RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 KIF1BO60333 1816 aa28.24■■■□□ 2.11
PPM1B-207ENST00000409486 MED14O60244 1454 aa28.23■■■□□ 2.11
PPM1B-207ENST00000409486 CERKQ8TCT0 537 aa28.2■■■□□ 2.1
PPM1B-207ENST00000409486 SLC26A8Q96RN1 970 aa28.19■■■□□ 2.1
PPM1B-207ENST00000409486 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
PPM1B-207ENST00000409486 ACIN1Q9UKV3 1341 aaKnown RBP28.16■■■□□ 2.1
PPM1B-207ENST00000409486 CCDC144AA2RUR9 1427 aa28.16■■■□□ 2.1
PPM1B-207ENST00000409486 LTBP4Q8N2S1 1624 aa28.16■■■□□ 2.1
PPM1B-207ENST00000409486 HDGFP51858 240 aaKnown RBP28.15■■■□□ 2.1
PPM1B-207ENST00000409486 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
PPM1B-207ENST00000409486 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.13■■■□□ 2.09
PPM1B-207ENST00000409486 RGL3Q3MIN7 710 aa28.12■■■□□ 2.09
PPM1B-207ENST00000409486 STRCP1A6NGW2 1772 aa28.09■■■□□ 2.09
PPM1B-207ENST00000409486 PLEKHG1Q9ULL1 1385 aa28.08■■■□□ 2.09
PPM1B-207ENST00000409486 HRCP23327 699 aa28.07■■■□□ 2.08
PPM1B-207ENST00000409486 NEXMIFQ5QGS0 1516 aa28.06■■■□□ 2.08
PPM1B-207ENST00000409486 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
PPM1B-207ENST00000409486 CPS1P31327 1500 aa28■■■□□ 2.07
PPM1B-207ENST00000409486 PPLO60437 1756 aa27.99■■■□□ 2.07
PPM1B-207ENST00000409486 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
PPM1B-207ENST00000409486 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
PPM1B-207ENST00000409486 ANKRD30BQ9BXX2 1392 aa27.97■■■□□ 2.07
PPM1B-207ENST00000409486 ADAMTS13Q76LX8 1427 aa27.96■■■□□ 2.07
PPM1B-207ENST00000409486 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
PPM1B-207ENST00000409486 SPATA31E1Q6ZUB1 1445 aa27.94■■■□□ 2.06
PPM1B-207ENST00000409486 VGFO15240 615 aaPredicted RBP27.93■■■□□ 2.06
PPM1B-207ENST00000409486 RPGRIP1LQ68CZ1 1315 aa27.92■■■□□ 2.06
PPM1B-207ENST00000409486 UBAP1LF5GYI3 381 aa27.92■■■□□ 2.06
PPM1B-207ENST00000409486 KCNA6P17658 529 aa27.92■■■□□ 2.06
PPM1B-207ENST00000409486 LRRC7Q96NW7 1537 aa27.92■■■□□ 2.06
PPM1B-207ENST00000409486 DIP2AQ14689 1571 aa27.91■■■□□ 2.06
PPM1B-207ENST00000409486 PROSER2Q86WR7 435 aaPredicted RBP27.91■■■□□ 2.06
PPM1B-207ENST00000409486 TBX22Q9Y458 520 aa27.91■■■□□ 2.06
PPM1B-207ENST00000409486 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
PPM1B-207ENST00000409486 SETBP1Q9Y6X0 1596 aa27.91■■■□□ 2.06
PPM1B-207ENST00000409486 IFT172Q9UG01 1749 aa27.9■■■□□ 2.06
PPM1B-207ENST00000409486 CHD2O14647 1828 aaKnown RBP27.9■■■□□ 2.06
PPM1B-207ENST00000409486 PCGF6Q9BYE7 350 aa27.89■■■□□ 2.06
PPM1B-207ENST00000409486 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.06
PPM1B-207ENST00000409486 KDM2AQ9Y2K7 1162 aa27.87■■■□□ 2.05
PPM1B-207ENST00000409486 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
PPM1B-207ENST00000409486 IQSEC2Q5JU85 1478 aa27.86■■■□□ 2.05
PPM1B-207ENST00000409486 METP08581 1390 aa27.85■■■□□ 2.05
PPM1B-207ENST00000409486 XIRP1Q702N8 1843 aaKnown RBP27.85■■■□□ 2.05
PPM1B-207ENST00000409486 PIP4K2BP78356 416 aa27.85■■■□□ 2.05
PPM1B-207ENST00000409486 TMEM94Q12767 1356 aa27.84■■■□□ 2.05
PPM1B-207ENST00000409486 C14orf37Q86TY3 774 aa27.83■■■□□ 2.05
PPM1B-207ENST00000409486 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
PPM1B-207ENST00000409486 PTPRUQ92729 1446 aa27.83■■■□□ 2.05
PPM1B-207ENST00000409486 ALKQ9UM73 1620 aa27.82■■■□□ 2.04
PPM1B-207ENST00000409486 NKTRP30414 1462 aaKnown RBP27.8■■■□□ 2.04
PPM1B-207ENST00000409486 NEUROD1Q13562 356 aa27.8■■■□□ 2.04
PPM1B-207ENST00000409486 DCAF11Q8TEB1 546 aa27.8■■■□□ 2.04
PPM1B-207ENST00000409486 DHX57Q6P158 1386 aaKnown RBP27.8■■■□□ 2.04
PPM1B-207ENST00000409486 SIN3AQ96ST3 1273 aa27.78■■■□□ 2.04
PPM1B-207ENST00000409486 SETD1AO15047 1707 aaKnown RBP27.78■■■□□ 2.04
PPM1B-207ENST00000409486 PIK3R4Q99570 1358 aa27.76■■■□□ 2.03
PPM1B-207ENST00000409486 TOM1O60784 492 aa27.76■■■□□ 2.03
PPM1B-207ENST00000409486 STK26Q9P289 416 aa27.75■■■□□ 2.03
PPM1B-207ENST00000409486 XRN1Q8IZH2 1706 aaKnown RBP27.74■■■□□ 2.03
PPM1B-207ENST00000409486 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
PPM1B-207ENST00000409486 PIK3C2GO75747 1445 aa27.72■■■□□ 2.03
PPM1B-207ENST00000409486 MYOM2P54296 1465 aa27.71■■■□□ 2.03
PPM1B-207ENST00000409486 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.03
PPM1B-207ENST00000409486 MSH6P52701 1360 aa27.7■■■□□ 2.03
PPM1B-207ENST00000409486 ASXL1Q8IXJ9 1541 aa27.65■■■□□ 2.02
PPM1B-207ENST00000409486 NRXN1Q9ULB1 1477 aa27.63■■■□□ 2.01
PPM1B-207ENST00000409486 ROBO2Q9HCK4 1378 aa27.63■■■□□ 2.01
PPM1B-207ENST00000409486 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.62■■■□□ 2.01
PPM1B-207ENST00000409486 LAMC1P11047 1609 aa27.62■■■□□ 2.01
PPM1B-207ENST00000409486 C14orf93Q9H972 538 aaKnown RBP27.61■■■□□ 2.01
PPM1B-207ENST00000409486 ATF3P18847 181 aa27.59■■■□□ 2.01
PPM1B-207ENST00000409486 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
PPM1B-207ENST00000409486 L3MBTL2Q969R5 705 aa27.58■■■□□ 2.01
PPM1B-207ENST00000409486 YTHDC2Q9H6S0 1430 aaKnown RBP27.57■■■□□ 2
PPM1B-207ENST00000409486 WAPLQ7Z5K2 1190 aa27.57■■■□□ 2
PPM1B-207ENST00000409486 C19orf44Q9H6X5 657 aa27.56■■■□□ 2
PPM1B-207ENST00000409486 LRPPRCP42704 1394 aaKnown RBP27.56■■■□□ 2
PPM1B-207ENST00000409486 PTCH1Q13635 1447 aa27.56■■■□□ 2
PPM1B-207ENST00000409486 HSPA1LP34931 641 aa27.55■■■□□ 2
PPM1B-207ENST00000409486 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
PPM1B-207ENST00000409486 ROBO1Q9Y6N7 1651 aa27.53■■■□□ 2
PPM1B-207ENST00000409486 NCOA3Q9Y6Q9 1424 aa27.53■■■□□ 2
PPM1B-207ENST00000409486 PLEKHH1Q9ULM0 1364 aa27.52■■■□□ 2
PPM1B-207ENST00000409486 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
PPM1B-207ENST00000409486 SLAIN2Q9P270 581 aa27.52■■■□□ 2
PPM1B-207ENST00000409486 TRAK1Q9UPV9 953 aa27.52■■■□□ 2
PPM1B-207ENST00000409486 ADGRL3Q9HAR2 1447 aa27.51■■□□□ 1.99
PPM1B-207ENST00000409486 CADPS2Q86UW7 1296 aa27.51■■□□□ 1.99
PPM1B-207ENST00000409486 TONSLQ96HA7 1378 aa27.49■■□□□ 1.99
PPM1B-207ENST00000409486 PRAG1Q86YV5 1406 aa27.48■■□□□ 1.99
PPM1B-207ENST00000409486 STAC3Q96MF2 364 aa27.48■■□□□ 1.99
PPM1B-207ENST00000409486 ADGRB1O14514 1584 aa27.47■■□□□ 1.99
PPM1B-207ENST00000409486 POGKQ9P215 609 aa27.47■■□□□ 1.99
PPM1B-207ENST00000409486 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
PPM1B-207ENST00000409486 PRAM1Q96QH2 718 aa27.46■■□□□ 1.99
PPM1B-207ENST00000409486 NUTM2FA1L443 756 aa27.45■■□□□ 1.99
PPM1B-207ENST00000409486 TECPR2O15040 1411 aa27.45■■□□□ 1.98
PPM1B-207ENST00000409486 NBPF1Q3BBV0 1214 aa27.44■■□□□ 1.98
PPM1B-207ENST00000409486 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms