RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-205ENST00000409455 UHRF1BP1Q6BDS2 1440 aa20.46■□□□□ 0.87
LIMS2-205ENST00000409455 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
LIMS2-205ENST00000409455 ABCA6Q8N139 1617 aa20.45■□□□□ 0.86
LIMS2-205ENST00000409455 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
LIMS2-205ENST00000409455 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
LIMS2-205ENST00000409455 RICTORQ6R327 1708 aa20.45■□□□□ 0.86
LIMS2-205ENST00000409455 RCAN3Q9UKA8 241 aa20.44■□□□□ 0.86
LIMS2-205ENST00000409455 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
LIMS2-205ENST00000409455 PTPRTO14522 1441 aa20.43■□□□□ 0.86
LIMS2-205ENST00000409455 TET3O43151 1660 aa20.43■□□□□ 0.86
LIMS2-205ENST00000409455 BRD4O60885 1362 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-205ENST00000409455 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
LIMS2-205ENST00000409455 PPRC1Q5VV67 1664 aaKnown RBP20.41■□□□□ 0.86
LIMS2-205ENST00000409455 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
LIMS2-205ENST00000409455 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
LIMS2-205ENST00000409455 DIP2CQ9Y2E4 1556 aa20.4■□□□□ 0.86
LIMS2-205ENST00000409455 RNF17Q9BXT8 1623 aaKnown RBP20.38■□□□□ 0.85
LIMS2-205ENST00000409455 TRPM2O94759 1503 aa20.38■□□□□ 0.85
LIMS2-205ENST00000409455 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
LIMS2-205ENST00000409455 RALBP1Q15311 655 aa20.37■□□□□ 0.85
LIMS2-205ENST00000409455 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
LIMS2-205ENST00000409455 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
LIMS2-205ENST00000409455 LMTK2Q8IWU2 1503 aa20.36■□□□□ 0.85
LIMS2-205ENST00000409455 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
LIMS2-205ENST00000409455 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
LIMS2-205ENST00000409455 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
LIMS2-205ENST00000409455 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
LIMS2-205ENST00000409455 GSE1Q14687 1217 aa20.33■□□□□ 0.84
LIMS2-205ENST00000409455 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
LIMS2-205ENST00000409455 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-205ENST00000409455 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
LIMS2-205ENST00000409455 ZMYM4Q5VZL5 1548 aa20.32■□□□□ 0.84
LIMS2-205ENST00000409455 CEP152O94986 1710 aa20.32■□□□□ 0.84
LIMS2-205ENST00000409455 COL17A1Q9UMD9 1497 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-205ENST00000409455 NPATQ14207 1427 aa20.31■□□□□ 0.84
LIMS2-205ENST00000409455 UGGT1Q9NYU2 1555 aa20.3■□□□□ 0.84
LIMS2-205ENST00000409455 ABCC3O15438 1527 aa20.29■□□□□ 0.84
LIMS2-205ENST00000409455 BRPF3Q9ULD4 1205 aa20.28■□□□□ 0.84
LIMS2-205ENST00000409455 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
LIMS2-205ENST00000409455 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
LIMS2-205ENST00000409455 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
LIMS2-205ENST00000409455 NFKBIBQ15653 356 aa20.26■□□□□ 0.83
LIMS2-205ENST00000409455 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
LIMS2-205ENST00000409455 CFAP65Q6ZU64 1925 aaKnown RBP20.24■□□□□ 0.83
LIMS2-205ENST00000409455 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
LIMS2-205ENST00000409455 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
LIMS2-205ENST00000409455 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
LIMS2-205ENST00000409455 PLIN1O60240 522 aa20.21■□□□□ 0.83
LIMS2-205ENST00000409455 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
LIMS2-205ENST00000409455 CRBNQ96SW2 442 aa20.2■□□□□ 0.82
LIMS2-205ENST00000409455 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
LIMS2-205ENST00000409455 CAMSAP1Q5T5Y3 1602 aa20.19■□□□□ 0.82
LIMS2-205ENST00000409455 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-205ENST00000409455 NOS1P29475 1434 aa20.18■□□□□ 0.82
LIMS2-205ENST00000409455 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
LIMS2-205ENST00000409455 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
LIMS2-205ENST00000409455 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
LIMS2-205ENST00000409455 MLECQ14165 292 aa20.16■□□□□ 0.82
LIMS2-205ENST00000409455 UBE2Q2Q8WVN8 375 aa20.16■□□□□ 0.82
LIMS2-205ENST00000409455 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
LIMS2-205ENST00000409455 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 KIF1BO60333 1816 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 INSRP06213 1382 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 REREQ9P2R6 1566 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 AGLP35573 1532 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
LIMS2-205ENST00000409455 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.82
LIMS2-205ENST00000409455 IDI1Q13907 227 aa20.14■□□□□ 0.81
LIMS2-205ENST00000409455 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
LIMS2-205ENST00000409455 FBXO31Q5XUX0 539 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-205ENST00000409455 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
LIMS2-205ENST00000409455 BLMP54132 1417 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-205ENST00000409455 CENPQQ7L2Z9 268 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-205ENST00000409455 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
LIMS2-205ENST00000409455 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
LIMS2-205ENST00000409455 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
LIMS2-205ENST00000409455 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
LIMS2-205ENST00000409455 MROH2AA6NES4 1674 aa20.11■□□□□ 0.81
LIMS2-205ENST00000409455 SYNMO15061 1565 aa20.11■□□□□ 0.81
LIMS2-205ENST00000409455 TESK2Q96S53 571 aa20.11■□□□□ 0.81
LIMS2-205ENST00000409455 LAMC1P11047 1609 aa20.1■□□□□ 0.81
LIMS2-205ENST00000409455 EIF5BO60841 1220 aaKnown RBP20.1■□□□□ 0.81
LIMS2-205ENST00000409455 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
LIMS2-205ENST00000409455 ARHGEF40Q8TER5 1519 aa20.1■□□□□ 0.81
LIMS2-205ENST00000409455 MYOM2P54296 1465 aa20.1■□□□□ 0.81
LIMS2-205ENST00000409455 RPGRIP1LQ68CZ1 1315 aa20.07■□□□□ 0.8
LIMS2-205ENST00000409455 C8orf34Q49A92 452 aa20.06■□□□□ 0.8
LIMS2-205ENST00000409455 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
LIMS2-205ENST00000409455 PER1O15534 1290 aaPredicted RBP20.06■□□□□ 0.8
LIMS2-205ENST00000409455 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
LIMS2-205ENST00000409455 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
LIMS2-205ENST00000409455 NRXN1Q9ULB1 1477 aa20.04■□□□□ 0.8
LIMS2-205ENST00000409455 FRAT2O75474 233 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-205ENST00000409455 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
LIMS2-205ENST00000409455 IFT172Q9UG01 1749 aa20.04■□□□□ 0.8
LIMS2-205ENST00000409455 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
LIMS2-205ENST00000409455 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
LIMS2-205ENST00000409455 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms