RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
PPM1B-207ENST00000409486 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
PPM1B-207ENST00000409486 ABCC9O60706 1549 aa40.22■■■■■ 4.03
PPM1B-207ENST00000409486 DCAF8L2P0C7V8 631 aa38.83■■■■□ 3.81
PPM1B-207ENST00000409486 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
PPM1B-207ENST00000409486 NACADO15069 1562 aa38.44■■■■□ 3.74
PPM1B-207ENST00000409486 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.74
PPM1B-207ENST00000409486 MYO15BQ96JP2 1530 aa38.04■■■■□ 3.68
PPM1B-207ENST00000409486 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
PPM1B-207ENST00000409486 UNC13AQ9UPW8 1703 aa37.78■■■■□ 3.64
PPM1B-207ENST00000409486 PABPN1Q86U42 306 aaKnown RBP eCLIP37.64■■■■□ 3.62
PPM1B-207ENST00000409486 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
PPM1B-207ENST00000409486 BICRAQ9NZM4 1560 aa37.37■■■■□ 3.57
PPM1B-207ENST00000409486 DNAJC5BQ9UF47 199 aa36.8■■■■□ 3.48
PPM1B-207ENST00000409486 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
PPM1B-207ENST00000409486 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
PPM1B-207ENST00000409486 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
PPM1B-207ENST00000409486 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
PPM1B-207ENST00000409486 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
PPM1B-207ENST00000409486 BAZ1AQ9NRL2 1556 aaPredicted RBP35.72■■■■□ 3.31
PPM1B-207ENST00000409486 MROH2BQ7Z745 1585 aa35.6■■■■□ 3.29
PPM1B-207ENST00000409486 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
PPM1B-207ENST00000409486 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
PPM1B-207ENST00000409486 NCAPD3P42695 1498 aa35.42■■■■□ 3.26
PPM1B-207ENST00000409486 BAZ1BQ9UIG0 1483 aaKnown RBP35.34■■■■□ 3.25
PPM1B-207ENST00000409486 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
PPM1B-207ENST00000409486 WIZO95785 1651 aa35.29■■■■□ 3.24
PPM1B-207ENST00000409486 PEG3Q9GZU2 1588 aa35.28■■■■□ 3.24
PPM1B-207ENST00000409486 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
PPM1B-207ENST00000409486 NESP48681 1621 aa34.81■■■■□ 3.16
PPM1B-207ENST00000409486 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
PPM1B-207ENST00000409486 ERCC6Q03468 1493 aa34.66■■■■□ 3.14
PPM1B-207ENST00000409486 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
PPM1B-207ENST00000409486 LAMC3Q9Y6N6 1575 aa34.55■■■■□ 3.12
PPM1B-207ENST00000409486 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
PPM1B-207ENST00000409486 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
PPM1B-207ENST00000409486 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
PPM1B-207ENST00000409486 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
PPM1B-207ENST00000409486 CFTRP13569 1480 aa34.24■■■■□ 3.07
PPM1B-207ENST00000409486 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
PPM1B-207ENST00000409486 FANCD2Q9BXW9 1451 aa34.15■■■■□ 3.06
PPM1B-207ENST00000409486 CEP164Q9UPV0 1460 aa34.12■■■■□ 3.05
PPM1B-207ENST00000409486 PRDM2Q13029 1718 aa34.1■■■■□ 3.05
PPM1B-207ENST00000409486 CUX2O14529 1486 aa34.07■■■■□ 3.04
PPM1B-207ENST00000409486 MRC2Q9UBG0 1479 aa34.03■■■■□ 3.04
PPM1B-207ENST00000409486 WDR62O43379 1518 aa33.87■■■■□ 3.01
PPM1B-207ENST00000409486 URB2Q14146 1524 aaKnown RBP33.82■■■■□ 3
PPM1B-207ENST00000409486 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
PPM1B-207ENST00000409486 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
PPM1B-207ENST00000409486 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
PPM1B-207ENST00000409486 CUX1P39880 1505 aa33.4■■■□□ 2.94
PPM1B-207ENST00000409486 IFT140Q96RY7 1462 aa33.33■■■□□ 2.93
PPM1B-207ENST00000409486 POLA1P09884 1462 aaPredicted RBP33.32■■■□□ 2.92
PPM1B-207ENST00000409486 FGD5Q6ZNL6 1462 aa33.29■■■□□ 2.92
PPM1B-207ENST00000409486 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
PPM1B-207ENST00000409486 RAD54L2Q9Y4B4 1467 aa33.27■■■□□ 2.92
PPM1B-207ENST00000409486 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
PPM1B-207ENST00000409486 SOGA1O94964 1423 aa33.2■■■□□ 2.91
PPM1B-207ENST00000409486 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
PPM1B-207ENST00000409486 SYNJ1O43426 1573 aa33.15■■■□□ 2.9
PPM1B-207ENST00000409486 EIF4G3O43432 1585 aaKnown RBP33.15■■■□□ 2.9
PPM1B-207ENST00000409486 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
PPM1B-207ENST00000409486 TDRD9Q8NDG6 1382 aaKnown RBP33.07■■■□□ 2.88
PPM1B-207ENST00000409486 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
PPM1B-207ENST00000409486 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
PPM1B-207ENST00000409486 DNAJC5Q9H3Z4 198 aa33.01■■■□□ 2.88
PPM1B-207ENST00000409486 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
PPM1B-207ENST00000409486 ABCA10Q8WWZ4 1543 aa32.86■■■□□ 2.85
PPM1B-207ENST00000409486 FBLN2P98095 1184 aa32.86■■■□□ 2.85
PPM1B-207ENST00000409486 PBRM1Q86U86 1689 aa32.83■■■□□ 2.85
PPM1B-207ENST00000409486 GAPVD1Q14C86 1478 aa32.81■■■□□ 2.84
PPM1B-207ENST00000409486 SNAPC4Q5SXM2 1469 aa32.81■■■□□ 2.84
PPM1B-207ENST00000409486 CHD1O14646 1710 aa32.79■■■□□ 2.84
PPM1B-207ENST00000409486 ABCA5Q8WWZ7 1642 aa32.78■■■□□ 2.84
PPM1B-207ENST00000409486 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
PPM1B-207ENST00000409486 OSCARQ8IYS5 282 aa32.76■■■□□ 2.84
PPM1B-207ENST00000409486 CHMP7Q8WUX9 453 aaPredicted RBP32.64■■■□□ 2.82
PPM1B-207ENST00000409486 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
PPM1B-207ENST00000409486 SYNJ2O15056 1496 aa32.54■■■□□ 2.8
PPM1B-207ENST00000409486 TRIM41Q8WV44 630 aa32.54■■■□□ 2.8
PPM1B-207ENST00000409486 ADAMTS12P58397 1594 aa32.5■■■□□ 2.79
PPM1B-207ENST00000409486 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
PPM1B-207ENST00000409486 KIF27Q86VH2 1401 aa32.46■■■□□ 2.79
PPM1B-207ENST00000409486 FHAD1B1AJZ9 1412 aa32.39■■■□□ 2.78
PPM1B-207ENST00000409486 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
PPM1B-207ENST00000409486 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
PPM1B-207ENST00000409486 RIMBP3CA6NJZ7 1639 aa32.3■■■□□ 2.76
PPM1B-207ENST00000409486 RIMBP3BA6NNM3 1639 aa32.3■■■□□ 2.76
PPM1B-207ENST00000409486 RIMBP3Q9UFD9 1639 aa32.3■■■□□ 2.76
PPM1B-207ENST00000409486 IGF1RP08069 1367 aa32.29■■■□□ 2.76
PPM1B-207ENST00000409486 CLASP1Q7Z460 1538 aa32.28■■■□□ 2.76
PPM1B-207ENST00000409486 ARHGEF11O15085 1522 aa32.25■■■□□ 2.75
PPM1B-207ENST00000409486 CEP170Q5SW79 1584 aa32.25■■■□□ 2.75
PPM1B-207ENST00000409486 CUL7Q14999 1698 aa32.24■■■□□ 2.75
PPM1B-207ENST00000409486 CARMIL1Q5VZK9 1371 aa32.16■■■□□ 2.74
PPM1B-207ENST00000409486 NUP160Q12769 1436 aa32.14■■■□□ 2.74
PPM1B-207ENST00000409486 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
PPM1B-207ENST00000409486 CYB5RLQ6IPT4 315 aa32.05■■■□□ 2.72
PPM1B-207ENST00000409486 FAM9AQ8IZU1 332 aaPredicted RBP32.05■■■□□ 2.72
PPM1B-207ENST00000409486 ARAP1Q96P48 1450 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms