RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.54■■□□□ 1.84
PAX3-208ENST00000409828 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
PAX3-208ENST00000409828 RPGRIP1LQ68CZ1 1315 aa26.53■■□□□ 1.84
PAX3-208ENST00000409828 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
PAX3-208ENST00000409828 NCKAP5LQ9HCH0 1330 aa26.51■■□□□ 1.83
PAX3-208ENST00000409828 LTKP29376 864 aa26.51■■□□□ 1.83
PAX3-208ENST00000409828 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
PAX3-208ENST00000409828 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
PAX3-208ENST00000409828 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
PAX3-208ENST00000409828 ZNF326Q5BKZ1 582 aaKnown RBP26.47■■□□□ 1.83
PAX3-208ENST00000409828 PPLO60437 1756 aa26.47■■□□□ 1.83
PAX3-208ENST00000409828 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
PAX3-208ENST00000409828 PLEKHG1Q9ULL1 1385 aa26.45■■□□□ 1.82
PAX3-208ENST00000409828 VGFO15240 615 aaPredicted RBP26.42■■□□□ 1.82
PAX3-208ENST00000409828 STAC3Q96MF2 364 aa26.42■■□□□ 1.82
PAX3-208ENST00000409828 CLSPNQ9HAW4 1339 aa26.41■■□□□ 1.82
PAX3-208ENST00000409828 PPP1R15AO75807 674 aaPredicted RBP26.41■■□□□ 1.82
PAX3-208ENST00000409828 RGL3Q3MIN7 710 aa26.38■■□□□ 1.81
PAX3-208ENST00000409828 SETBP1Q9Y6X0 1596 aa26.37■■□□□ 1.81
PAX3-208ENST00000409828 DIP2AQ14689 1571 aa26.37■■□□□ 1.81
PAX3-208ENST00000409828 MYOM2P54296 1465 aa26.36■■□□□ 1.81
PAX3-208ENST00000409828 TBX22Q9Y458 520 aa26.33■■□□□ 1.81
PAX3-208ENST00000409828 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
PAX3-208ENST00000409828 ADAMTS13Q76LX8 1427 aa26.31■■□□□ 1.8
PAX3-208ENST00000409828 NRXN1Q9ULB1 1477 aa26.31■■□□□ 1.8
PAX3-208ENST00000409828 NUTM2DQ5VT03 806 aaPredicted RBP26.31■■□□□ 1.8
PAX3-208ENST00000409828 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
PAX3-208ENST00000409828 PIK3R4Q99570 1358 aa26.29■■□□□ 1.8
PAX3-208ENST00000409828 BCANQ96GW7 911 aa26.27■■□□□ 1.8
PAX3-208ENST00000409828 PIK3C2GO75747 1445 aa26.27■■□□□ 1.8
PAX3-208ENST00000409828 ADGRF5Q8IZF2 1346 aa26.26■■□□□ 1.79
PAX3-208ENST00000409828 DCAF11Q8TEB1 546 aa26.25■■□□□ 1.79
PAX3-208ENST00000409828 SLC26A8Q96RN1 970 aa26.25■■□□□ 1.79
PAX3-208ENST00000409828 CHD2O14647 1828 aaKnown RBP26.25■■□□□ 1.79
PAX3-208ENST00000409828 SETD1AO15047 1707 aaKnown RBP26.25■■□□□ 1.79
PAX3-208ENST00000409828 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
PAX3-208ENST00000409828 LAMC1P11047 1609 aa26.23■■□□□ 1.79
PAX3-208ENST00000409828 ALKQ9UM73 1620 aa26.23■■□□□ 1.79
PAX3-208ENST00000409828 LTBP4Q8N2S1 1624 aa26.22■■□□□ 1.79
PAX3-208ENST00000409828 NWD1Q149M9 1564 aa26.21■■□□□ 1.79
PAX3-208ENST00000409828 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
PAX3-208ENST00000409828 CPS1P31327 1500 aa26.2■■□□□ 1.79
PAX3-208ENST00000409828 L3MBTL2Q969R5 705 aa26.2■■□□□ 1.78
PAX3-208ENST00000409828 ZNF335Q9H4Z2 1342 aaPredicted RBP26.19■■□□□ 1.78
PAX3-208ENST00000409828 KCNA6P17658 529 aa26.19■■□□□ 1.78
PAX3-208ENST00000409828 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
PAX3-208ENST00000409828 C14orf93Q9H972 538 aaKnown RBP26.18■■□□□ 1.78
PAX3-208ENST00000409828 STRCP1A6NGW2 1772 aa26.18■■□□□ 1.78
PAX3-208ENST00000409828 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
PAX3-208ENST00000409828 KIAA1210Q9ULL0 1709 aa26.16■■□□□ 1.78
PAX3-208ENST00000409828 NKTRP30414 1462 aaKnown RBP26.16■■□□□ 1.78
PAX3-208ENST00000409828 KDM2AQ9Y2K7 1162 aa26.15■■□□□ 1.78
PAX3-208ENST00000409828 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.77
PAX3-208ENST00000409828 METP08581 1390 aa26.13■■□□□ 1.77
PAX3-208ENST00000409828 XRN1Q8IZH2 1706 aaKnown RBP26.13■■□□□ 1.77
PAX3-208ENST00000409828 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
PAX3-208ENST00000409828 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
PAX3-208ENST00000409828 PTPRUQ92729 1446 aa26.1■■□□□ 1.77
PAX3-208ENST00000409828 CFAP70Q5T0N1 1121 aa26.08■■□□□ 1.77
PAX3-208ENST00000409828 ASXL1Q8IXJ9 1541 aa26.08■■□□□ 1.77
PAX3-208ENST00000409828 AMOTL2Q9Y2J4 779 aa26.07■■□□□ 1.76
PAX3-208ENST00000409828 LRRC7Q96NW7 1537 aa26.06■■□□□ 1.76
PAX3-208ENST00000409828 ADGRB1O14514 1584 aa26.06■■□□□ 1.76
PAX3-208ENST00000409828 TECPR2O15040 1411 aa26.05■■□□□ 1.76
PAX3-208ENST00000409828 NCOA3Q9Y6Q9 1424 aa26.05■■□□□ 1.76
PAX3-208ENST00000409828 KNDC1Q76NI1 1749 aa26.05■■□□□ 1.76
PAX3-208ENST00000409828 LRPPRCP42704 1394 aaKnown RBP26.05■■□□□ 1.76
PAX3-208ENST00000409828 ABCC11Q96J66 1382 aa26.05■■□□□ 1.76
PAX3-208ENST00000409828 PTCH1Q13635 1447 aa26.05■■□□□ 1.76
PAX3-208ENST00000409828 CERKQ8TCT0 537 aa26.03■■□□□ 1.76
PAX3-208ENST00000409828 YTHDC2Q9H6S0 1430 aaKnown RBP26.02■■□□□ 1.76
PAX3-208ENST00000409828 TRPM1Q7Z4N2 1603 aa26.02■■□□□ 1.76
PAX3-208ENST00000409828 XIRP1Q702N8 1843 aaKnown RBP26.02■■□□□ 1.76
PAX3-208ENST00000409828 SIRT1Q96EB6 747 aa26.01■■□□□ 1.75
PAX3-208ENST00000409828 TMEM132EQ6IEE7 984 aa25.99■■□□□ 1.75
PAX3-208ENST00000409828 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
PAX3-208ENST00000409828 DLC1Q96QB1 1528 aa25.98■■□□□ 1.75
PAX3-208ENST00000409828 TMEM94Q12767 1356 aa25.97■■□□□ 1.75
PAX3-208ENST00000409828 FAM135BQ49AJ0 1406 aa25.96■■□□□ 1.75
PAX3-208ENST00000409828 NBPF8Q3BBV2 869 aa25.95■■□□□ 1.74
PAX3-208ENST00000409828 GPRASP1Q5JY77 1395 aa25.94■■□□□ 1.74
PAX3-208ENST00000409828 ROBO2Q9HCK4 1378 aa25.94■■□□□ 1.74
PAX3-208ENST00000409828 RALGAPBQ86X10 1494 aa25.92■■□□□ 1.74
PAX3-208ENST00000409828 NBPF1Q3BBV0 1214 aa25.91■■□□□ 1.74
PAX3-208ENST00000409828 STK26Q9P289 416 aa25.9■■□□□ 1.74
PAX3-208ENST00000409828 ROCK2O75116 1388 aaKnown RBP25.88■■□□□ 1.73
PAX3-208ENST00000409828 ARHGEF28Q8N1W1 1705 aaKnown RBP25.88■■□□□ 1.73
PAX3-208ENST00000409828 MSH6P52701 1360 aa25.87■■□□□ 1.73
PAX3-208ENST00000409828 C19orf44Q9H6X5 657 aa25.87■■□□□ 1.73
PAX3-208ENST00000409828 DCCP43146 1447 aa25.87■■□□□ 1.73
PAX3-208ENST00000409828 ADGRL3Q9HAR2 1447 aa25.87■■□□□ 1.73
PAX3-208ENST00000409828 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
PAX3-208ENST00000409828 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.84■■□□□ 1.73
PAX3-208ENST00000409828 TRAK1Q9UPV9 953 aa25.84■■□□□ 1.73
PAX3-208ENST00000409828 WAPLQ7Z5K2 1190 aa25.81■■□□□ 1.72
PAX3-208ENST00000409828 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
PAX3-208ENST00000409828 RBM33Q96EV2 1170 aaKnown RBP25.81■■□□□ 1.72
PAX3-208ENST00000409828 TOM1O60784 492 aa25.8■■□□□ 1.72
PAX3-208ENST00000409828 CADPS2Q86UW7 1296 aa25.8■■□□□ 1.72
PAX3-208ENST00000409828 PRAM1Q96QH2 718 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms