RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 SLC52A1Q9NWF4 448 aa15.72■□□□□ 0.11
CRAMP1-203ENST00000415022 TMEM2Q9UHN6 1383 aa15.72■□□□□ 0.11
CRAMP1-203ENST00000415022 IQGAP1P46940 1657 aa15.71■□□□□ 0.11
CRAMP1-203ENST00000415022 MED14O60244 1454 aa15.71■□□□□ 0.1
CRAMP1-203ENST00000415022 IFT172Q9UG01 1749 aa15.7■□□□□ 0.1
CRAMP1-203ENST00000415022 ANKRD30BQ9BXX2 1392 aa15.7■□□□□ 0.1
CRAMP1-203ENST00000415022 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
CRAMP1-203ENST00000415022 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
CRAMP1-203ENST00000415022 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
CRAMP1-203ENST00000415022 PPLO60437 1756 aa15.69■□□□□ 0.1
CRAMP1-203ENST00000415022 SCAF11Q99590 1463 aaKnown RBP15.68■□□□□ 0.1
CRAMP1-203ENST00000415022 SPATA31E1Q6ZUB1 1445 aa15.68■□□□□ 0.1
CRAMP1-203ENST00000415022 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
CRAMP1-203ENST00000415022 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
CRAMP1-203ENST00000415022 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
CRAMP1-203ENST00000415022 TOM1O60784 492 aa15.65■□□□□ 0.1
CRAMP1-203ENST00000415022 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
CRAMP1-203ENST00000415022 NPHP4O75161 1426 aaPredicted RBP15.65■□□□□ 0.1
CRAMP1-203ENST00000415022 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
CRAMP1-203ENST00000415022 SETD1AO15047 1707 aaKnown RBP15.64■□□□□ 0.09
CRAMP1-203ENST00000415022 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
CRAMP1-203ENST00000415022 CHGAP10645 457 aaKnown RBP15.63■□□□□ 0.09
CRAMP1-203ENST00000415022 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
CRAMP1-203ENST00000415022 ANKLE2Q86XL3 938 aa15.63■□□□□ 0.09
CRAMP1-203ENST00000415022 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
CRAMP1-203ENST00000415022 RGS17Q9UGC6 210 aaPredicted RBP15.62■□□□□ 0.09
CRAMP1-203ENST00000415022 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
CRAMP1-203ENST00000415022 ADAMTS13Q76LX8 1427 aa15.61■□□□□ 0.09
CRAMP1-203ENST00000415022 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
CRAMP1-203ENST00000415022 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
CRAMP1-203ENST00000415022 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
CRAMP1-203ENST00000415022 PLEKHG1Q9ULL1 1385 aa15.58■□□□□ 0.08
CRAMP1-203ENST00000415022 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.08
CRAMP1-203ENST00000415022 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
CRAMP1-203ENST00000415022 SLC26A8Q96RN1 970 aa15.56■□□□□ 0.08
CRAMP1-203ENST00000415022 PTPRUQ92729 1446 aa15.54■□□□□ 0.08
CRAMP1-203ENST00000415022 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
CRAMP1-203ENST00000415022 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
CRAMP1-203ENST00000415022 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
CRAMP1-203ENST00000415022 NWD1Q149M9 1564 aa15.53■□□□□ 0.08
CRAMP1-203ENST00000415022 ASXL1Q8IXJ9 1541 aa15.53■□□□□ 0.08
CRAMP1-203ENST00000415022 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
CRAMP1-203ENST00000415022 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
CRAMP1-203ENST00000415022 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.08
CRAMP1-203ENST00000415022 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
CRAMP1-203ENST00000415022 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
CRAMP1-203ENST00000415022 METP08581 1390 aa15.5■□□□□ 0.07
CRAMP1-203ENST00000415022 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
CRAMP1-203ENST00000415022 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
CRAMP1-203ENST00000415022 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 MYOM2P54296 1465 aa15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 PPP1R15AO75807 674 aaPredicted RBP15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 PIK3C2GO75747 1445 aa15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 CPS1P31327 1500 aa15.48■□□□□ 0.07
CRAMP1-203ENST00000415022 POTEAQ6S8J7 498 aa15.47■□□□□ 0.07
CRAMP1-203ENST00000415022 TBX22Q9Y458 520 aa15.46■□□□□ 0.07
CRAMP1-203ENST00000415022 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
CRAMP1-203ENST00000415022 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
CRAMP1-203ENST00000415022 VGFO15240 615 aaPredicted RBP15.42■□□□□ 0.06
CRAMP1-203ENST00000415022 KCNA6P17658 529 aa15.42■□□□□ 0.06
CRAMP1-203ENST00000415022 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
CRAMP1-203ENST00000415022 DCAF11Q8TEB1 546 aa15.41■□□□□ 0.06
CRAMP1-203ENST00000415022 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
CRAMP1-203ENST00000415022 BCANQ96GW7 911 aa15.41■□□□□ 0.06
CRAMP1-203ENST00000415022 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
CRAMP1-203ENST00000415022 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
CRAMP1-203ENST00000415022 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
CRAMP1-203ENST00000415022 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
CRAMP1-203ENST00000415022 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
CRAMP1-203ENST00000415022 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
CRAMP1-203ENST00000415022 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
CRAMP1-203ENST00000415022 LAMC1P11047 1609 aa15.39■□□□□ 0.05
CRAMP1-203ENST00000415022 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
CRAMP1-203ENST00000415022 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
CRAMP1-203ENST00000415022 TMEM94Q12767 1356 aa15.37■□□□□ 0.05
CRAMP1-203ENST00000415022 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
CRAMP1-203ENST00000415022 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.37■□□□□ 0.05
CRAMP1-203ENST00000415022 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
CRAMP1-203ENST00000415022 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
CRAMP1-203ENST00000415022 TRPM1Q7Z4N2 1603 aa15.36■□□□□ 0.05
CRAMP1-203ENST00000415022 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
CRAMP1-203ENST00000415022 NBPF8Q3BBV2 869 aa15.35■□□□□ 0.05
CRAMP1-203ENST00000415022 PLEKHH1Q9ULM0 1364 aa15.35■□□□□ 0.05
CRAMP1-203ENST00000415022 TECPR2O15040 1411 aa15.34■□□□□ 0.05
CRAMP1-203ENST00000415022 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
CRAMP1-203ENST00000415022 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
CRAMP1-203ENST00000415022 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
CRAMP1-203ENST00000415022 YTHDC2Q9H6S0 1430 aaKnown RBP15.33■□□□□ 0.04
CRAMP1-203ENST00000415022 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
CRAMP1-203ENST00000415022 LRPPRCP42704 1394 aaKnown RBP15.32■□□□□ 0.04
CRAMP1-203ENST00000415022 PTCH1Q13635 1447 aa15.32■□□□□ 0.04
CRAMP1-203ENST00000415022 ABCC11Q96J66 1382 aa15.29■□□□□ 0.04
CRAMP1-203ENST00000415022 WAPLQ7Z5K2 1190 aa15.29■□□□□ 0.04
CRAMP1-203ENST00000415022 STK26Q9P289 416 aa15.29■□□□□ 0.04
CRAMP1-203ENST00000415022 DLC1Q96QB1 1528 aa15.27■□□□□ 0.03
CRAMP1-203ENST00000415022 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
CRAMP1-203ENST00000415022 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
CRAMP1-203ENST00000415022 ROBO1Q9Y6N7 1651 aa15.25■□□□□ 0.03
CRAMP1-203ENST00000415022 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms