RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.38
ATG4B-207ENST00000415107 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
ATG4B-207ENST00000415107 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
ATG4B-207ENST00000415107 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
ATG4B-207ENST00000415107 PPLO60437 1756 aa17.45■□□□□ 0.38
ATG4B-207ENST00000415107 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
ATG4B-207ENST00000415107 PLEKHG1Q9ULL1 1385 aa17.43■□□□□ 0.38
ATG4B-207ENST00000415107 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
ATG4B-207ENST00000415107 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-207ENST00000415107 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
ATG4B-207ENST00000415107 LTKP29376 864 aa17.42■□□□□ 0.38
ATG4B-207ENST00000415107 MYOM2P54296 1465 aa17.42■□□□□ 0.38
ATG4B-207ENST00000415107 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
ATG4B-207ENST00000415107 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
ATG4B-207ENST00000415107 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
ATG4B-207ENST00000415107 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
ATG4B-207ENST00000415107 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
ATG4B-207ENST00000415107 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
ATG4B-207ENST00000415107 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
ATG4B-207ENST00000415107 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-207ENST00000415107 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
ATG4B-207ENST00000415107 ADAMTS13Q76LX8 1427 aa17.36■□□□□ 0.37
ATG4B-207ENST00000415107 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
ATG4B-207ENST00000415107 SETD1AO15047 1707 aaKnown RBP17.33■□□□□ 0.37
ATG4B-207ENST00000415107 PIK3R4Q99570 1358 aa17.33■□□□□ 0.36
ATG4B-207ENST00000415107 PPP1R15AO75807 674 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-207ENST00000415107 LAMC1P11047 1609 aa17.32■□□□□ 0.36
ATG4B-207ENST00000415107 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
ATG4B-207ENST00000415107 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
ATG4B-207ENST00000415107 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
ATG4B-207ENST00000415107 RGL3Q3MIN7 710 aa17.3■□□□□ 0.36
ATG4B-207ENST00000415107 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
ATG4B-207ENST00000415107 ALKQ9UM73 1620 aa17.29■□□□□ 0.36
ATG4B-207ENST00000415107 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
ATG4B-207ENST00000415107 CPS1P31327 1500 aa17.27■□□□□ 0.36
ATG4B-207ENST00000415107 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
ATG4B-207ENST00000415107 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
ATG4B-207ENST00000415107 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.35
ATG4B-207ENST00000415107 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
ATG4B-207ENST00000415107 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
ATG4B-207ENST00000415107 XRN1Q8IZH2 1706 aaKnown RBP17.25■□□□□ 0.35
ATG4B-207ENST00000415107 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-207ENST00000415107 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
ATG4B-207ENST00000415107 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
ATG4B-207ENST00000415107 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
ATG4B-207ENST00000415107 DCAF11Q8TEB1 546 aa17.23■□□□□ 0.35
ATG4B-207ENST00000415107 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
ATG4B-207ENST00000415107 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
ATG4B-207ENST00000415107 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
ATG4B-207ENST00000415107 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
ATG4B-207ENST00000415107 ADGRB1O14514 1584 aa17.22■□□□□ 0.35
ATG4B-207ENST00000415107 TECPR2O15040 1411 aa17.21■□□□□ 0.35
ATG4B-207ENST00000415107 KCNA6P17658 529 aa17.21■□□□□ 0.35
ATG4B-207ENST00000415107 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-207ENST00000415107 KNDC1Q76NI1 1749 aa17.21■□□□□ 0.35
ATG4B-207ENST00000415107 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
ATG4B-207ENST00000415107 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.34
ATG4B-207ENST00000415107 METP08581 1390 aa17.2■□□□□ 0.34
ATG4B-207ENST00000415107 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
ATG4B-207ENST00000415107 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
ATG4B-207ENST00000415107 NCOA3Q9Y6Q9 1424 aa17.19■□□□□ 0.34
ATG4B-207ENST00000415107 BCANQ96GW7 911 aa17.18■□□□□ 0.34
ATG4B-207ENST00000415107 TRPM1Q7Z4N2 1603 aa17.17■□□□□ 0.34
ATG4B-207ENST00000415107 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
ATG4B-207ENST00000415107 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
ATG4B-207ENST00000415107 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
ATG4B-207ENST00000415107 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
ATG4B-207ENST00000415107 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
ATG4B-207ENST00000415107 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
ATG4B-207ENST00000415107 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
ATG4B-207ENST00000415107 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.33
ATG4B-207ENST00000415107 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
ATG4B-207ENST00000415107 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
ATG4B-207ENST00000415107 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
ATG4B-207ENST00000415107 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
ATG4B-207ENST00000415107 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
ATG4B-207ENST00000415107 DCCP43146 1447 aa17.08■□□□□ 0.32
ATG4B-207ENST00000415107 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
ATG4B-207ENST00000415107 ROBO2Q9HCK4 1378 aa17.08■□□□□ 0.32
ATG4B-207ENST00000415107 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
ATG4B-207ENST00000415107 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
ATG4B-207ENST00000415107 CERKQ8TCT0 537 aa17.07■□□□□ 0.32
ATG4B-207ENST00000415107 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-207ENST00000415107 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
ATG4B-207ENST00000415107 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
ATG4B-207ENST00000415107 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
ATG4B-207ENST00000415107 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
ATG4B-207ENST00000415107 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-207ENST00000415107 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
ATG4B-207ENST00000415107 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
ATG4B-207ENST00000415107 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
ATG4B-207ENST00000415107 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-207ENST00000415107 MSH6P52701 1360 aa17.01■□□□□ 0.31
ATG4B-207ENST00000415107 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
ATG4B-207ENST00000415107 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
ATG4B-207ENST00000415107 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
ATG4B-207ENST00000415107 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
ATG4B-207ENST00000415107 STK26Q9P289 416 aa16.97■□□□□ 0.31
ATG4B-207ENST00000415107 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
ATG4B-207ENST00000415107 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms