RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 WDR43Q15061 677 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHRD-204ENST00000420973 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
CHRD-204ENST00000420973 SHROOM2Q13796 1616 aa18.98■□□□□ 0.63
CHRD-204ENST00000420973 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
CHRD-204ENST00000420973 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
CHRD-204ENST00000420973 PNISRQ8TF01 805 aaKnown RBP18.97■□□□□ 0.63
CHRD-204ENST00000420973 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
CHRD-204ENST00000420973 TESK2Q96S53 571 aa18.97■□□□□ 0.63
CHRD-204ENST00000420973 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
CHRD-204ENST00000420973 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
CHRD-204ENST00000420973 ERBINQ96RT1 1412 aa18.96■□□□□ 0.62
CHRD-204ENST00000420973 FAM43AQ8N2R8 423 aa18.95■□□□□ 0.62
CHRD-204ENST00000420973 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
CHRD-204ENST00000420973 UGGT1Q9NYU2 1555 aa18.95■□□□□ 0.62
CHRD-204ENST00000420973 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
CHRD-204ENST00000420973 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
CHRD-204ENST00000420973 RALBP1Q15311 655 aa18.94■□□□□ 0.62
CHRD-204ENST00000420973 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
CHRD-204ENST00000420973 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
CHRD-204ENST00000420973 ABCC1P33527 1531 aa18.92■□□□□ 0.62
CHRD-204ENST00000420973 PLIN1O60240 522 aa18.91■□□□□ 0.62
CHRD-204ENST00000420973 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
CHRD-204ENST00000420973 ARXQ96QS3 562 aa18.9■□□□□ 0.62
CHRD-204ENST00000420973 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
CHRD-204ENST00000420973 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
CHRD-204ENST00000420973 POGKQ9P215 609 aa18.89■□□□□ 0.61
CHRD-204ENST00000420973 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
CHRD-204ENST00000420973 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
CHRD-204ENST00000420973 ATP7AQ04656 1500 aa18.88■□□□□ 0.61
CHRD-204ENST00000420973 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
CHRD-204ENST00000420973 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
CHRD-204ENST00000420973 CDCA8Q53HL2 280 aa18.88■□□□□ 0.61
CHRD-204ENST00000420973 IDI1Q13907 227 aa18.87■□□□□ 0.61
CHRD-204ENST00000420973 ADAMTS8Q9UP79 889 aa18.87■□□□□ 0.61
CHRD-204ENST00000420973 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
CHRD-204ENST00000420973 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
CHRD-204ENST00000420973 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
CHRD-204ENST00000420973 NOS1P29475 1434 aa18.85■□□□□ 0.61
CHRD-204ENST00000420973 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
CHRD-204ENST00000420973 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
CHRD-204ENST00000420973 KDM5CP41229 1560 aa18.84■□□□□ 0.61
CHRD-204ENST00000420973 PER1O15534 1290 aaPredicted RBP18.84■□□□□ 0.61
CHRD-204ENST00000420973 ATP10AO60312 1499 aa18.83■□□□□ 0.6
CHRD-204ENST00000420973 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.6
CHRD-204ENST00000420973 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
CHRD-204ENST00000420973 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
CHRD-204ENST00000420973 ZFYVE16Q7Z3T8 1539 aa18.81■□□□□ 0.6
CHRD-204ENST00000420973 KDM5DQ9BY66 1539 aa18.81■□□□□ 0.6
CHRD-204ENST00000420973 RGS3P49796 1198 aa18.81■□□□□ 0.6
CHRD-204ENST00000420973 ZNF518AQ6AHZ1 1483 aa18.8■□□□□ 0.6
CHRD-204ENST00000420973 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
CHRD-204ENST00000420973 YEATS2Q9ULM3 1422 aa18.79■□□□□ 0.6
CHRD-204ENST00000420973 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
CHRD-204ENST00000420973 SOX12O15370 315 aa18.78■□□□□ 0.6
CHRD-204ENST00000420973 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
CHRD-204ENST00000420973 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
CHRD-204ENST00000420973 APAF1O14727 1248 aa18.77■□□□□ 0.6
CHRD-204ENST00000420973 NFKBIBQ15653 356 aa18.77■□□□□ 0.59
CHRD-204ENST00000420973 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
CHRD-204ENST00000420973 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
CHRD-204ENST00000420973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHRD-204ENST00000420973 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
CHRD-204ENST00000420973 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
CHRD-204ENST00000420973 GGNBP2Q9H3C7 697 aa18.73■□□□□ 0.59
CHRD-204ENST00000420973 PRAM1Q96QH2 718 aa18.73■□□□□ 0.59
CHRD-204ENST00000420973 NPATQ14207 1427 aa18.73■□□□□ 0.59
CHRD-204ENST00000420973 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
CHRD-204ENST00000420973 FBLN1P23142 703 aa18.72■□□□□ 0.59
CHRD-204ENST00000420973 RRAGDQ9NQL2 400 aaPredicted RBP18.72■□□□□ 0.59
CHRD-204ENST00000420973 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
CHRD-204ENST00000420973 BBXQ8WY36 941 aaPredicted RBP18.72■□□□□ 0.59
CHRD-204ENST00000420973 CARD14Q9BXL6 1004 aa18.72■□□□□ 0.59
CHRD-204ENST00000420973 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
CHRD-204ENST00000420973 CEBPAP49715 358 aaPredicted RBP18.72■□□□□ 0.59
CHRD-204ENST00000420973 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
CHRD-204ENST00000420973 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
CHRD-204ENST00000420973 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
CHRD-204ENST00000420973 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
CHRD-204ENST00000420973 UNC13BO14795 1591 aa18.71■□□□□ 0.59
CHRD-204ENST00000420973 PAXIP1Q6ZW49 1069 aaPredicted RBP18.7■□□□□ 0.58
CHRD-204ENST00000420973 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
CHRD-204ENST00000420973 TSPOAP1O95153 1857 aa18.7■□□□□ 0.58
CHRD-204ENST00000420973 PRDM15P57071 1507 aaPredicted RBP18.7■□□□□ 0.58
CHRD-204ENST00000420973 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
CHRD-204ENST00000420973 E9PCH4 1651 aa18.69■□□□□ 0.58
CHRD-204ENST00000420973 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
CHRD-204ENST00000420973 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
CHRD-204ENST00000420973 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHRD-204ENST00000420973 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
CHRD-204ENST00000420973 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
CHRD-204ENST00000420973 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
CHRD-204ENST00000420973 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
CHRD-204ENST00000420973 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
CHRD-204ENST00000420973 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
CHRD-204ENST00000420973 MTHFSP49914 203 aa18.65■□□□□ 0.58
CHRD-204ENST00000420973 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
CHRD-204ENST00000420973 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
CHRD-204ENST00000420973 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
CHRD-204ENST00000420973 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
CHRD-204ENST00000420973 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms