RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
PAX3-208ENST00000409828 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
PAX3-208ENST00000409828 ABCC9O60706 1549 aa37.27■■■■□ 3.56
PAX3-208ENST00000409828 ZCCHC6Q5VYS8 1495 aaKnown RBP36.36■■■■□ 3.41
PAX3-208ENST00000409828 NACADO15069 1562 aa36.23■■■■□ 3.39
PAX3-208ENST00000409828 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
PAX3-208ENST00000409828 DCAF1Q9Y4B6 1507 aa36.17■■■■□ 3.38
PAX3-208ENST00000409828 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
PAX3-208ENST00000409828 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
PAX3-208ENST00000409828 UNC13AQ9UPW8 1703 aa35.33■■■■□ 3.25
PAX3-208ENST00000409828 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
PAX3-208ENST00000409828 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
PAX3-208ENST00000409828 PABPN1Q86U42 306 aaKnown RBP eCLIP34.84■■■■□ 3.17
PAX3-208ENST00000409828 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
PAX3-208ENST00000409828 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
PAX3-208ENST00000409828 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
PAX3-208ENST00000409828 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
PAX3-208ENST00000409828 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
PAX3-208ENST00000409828 BAZ1AQ9NRL2 1556 aaPredicted RBP33.76■■■□□ 2.99
PAX3-208ENST00000409828 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
PAX3-208ENST00000409828 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.95
PAX3-208ENST00000409828 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
PAX3-208ENST00000409828 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
PAX3-208ENST00000409828 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
PAX3-208ENST00000409828 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
PAX3-208ENST00000409828 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
PAX3-208ENST00000409828 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
PAX3-208ENST00000409828 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
PAX3-208ENST00000409828 WIZO95785 1651 aa33.16■■■□□ 2.9
PAX3-208ENST00000409828 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
PAX3-208ENST00000409828 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
PAX3-208ENST00000409828 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
PAX3-208ENST00000409828 CCDC88BA6NC98 1476 aa32.46■■■□□ 2.79
PAX3-208ENST00000409828 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
PAX3-208ENST00000409828 NESP48681 1621 aa32.36■■■□□ 2.77
PAX3-208ENST00000409828 CFTRP13569 1480 aa32.32■■■□□ 2.76
PAX3-208ENST00000409828 PDS5BQ9NTI5 1447 aa32.22■■■□□ 2.75
PAX3-208ENST00000409828 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
PAX3-208ENST00000409828 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
PAX3-208ENST00000409828 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
PAX3-208ENST00000409828 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
PAX3-208ENST00000409828 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
PAX3-208ENST00000409828 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
PAX3-208ENST00000409828 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
PAX3-208ENST00000409828 CUX2O14529 1486 aa31.77■■■□□ 2.68
PAX3-208ENST00000409828 WDR62O43379 1518 aa31.75■■■□□ 2.67
PAX3-208ENST00000409828 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
PAX3-208ENST00000409828 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
PAX3-208ENST00000409828 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.64
PAX3-208ENST00000409828 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
PAX3-208ENST00000409828 CUX1P39880 1505 aa31.42■■■□□ 2.62
PAX3-208ENST00000409828 WRNQ14191 1432 aaPredicted RBP eCLIP31.37■■■□□ 2.61
PAX3-208ENST00000409828 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
PAX3-208ENST00000409828 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
PAX3-208ENST00000409828 POLA1P09884 1462 aaPredicted RBP31.3■■■□□ 2.6
PAX3-208ENST00000409828 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
PAX3-208ENST00000409828 FGD5Q6ZNL6 1462 aa31.26■■■□□ 2.59
PAX3-208ENST00000409828 SYNJ1O43426 1573 aa31.25■■■□□ 2.59
PAX3-208ENST00000409828 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
PAX3-208ENST00000409828 SOGA1O94964 1423 aa31.17■■■□□ 2.58
PAX3-208ENST00000409828 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
PAX3-208ENST00000409828 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
PAX3-208ENST00000409828 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
PAX3-208ENST00000409828 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
PAX3-208ENST00000409828 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
PAX3-208ENST00000409828 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.54
PAX3-208ENST00000409828 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
PAX3-208ENST00000409828 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
PAX3-208ENST00000409828 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
PAX3-208ENST00000409828 TRIM41Q8WV44 630 aa30.82■■■□□ 2.52
PAX3-208ENST00000409828 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
PAX3-208ENST00000409828 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
PAX3-208ENST00000409828 MAGI1Q96QZ7 1491 aaPredicted RBP30.71■■■□□ 2.51
PAX3-208ENST00000409828 KIF27Q86VH2 1401 aa30.71■■■□□ 2.51
PAX3-208ENST00000409828 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
PAX3-208ENST00000409828 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
PAX3-208ENST00000409828 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
PAX3-208ENST00000409828 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
PAX3-208ENST00000409828 ADAMTS12P58397 1594 aa30.53■■■□□ 2.48
PAX3-208ENST00000409828 CHD1O14646 1710 aa30.53■■■□□ 2.48
PAX3-208ENST00000409828 IGF1RP08069 1367 aa30.52■■■□□ 2.48
PAX3-208ENST00000409828 FHAD1B1AJZ9 1412 aa30.51■■■□□ 2.47
PAX3-208ENST00000409828 CUL7Q14999 1698 aa30.49■■■□□ 2.47
PAX3-208ENST00000409828 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
PAX3-208ENST00000409828 CHMP7Q8WUX9 453 aaPredicted RBP30.46■■■□□ 2.47
PAX3-208ENST00000409828 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
PAX3-208ENST00000409828 EEA1Q15075 1411 aa30.41■■■□□ 2.46
PAX3-208ENST00000409828 FBLN2P98095 1184 aa30.4■■■□□ 2.46
PAX3-208ENST00000409828 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
PAX3-208ENST00000409828 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
PAX3-208ENST00000409828 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
PAX3-208ENST00000409828 NUP160Q12769 1436 aa30.27■■■□□ 2.44
PAX3-208ENST00000409828 CLASP1Q7Z460 1538 aa30.23■■■□□ 2.43
PAX3-208ENST00000409828 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
PAX3-208ENST00000409828 PRXQ9BXM0 1461 aa30.22■■■□□ 2.43
PAX3-208ENST00000409828 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
PAX3-208ENST00000409828 CEP170Q5SW79 1584 aa30.2■■■□□ 2.42
PAX3-208ENST00000409828 KIAA0586Q9BVV6 1533 aa30.07■■■□□ 2.4
PAX3-208ENST00000409828 KIF21BO75037 1637 aa30.04■■■□□ 2.4
PAX3-208ENST00000409828 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms