RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 TRPM2O94759 1503 aa31.84■■■□□ 2.69
FNDC3B-204ENST00000421757 RAB3GAP2Q9H2M9 1393 aa31.83■■■□□ 2.69
FNDC3B-204ENST00000421757 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.83■■■□□ 2.69
FNDC3B-204ENST00000421757 SENP3Q9H4L4 574 aaPredicted RBP31.83■■■□□ 2.69
FNDC3B-204ENST00000421757 ZFYVE9O95405 1425 aa31.83■■■□□ 2.69
FNDC3B-204ENST00000421757 FOXD1Q16676 465 aa31.82■■■□□ 2.68
FNDC3B-204ENST00000421757 ZNF326Q5BKZ1 582 aaKnown RBP31.81■■■□□ 2.68
FNDC3B-204ENST00000421757 NUTM2DQ5VT03 806 aaPredicted RBP31.81■■■□□ 2.68
FNDC3B-204ENST00000421757 SLC26A8Q96RN1 970 aa31.8■■■□□ 2.68
FNDC3B-204ENST00000421757 CPS1P31327 1500 aa31.8■■■□□ 2.68
FNDC3B-204ENST00000421757 CLTCL1P53675 1640 aa31.78■■■□□ 2.68
FNDC3B-204ENST00000421757 IQSEC2Q5JU85 1478 aa31.78■■■□□ 2.68
FNDC3B-204ENST00000421757 PLEKHG1Q9ULL1 1385 aa31.75■■■□□ 2.67
FNDC3B-204ENST00000421757 KIF1BO60333 1816 aa31.69■■■□□ 2.66
FNDC3B-204ENST00000421757 STRCP1A6NGW2 1772 aa31.67■■■□□ 2.66
FNDC3B-204ENST00000421757 UBAP1LF5GYI3 381 aa31.66■■■□□ 2.66
FNDC3B-204ENST00000421757 CCDC144AA2RUR9 1427 aa31.66■■■□□ 2.66
FNDC3B-204ENST00000421757 KCNA6P17658 529 aa31.64■■■□□ 2.66
FNDC3B-204ENST00000421757 HRCP23327 699 aa31.63■■■□□ 2.65
FNDC3B-204ENST00000421757 LRRC7Q96NW7 1537 aa31.63■■■□□ 2.65
FNDC3B-204ENST00000421757 TBX22Q9Y458 520 aa31.62■■■□□ 2.65
FNDC3B-204ENST00000421757 NEXMIFQ5QGS0 1516 aa31.59■■■□□ 2.65
FNDC3B-204ENST00000421757 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
FNDC3B-204ENST00000421757 TOM1O60784 492 aa31.56■■■□□ 2.64
FNDC3B-204ENST00000421757 RPGRIP1LQ68CZ1 1315 aa31.55■■■□□ 2.64
FNDC3B-204ENST00000421757 PROSER2Q86WR7 435 aaPredicted RBP31.55■■■□□ 2.64
FNDC3B-204ENST00000421757 DIP2AQ14689 1571 aa31.55■■■□□ 2.64
FNDC3B-204ENST00000421757 VGFO15240 615 aaPredicted RBP31.54■■■□□ 2.64
FNDC3B-204ENST00000421757 RGL3Q3MIN7 710 aa31.54■■■□□ 2.64
FNDC3B-204ENST00000421757 SCAF1Q9H7N4 1312 aaKnown RBP31.52■■■□□ 2.64
FNDC3B-204ENST00000421757 NWD1Q149M9 1564 aa31.51■■■□□ 2.63
FNDC3B-204ENST00000421757 PIP4K2BP78356 416 aa31.5■■■□□ 2.63
FNDC3B-204ENST00000421757 RBM33Q96EV2 1170 aaKnown RBP31.5■■■□□ 2.63
FNDC3B-204ENST00000421757 NKTRP30414 1462 aaKnown RBP31.5■■■□□ 2.63
FNDC3B-204ENST00000421757 SETBP1Q9Y6X0 1596 aa31.5■■■□□ 2.63
FNDC3B-204ENST00000421757 TMEM94Q12767 1356 aa31.49■■■□□ 2.63
FNDC3B-204ENST00000421757 PIK3R4Q99570 1358 aa31.48■■■□□ 2.63
FNDC3B-204ENST00000421757 CHD2O14647 1828 aaKnown RBP31.47■■■□□ 2.63
FNDC3B-204ENST00000421757 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
FNDC3B-204ENST00000421757 SPATA31E1Q6ZUB1 1445 aa31.46■■■□□ 2.63
FNDC3B-204ENST00000421757 AMOTL2Q9Y2J4 779 aa31.44■■■□□ 2.62
FNDC3B-204ENST00000421757 ANKRD30BQ9BXX2 1392 aa31.43■■■□□ 2.62
FNDC3B-204ENST00000421757 PPLO60437 1756 aa31.42■■■□□ 2.62
FNDC3B-204ENST00000421757 XIRP1Q702N8 1843 aaKnown RBP31.41■■■□□ 2.62
FNDC3B-204ENST00000421757 METP08581 1390 aa31.41■■■□□ 2.62
FNDC3B-204ENST00000421757 PTPRUQ92729 1446 aa31.4■■■□□ 2.62
FNDC3B-204ENST00000421757 C14orf37Q86TY3 774 aa31.37■■■□□ 2.61
FNDC3B-204ENST00000421757 ADGRF5Q8IZF2 1346 aa31.36■■■□□ 2.61
FNDC3B-204ENST00000421757 MSH6P52701 1360 aa31.35■■■□□ 2.61
FNDC3B-204ENST00000421757 TRIM26Q12899 539 aaPredicted RBP31.35■■■□□ 2.61
FNDC3B-204ENST00000421757 ALKQ9UM73 1620 aa31.35■■■□□ 2.61
FNDC3B-204ENST00000421757 IFT172Q9UG01 1749 aa31.3■■■□□ 2.6
FNDC3B-204ENST00000421757 NCOA3Q9Y6Q9 1424 aa31.29■■■□□ 2.6
FNDC3B-204ENST00000421757 XRN1Q8IZH2 1706 aaKnown RBP31.28■■■□□ 2.6
FNDC3B-204ENST00000421757 HSPA1LP34931 641 aa31.25■■■□□ 2.59
FNDC3B-204ENST00000421757 SETD1AO15047 1707 aaKnown RBP31.24■■■□□ 2.59
FNDC3B-204ENST00000421757 C19orf44Q9H6X5 657 aa31.23■■■□□ 2.59
FNDC3B-204ENST00000421757 PIK3C2GO75747 1445 aa31.23■■■□□ 2.59
FNDC3B-204ENST00000421757 ATF3P18847 181 aa31.21■■■□□ 2.59
FNDC3B-204ENST00000421757 DCAF11Q8TEB1 546 aa31.2■■■□□ 2.59
FNDC3B-204ENST00000421757 KDM2AQ9Y2K7 1162 aa31.2■■■□□ 2.59
FNDC3B-204ENST00000421757 MYOM2P54296 1465 aa31.2■■■□□ 2.58
FNDC3B-204ENST00000421757 SLAIN2Q9P270 581 aa31.19■■■□□ 2.58
FNDC3B-204ENST00000421757 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
FNDC3B-204ENST00000421757 TMEM132EQ6IEE7 984 aa31.17■■■□□ 2.58
FNDC3B-204ENST00000421757 STK26Q9P289 416 aa31.16■■■□□ 2.58
FNDC3B-204ENST00000421757 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
FNDC3B-204ENST00000421757 FAM135BQ49AJ0 1406 aa31.15■■■□□ 2.58
FNDC3B-204ENST00000421757 ROBO2Q9HCK4 1378 aa31.15■■■□□ 2.58
FNDC3B-204ENST00000421757 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.15■■■□□ 2.58
FNDC3B-204ENST00000421757 NRXN1Q9ULB1 1477 aa31.14■■■□□ 2.58
FNDC3B-204ENST00000421757 CFAP70Q5T0N1 1121 aa31.14■■■□□ 2.58
FNDC3B-204ENST00000421757 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.58
FNDC3B-204ENST00000421757 STAC3Q96MF2 364 aa31.1■■■□□ 2.57
FNDC3B-204ENST00000421757 ROBO1Q9Y6N7 1651 aa31.09■■■□□ 2.57
FNDC3B-204ENST00000421757 ADGRL3Q9HAR2 1447 aa31.09■■■□□ 2.57
FNDC3B-204ENST00000421757 LRPPRCP42704 1394 aaKnown RBP31.09■■■□□ 2.57
FNDC3B-204ENST00000421757 DHX57Q6P158 1386 aaKnown RBP31.09■■■□□ 2.57
FNDC3B-204ENST00000421757 DCCP43146 1447 aa31.08■■■□□ 2.57
FNDC3B-204ENST00000421757 PRAG1Q86YV5 1406 aa31.08■■■□□ 2.57
FNDC3B-204ENST00000421757 ASXL1Q8IXJ9 1541 aa31.08■■■□□ 2.57
FNDC3B-204ENST00000421757 LAMC1P11047 1609 aa31.06■■■□□ 2.56
FNDC3B-204ENST00000421757 YTHDC2Q9H6S0 1430 aaKnown RBP31.06■■■□□ 2.56
FNDC3B-204ENST00000421757 ABCC11Q96J66 1382 aa31.05■■■□□ 2.56
FNDC3B-204ENST00000421757 NALCNQ8IZF0 1738 aa31.04■■■□□ 2.56
FNDC3B-204ENST00000421757 SIN3AQ96ST3 1273 aa31.03■■■□□ 2.56
FNDC3B-204ENST00000421757 TECPR2O15040 1411 aa31.02■■■□□ 2.56
FNDC3B-204ENST00000421757 WAPLQ7Z5K2 1190 aa31.02■■■□□ 2.56
FNDC3B-204ENST00000421757 NEUROD1Q13562 356 aa31.01■■■□□ 2.55
FNDC3B-204ENST00000421757 MST1RQ04912 1400 aa30.98■■■□□ 2.55
FNDC3B-204ENST00000421757 KNDC1Q76NI1 1749 aa30.97■■■□□ 2.55
FNDC3B-204ENST00000421757 PLEKHH1Q9ULM0 1364 aa30.95■■■□□ 2.55
FNDC3B-204ENST00000421757 BRINP3Q76B58 766 aa30.95■■■□□ 2.55
FNDC3B-204ENST00000421757 DISP3Q9P2K9 1392 aa30.93■■■□□ 2.54
FNDC3B-204ENST00000421757 SIRT1Q96EB6 747 aa30.93■■■□□ 2.54
FNDC3B-204ENST00000421757 L3MBTL2Q969R5 705 aa30.91■■■□□ 2.54
FNDC3B-204ENST00000421757 TRAK1Q9UPV9 953 aa30.91■■■□□ 2.54
FNDC3B-204ENST00000421757 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
FNDC3B-204ENST00000421757 PHLPP1O60346 1717 aa30.9■■■□□ 2.54
FNDC3B-204ENST00000421757 PRAM1Q96QH2 718 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms