RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
CHRD-204ENST00000420973 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
CHRD-204ENST00000420973 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
CHRD-204ENST00000420973 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
CHRD-204ENST00000420973 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
CHRD-204ENST00000420973 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
CHRD-204ENST00000420973 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
CHRD-204ENST00000420973 ABCC9O60706 1549 aa24.31■■□□□ 1.48
CHRD-204ENST00000420973 MYT1Q01538 1121 aa24■■□□□ 1.43
CHRD-204ENST00000420973 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
CHRD-204ENST00000420973 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
CHRD-204ENST00000420973 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
CHRD-204ENST00000420973 HRCP23327 699 aa23.7■■□□□ 1.38
CHRD-204ENST00000420973 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
CHRD-204ENST00000420973 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.362e-8■■■■□ 25.2
CHRD-204ENST00000420973 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
CHRD-204ENST00000420973 DCAF1Q9Y4B6 1507 aa23.48■■□□□ 1.35
CHRD-204ENST00000420973 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
CHRD-204ENST00000420973 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
CHRD-204ENST00000420973 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
CHRD-204ENST00000420973 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
CHRD-204ENST00000420973 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
CHRD-204ENST00000420973 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.29
CHRD-204ENST00000420973 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
CHRD-204ENST00000420973 NACADO15069 1562 aa23.11■■□□□ 1.29
CHRD-204ENST00000420973 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
CHRD-204ENST00000420973 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
CHRD-204ENST00000420973 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
CHRD-204ENST00000420973 WIZO95785 1651 aa22.75■■□□□ 1.23
CHRD-204ENST00000420973 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
CHRD-204ENST00000420973 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
CHRD-204ENST00000420973 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
CHRD-204ENST00000420973 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CHRD-204ENST00000420973 PRKCSHP14314 528 aaPredicted RBP22.42■■□□□ 1.18
CHRD-204ENST00000420973 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
CHRD-204ENST00000420973 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
CHRD-204ENST00000420973 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.17
CHRD-204ENST00000420973 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
CHRD-204ENST00000420973 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
CHRD-204ENST00000420973 TRIM26Q12899 539 aaPredicted RBP22.29■■□□□ 1.16
CHRD-204ENST00000420973 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
CHRD-204ENST00000420973 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
CHRD-204ENST00000420973 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
CHRD-204ENST00000420973 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
CHRD-204ENST00000420973 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
CHRD-204ENST00000420973 SOGA1O94964 1423 aa22.14■■□□□ 1.13
CHRD-204ENST00000420973 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
CHRD-204ENST00000420973 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
CHRD-204ENST00000420973 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
CHRD-204ENST00000420973 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
CHRD-204ENST00000420973 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
CHRD-204ENST00000420973 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
CHRD-204ENST00000420973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
CHRD-204ENST00000420973 ERICH6Q7L0X2 663 aa21.93■■□□□ 1.1
CHRD-204ENST00000420973 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
CHRD-204ENST00000420973 APLP2Q06481 763 aa21.88■■□□□ 1.09
CHRD-204ENST00000420973 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
CHRD-204ENST00000420973 ATP1B4Q9UN42 357 aaPredicted RBP21.82■■□□□ 1.08
CHRD-204ENST00000420973 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
CHRD-204ENST00000420973 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
CHRD-204ENST00000420973 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
CHRD-204ENST00000420973 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
CHRD-204ENST00000420973 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
CHRD-204ENST00000420973 ITGAEP38570 1179 aa21.64■■□□□ 1.05
CHRD-204ENST00000420973 ANP32EQ9BTT0 268 aa21.63■■□□□ 1.05
CHRD-204ENST00000420973 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
CHRD-204ENST00000420973 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
CHRD-204ENST00000420973 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
CHRD-204ENST00000420973 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
CHRD-204ENST00000420973 CLIP1P30622 1438 aa21.53■■□□□ 1.04
CHRD-204ENST00000420973 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
CHRD-204ENST00000420973 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.03
CHRD-204ENST00000420973 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
CHRD-204ENST00000420973 EEA1Q15075 1411 aa21.48■■□□□ 1.03
CHRD-204ENST00000420973 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
CHRD-204ENST00000420973 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
CHRD-204ENST00000420973 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.01
CHRD-204ENST00000420973 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
CHRD-204ENST00000420973 NESP48681 1621 aa21.37■■□□□ 1.01
CHRD-204ENST00000420973 CUX2O14529 1486 aa21.36■■□□□ 1.01
CHRD-204ENST00000420973 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
CHRD-204ENST00000420973 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
CHRD-204ENST00000420973 CUX1P39880 1505 aa21.3■■□□□ 1
CHRD-204ENST00000420973 CFTRP13569 1480 aa21.28■■□□□ 1
CHRD-204ENST00000420973 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
CHRD-204ENST00000420973 HMGXB3Q12766 1538 aa21.27■■□□□ 1
CHRD-204ENST00000420973 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
CHRD-204ENST00000420973 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
CHRD-204ENST00000420973 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
CHRD-204ENST00000420973 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
CHRD-204ENST00000420973 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
CHRD-204ENST00000420973 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
CHRD-204ENST00000420973 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
CHRD-204ENST00000420973 FBLN2P98095 1184 aa21.16■□□□□ 0.98
CHRD-204ENST00000420973 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
CHRD-204ENST00000420973 IGF1RP08069 1367 aa21.11■□□□□ 0.97
CHRD-204ENST00000420973 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
CHRD-204ENST00000420973 KIF21BO75037 1637 aa21.03■□□□□ 0.96
CHRD-204ENST00000420973 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
CHRD-204ENST00000420973 ARAP1Q96P48 1450 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms