00000427004 IQGAP1P46940 1657 aa22.5■■□□□ 1.19
PHF1-203ENST00000427004 SCAF11Q99590 1463 aaKnown RBP22.5■■□□□ 1.19
PHF1-203ENST00000427004 ANKLE2Q86XL3 938 aa22.48■■□□□ 1.19
PHF1-203ENST00000427004 NPHP4O75161 1426 aaPredicted RBP22.47■■□□□ 1.19
PHF1-203ENST00000427004 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
PHF1-203ENST00000427004 PPP1R15AO75807 674 aaPredicted RBP22.45■■□□□ 1.18
PHF1-203ENST00000427004 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
PHF1-203ENST00000427004 BCANQ96GW7 911 aa22.44■■□□□ 1.18
PHF1-203ENST00000427004 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
PHF1-203ENST00000427004 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
PHF1-203ENST00000427004 ADGRF5Q8IZF2 1346 aa22.43■■□□□ 1.18
PHF1-203ENST00000427004 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
PHF1-203ENST00000427004 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
PHF1-203ENST00000427004 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
PHF1-203ENST00000427004 MED14O60244 1454 aa22.41■■□□□ 1.18
PHF1-203ENST00000427004 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
PHF1-203ENST00000427004 ADAMTS13Q76LX8 1427 aa22.37■■□□□ 1.17
PHF1-203ENST00000427004 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
PHF1-203ENST00000427004 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
PHF1-203ENST00000427004 ZNF335Q9H4Z2 1342 aaPredicted RBP22.36■■□□□ 1.17
PHF1-203ENST00000427004 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
PHF1-203ENST00000427004 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
PHF1-203ENST00000427004 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
PHF1-203ENST00000427004 SETBP1Q9Y6X0 1596 aa22.32■■□□□ 1.16
PHF1-203ENST00000427004 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
PHF1-203ENST00000427004 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
PHF1-203ENST00000427004 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
PHF1-203ENST00000427004 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
PHF1-203ENST00000427004 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
PHF1-203ENST00000427004 MYOM2P54296 1465 aa22.28■■□□□ 1.16
PHF1-203ENST00000427004 METP08581 1390 aa22.28■■□□□ 1.16
PHF1-203ENST00000427004 VGFO15240 615 aaPredicted RBP22.28■■□□□ 1.16
PHF1-203ENST00000427004 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
PHF1-203ENST00000427004 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
PHF1-203ENST00000427004 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
PHF1-203ENST00000427004 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
PHF1-203ENST00000427004 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.16
PHF1-203ENST00000427004 NRXN1Q9ULB1 1477 aa22.27■■□□□ 1.16
PHF1-203ENST00000427004 LTBP4Q8N2S1 1624 aa22.26■■□□□ 1.15
PHF1-203ENST00000427004 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
PHF1-203ENST00000427004 NBPF8Q3BBV2 869 aa22.24■■□□□ 1.15
PHF1-203ENST00000427004 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
PHF1-203ENST00000427004 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
PHF1-203ENST00000427004 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
PHF1-203ENST00000427004 STK26Q9P289 416 aa22.2■■□□□ 1.14
PHF1-203ENST00000427004 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
PHF1-203ENST00000427004 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
PHF1-203ENST00000427004 NWD1Q149M9 1564 aa22.19■■□□□ 1.14
PHF1-203ENST00000427004 XRN1Q8IZH2 1706 aaKnown RBP22.19■■□□□ 1.14
PHF1-203ENST00000427004 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
PHF1-203ENST00000427004 KCNA6P17658 529 aa22.18■■□□□ 1.14
PHF1-203ENST00000427004 C14orf93Q9H972 538 aaKnown RBP22.17■■□□□ 1.14
PHF1-203ENST00000427004 AMOTL2Q9Y2J4 779 aa22.16■■□□□ 1.14
PHF1-203ENST00000427004 LAMC1P11047 1609 aa22.15■■□□□ 1.14
PHF1-203ENST00000427004 ADGRB1O14514 1584 aa22.15■■□□□ 1.14
PHF1-203ENST00000427004 LRRC7Q96NW7 1537 aa22.14■■□□□ 1.13
PHF1-203ENST00000427004 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
PHF1-203ENST00000427004 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
PHF1-203ENST00000427004 PLEKHH1Q9ULM0 1364 aa22.11■■□□□ 1.13
PHF1-203ENST00000427004 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
PHF1-203ENST00000427004 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
PHF1-203ENST00000427004 KIAA1210Q9ULL0 1709 aa22.1■■□□□ 1.13
PHF1-203ENST00000427004 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
PHF1-203ENST00000427004 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
PHF1-203ENST00000427004 TRAK1Q9UPV9 953 aa22.08■■□□□ 1.13
PHF1-203ENST00000427004 TMEM94Q12767 1356 aa22.08■■□□□ 1.12
PHF1-203ENST00000427004 KNDC1Q76NI1 1749 aa22.08■■□□□ 1.12
PHF1-203ENST00000427004 CPS1P31327 1500 aa22.07■■□□□ 1.12
PHF1-203ENST00000427004 NALCNQ8IZF0 1738 aa22.07■■□□□ 1.12
PHF1-203ENST00000427004 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
PHF1-203ENST00000427004 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
PHF1-203ENST00000427004 NKTRP30414 1462 aaKnown RBP22.05■■□□□ 1.12
PHF1-203ENST00000427004 PIK3R4Q99570 1358 aa22.05■■□□□ 1.12
PHF1-203ENST00000427004 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
PHF1-203ENST00000427004 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
PHF1-203ENST00000427004 ROCK2O75116 1388 aaKnown RBP22.02■■□□□ 1.12
PHF1-203ENST00000427004 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
PHF1-203ENST00000427004 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
PHF1-203ENST00000427004 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
PHF1-203ENST00000427004 PRAM1Q96QH2 718 aa21.99■■□□□ 1.11
PHF1-203ENST00000427004 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
PHF1-203ENST00000427004 TECPR2O15040 1411 aa21.98■■□□□ 1.11
PHF1-203ENST00000427004 PTCH1Q13635 1447 aa21.98■■□□□ 1.11
PHF1-203ENST00000427004 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
PHF1-203ENST00000427004 DISP3Q9P2K9 1392 aa21.96■■□□□ 1.11
PHF1-203ENST00000427004 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
PHF1-203ENST00000427004 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
PHF1-203ENST00000427004 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
PHF1-203ENST00000427004 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
PHF1-203ENST00000427004 QRICH2Q9H0J4 1663 aa21.94■■□□□ 1.1
PHF1-203ENST00000427004 ILDR2Q71H61 639 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms