RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
AFF3-206ENST00000423966 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
AFF3-206ENST00000423966 TRPM2O94759 1503 aa13.67□□□□□ -0.22
AFF3-206ENST00000423966 PTPRTO14522 1441 aa13.66□□□□□ -0.22
AFF3-206ENST00000423966 MROH2AA6NES4 1674 aa13.65□□□□□ -0.22
AFF3-206ENST00000423966 NPATQ14207 1427 aa13.64□□□□□ -0.23
AFF3-206ENST00000423966 KIF1BO60333 1816 aa13.64□□□□□ -0.23
AFF3-206ENST00000423966 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
AFF3-206ENST00000423966 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
AFF3-206ENST00000423966 PLA2R1Q13018 1463 aa13.63□□□□□ -0.23
AFF3-206ENST00000423966 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
AFF3-206ENST00000423966 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
AFF3-206ENST00000423966 NOS1P29475 1434 aa13.6□□□□□ -0.23
AFF3-206ENST00000423966 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
AFF3-206ENST00000423966 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
AFF3-206ENST00000423966 SLC52A1Q9NWF4 448 aa13.59□□□□□ -0.23
AFF3-206ENST00000423966 ZMYM3Q14202 1370 aa13.58□□□□□ -0.23
AFF3-206ENST00000423966 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
AFF3-206ENST00000423966 STAC3Q96MF2 364 aa13.58□□□□□ -0.24
AFF3-206ENST00000423966 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
AFF3-206ENST00000423966 SYNMO15061 1565 aa13.56□□□□□ -0.24
AFF3-206ENST00000423966 SPATA31D1Q6ZQQ2 1576 aa13.56□□□□□ -0.24
AFF3-206ENST00000423966 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
AFF3-206ENST00000423966 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
AFF3-206ENST00000423966 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
AFF3-206ENST00000423966 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
AFF3-206ENST00000423966 SPATA31E1Q6ZUB1 1445 aa13.54□□□□□ -0.24
AFF3-206ENST00000423966 C3P01024 1663 aa13.53□□□□□ -0.24
AFF3-206ENST00000423966 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
AFF3-206ENST00000423966 CHGAP10645 457 aaKnown RBP13.53□□□□□ -0.24
AFF3-206ENST00000423966 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
AFF3-206ENST00000423966 UGGT1Q9NYU2 1555 aa13.53□□□□□ -0.24
AFF3-206ENST00000423966 MADDQ8WXG6 1647 aa13.53□□□□□ -0.24
AFF3-206ENST00000423966 ZBTB22O15209 634 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 POTEIP0CG38 1075 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.25
AFF3-206ENST00000423966 FBXO31Q5XUX0 539 aaPredicted RBP13.52□□□□□ -0.25
AFF3-206ENST00000423966 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 RPGRIP1LQ68CZ1 1315 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 TNRQ92752 1358 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
AFF3-206ENST00000423966 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
AFF3-206ENST00000423966 IDI1Q13907 227 aa13.5□□□□□ -0.25
AFF3-206ENST00000423966 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
AFF3-206ENST00000423966 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
AFF3-206ENST00000423966 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
AFF3-206ENST00000423966 UHRF1BP1Q6BDS2 1440 aa13.49□□□□□ -0.25
AFF3-206ENST00000423966 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
AFF3-206ENST00000423966 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
AFF3-206ENST00000423966 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
AFF3-206ENST00000423966 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
AFF3-206ENST00000423966 IFT172Q9UG01 1749 aa13.48□□□□□ -0.25
AFF3-206ENST00000423966 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
AFF3-206ENST00000423966 PPLO60437 1756 aa13.48□□□□□ -0.25
AFF3-206ENST00000423966 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.25
AFF3-206ENST00000423966 MYOM2P54296 1465 aa13.46□□□□□ -0.25
AFF3-206ENST00000423966 PRAG1Q86YV5 1406 aa13.46□□□□□ -0.26
AFF3-206ENST00000423966 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
AFF3-206ENST00000423966 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
AFF3-206ENST00000423966 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
AFF3-206ENST00000423966 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
AFF3-206ENST00000423966 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
AFF3-206ENST00000423966 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
AFF3-206ENST00000423966 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
AFF3-206ENST00000423966 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
AFF3-206ENST00000423966 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
AFF3-206ENST00000423966 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
AFF3-206ENST00000423966 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
AFF3-206ENST00000423966 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
AFF3-206ENST00000423966 NEXMIFQ5QGS0 1516 aa13.41□□□□□ -0.26
AFF3-206ENST00000423966 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
AFF3-206ENST00000423966 MYO3AQ8NEV4 1616 aa13.41□□□□□ -0.26
AFF3-206ENST00000423966 PTPRMP28827 1452 aa13.41□□□□□ -0.26
AFF3-206ENST00000423966 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
AFF3-206ENST00000423966 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
AFF3-206ENST00000423966 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
AFF3-206ENST00000423966 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
AFF3-206ENST00000423966 LAMC1P11047 1609 aa13.39□□□□□ -0.27
AFF3-206ENST00000423966 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
AFF3-206ENST00000423966 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
AFF3-206ENST00000423966 ZNF142P52746 1687 aaPredicted RBP13.38□□□□□ -0.27
AFF3-206ENST00000423966 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
AFF3-206ENST00000423966 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
AFF3-206ENST00000423966 ADGRF5Q8IZF2 1346 aa13.37□□□□□ -0.27
AFF3-206ENST00000423966 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
AFF3-206ENST00000423966 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
AFF3-206ENST00000423966 GPRASP1Q5JY77 1395 aa13.35□□□□□ -0.27
AFF3-206ENST00000423966 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
AFF3-206ENST00000423966 SLIT1O75093 1534 aa13.34□□□□□ -0.27
AFF3-206ENST00000423966 USP47Q96K76 1375 aa13.33□□□□□ -0.27
AFF3-206ENST00000423966 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
AFF3-206ENST00000423966 HSPA5P11021 654 aaKnown RBP13.33□□□□□ -0.28
AFF3-206ENST00000423966 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
AFF3-206ENST00000423966 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.28
AFF3-206ENST00000423966 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
AFF3-206ENST00000423966 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
AFF3-206ENST00000423966 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
AFF3-206ENST00000423966 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
AFF3-206ENST00000423966 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
AFF3-206ENST00000423966 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms