RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 BCANQ96GW7 911 aa26.66■■□□□ 1.86
PDLIM2-206ENST00000409141 MYO5BQ9ULV0 1848 aa26.65■■□□□ 1.86
PDLIM2-206ENST00000409141 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.65■■□□□ 1.86
PDLIM2-206ENST00000409141 ZFYVE9O95405 1425 aa26.64■■□□□ 1.86
PDLIM2-206ENST00000409141 TRPM2O94759 1503 aa26.63■■□□□ 1.85
PDLIM2-206ENST00000409141 ZNF326Q5BKZ1 582 aaKnown RBP26.62■■□□□ 1.85
PDLIM2-206ENST00000409141 NUTM2DQ5VT03 806 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-206ENST00000409141 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
PDLIM2-206ENST00000409141 SLC26A8Q96RN1 970 aa26.62■■□□□ 1.85
PDLIM2-206ENST00000409141 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
PDLIM2-206ENST00000409141 PLEKHG1Q9ULL1 1385 aa26.58■■□□□ 1.85
PDLIM2-206ENST00000409141 CPS1P31327 1500 aa26.57■■□□□ 1.84
PDLIM2-206ENST00000409141 IQSEC2Q5JU85 1478 aa26.57■■□□□ 1.84
PDLIM2-206ENST00000409141 HRCP23327 699 aa26.55■■□□□ 1.84
PDLIM2-206ENST00000409141 KIF1BO60333 1816 aa26.51■■□□□ 1.83
PDLIM2-206ENST00000409141 CCDC144AA2RUR9 1427 aa26.5■■□□□ 1.83
PDLIM2-206ENST00000409141 KCNA6P17658 529 aa26.49■■□□□ 1.83
PDLIM2-206ENST00000409141 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
PDLIM2-206ENST00000409141 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
PDLIM2-206ENST00000409141 UBAP1LF5GYI3 381 aa26.48■■□□□ 1.83
PDLIM2-206ENST00000409141 LRRC7Q96NW7 1537 aa26.45■■□□□ 1.82
PDLIM2-206ENST00000409141 RPGRIP1LQ68CZ1 1315 aa26.44■■□□□ 1.82
PDLIM2-206ENST00000409141 ADAMTS13Q76LX8 1427 aa26.44■■□□□ 1.82
PDLIM2-206ENST00000409141 VGFO15240 615 aaPredicted RBP26.42■■□□□ 1.82
PDLIM2-206ENST00000409141 NEXMIFQ5QGS0 1516 aa26.42■■□□□ 1.82
PDLIM2-206ENST00000409141 RGL3Q3MIN7 710 aa26.42■■□□□ 1.82
PDLIM2-206ENST00000409141 PROSER2Q86WR7 435 aaPredicted RBP26.41■■□□□ 1.82
PDLIM2-206ENST00000409141 TOM1O60784 492 aa26.4■■□□□ 1.82
PDLIM2-206ENST00000409141 DIP2AQ14689 1571 aa26.37■■□□□ 1.81
PDLIM2-206ENST00000409141 PIK3R4Q99570 1358 aa26.35■■□□□ 1.81
PDLIM2-206ENST00000409141 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
PDLIM2-206ENST00000409141 RBM33Q96EV2 1170 aaKnown RBP26.35■■□□□ 1.81
PDLIM2-206ENST00000409141 TMEM94Q12767 1356 aa26.35■■□□□ 1.81
PDLIM2-206ENST00000409141 SETBP1Q9Y6X0 1596 aa26.35■■□□□ 1.81
PDLIM2-206ENST00000409141 ANKRD30BQ9BXX2 1392 aa26.34■■□□□ 1.81
PDLIM2-206ENST00000409141 NWD1Q149M9 1564 aa26.33■■□□□ 1.81
PDLIM2-206ENST00000409141 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
PDLIM2-206ENST00000409141 PIP4K2BP78356 416 aa26.33■■□□□ 1.81
PDLIM2-206ENST00000409141 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-206ENST00000409141 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-206ENST00000409141 AMOTL2Q9Y2J4 779 aa26.32■■□□□ 1.8
PDLIM2-206ENST00000409141 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
PDLIM2-206ENST00000409141 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-206ENST00000409141 METP08581 1390 aa26.29■■□□□ 1.8
PDLIM2-206ENST00000409141 PPLO60437 1756 aa26.28■■□□□ 1.8
PDLIM2-206ENST00000409141 PTPRUQ92729 1446 aa26.28■■□□□ 1.8
PDLIM2-206ENST00000409141 ADGRF5Q8IZF2 1346 aa26.28■■□□□ 1.8
PDLIM2-206ENST00000409141 XIRP1Q702N8 1843 aaKnown RBP26.26■■□□□ 1.79
PDLIM2-206ENST00000409141 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
PDLIM2-206ENST00000409141 ALKQ9UM73 1620 aa26.21■■□□□ 1.79
PDLIM2-206ENST00000409141 MSH6P52701 1360 aa26.21■■□□□ 1.79
PDLIM2-206ENST00000409141 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.78
PDLIM2-206ENST00000409141 IFT172Q9UG01 1749 aa26.18■■□□□ 1.78
PDLIM2-206ENST00000409141 C19orf44Q9H6X5 657 aa26.16■■□□□ 1.78
PDLIM2-206ENST00000409141 XRN1Q8IZH2 1706 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-206ENST00000409141 HSPA1LP34931 641 aa26.14■■□□□ 1.78
PDLIM2-206ENST00000409141 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.78
PDLIM2-206ENST00000409141 PIK3C2GO75747 1445 aa26.13■■□□□ 1.77
PDLIM2-206ENST00000409141 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
PDLIM2-206ENST00000409141 SETD1AO15047 1707 aaKnown RBP26.13■■□□□ 1.77
PDLIM2-206ENST00000409141 SLAIN2Q9P270 581 aa26.11■■□□□ 1.77
PDLIM2-206ENST00000409141 MYOM2P54296 1465 aa26.11■■□□□ 1.77
PDLIM2-206ENST00000409141 ATF3P18847 181 aa26.11■■□□□ 1.77
PDLIM2-206ENST00000409141 TMEM132EQ6IEE7 984 aa26.11■■□□□ 1.77
PDLIM2-206ENST00000409141 C14orf93Q9H972 538 aaKnown RBP26.1■■□□□ 1.77
PDLIM2-206ENST00000409141 CFAP70Q5T0N1 1121 aa26.09■■□□□ 1.77
PDLIM2-206ENST00000409141 CADPS2Q86UW7 1296 aa26.09■■□□□ 1.77
PDLIM2-206ENST00000409141 STAC3Q96MF2 364 aa26.09■■□□□ 1.77
PDLIM2-206ENST00000409141 STK26Q9P289 416 aa26.09■■□□□ 1.77
PDLIM2-206ENST00000409141 NRXN1Q9ULB1 1477 aa26.08■■□□□ 1.77
PDLIM2-206ENST00000409141 ROBO2Q9HCK4 1378 aa26.07■■□□□ 1.76
PDLIM2-206ENST00000409141 FAM135BQ49AJ0 1406 aa26.07■■□□□ 1.76
PDLIM2-206ENST00000409141 PTCH1Q13635 1447 aa26.06■■□□□ 1.76
PDLIM2-206ENST00000409141 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
PDLIM2-206ENST00000409141 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.04■■□□□ 1.76
PDLIM2-206ENST00000409141 LRPPRCP42704 1394 aaKnown RBP26.03■■□□□ 1.76
PDLIM2-206ENST00000409141 PRAG1Q86YV5 1406 aa26.02■■□□□ 1.76
PDLIM2-206ENST00000409141 ABCC11Q96J66 1382 aa26.01■■□□□ 1.75
PDLIM2-206ENST00000409141 SIN3AQ96ST3 1273 aa26.01■■□□□ 1.75
PDLIM2-206ENST00000409141 ADGRL3Q9HAR2 1447 aa26.01■■□□□ 1.75
PDLIM2-206ENST00000409141 DCCP43146 1447 aa26■■□□□ 1.75
PDLIM2-206ENST00000409141 ASXL1Q8IXJ9 1541 aa26■■□□□ 1.75
PDLIM2-206ENST00000409141 YTHDC2Q9H6S0 1430 aaKnown RBP25.99■■□□□ 1.75
PDLIM2-206ENST00000409141 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
PDLIM2-206ENST00000409141 ROBO1Q9Y6N7 1651 aa25.98■■□□□ 1.75
PDLIM2-206ENST00000409141 WAPLQ7Z5K2 1190 aa25.98■■□□□ 1.75
PDLIM2-206ENST00000409141 TECPR2O15040 1411 aa25.96■■□□□ 1.75
PDLIM2-206ENST00000409141 LAMC1P11047 1609 aa25.96■■□□□ 1.75
PDLIM2-206ENST00000409141 SIRT1Q96EB6 747 aa25.94■■□□□ 1.74
PDLIM2-206ENST00000409141 NALCNQ8IZF0 1738 aa25.93■■□□□ 1.74
PDLIM2-206ENST00000409141 MST1RQ04912 1400 aa25.92■■□□□ 1.74
PDLIM2-206ENST00000409141 L3MBTL2Q969R5 705 aa25.91■■□□□ 1.74
PDLIM2-206ENST00000409141 BRINP3Q76B58 766 aa25.91■■□□□ 1.74
PDLIM2-206ENST00000409141 PLEKHH1Q9ULM0 1364 aa25.91■■□□□ 1.74
PDLIM2-206ENST00000409141 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
PDLIM2-206ENST00000409141 TRAK1Q9UPV9 953 aa25.89■■□□□ 1.73
PDLIM2-206ENST00000409141 KNDC1Q76NI1 1749 aa25.89■■□□□ 1.73
PDLIM2-206ENST00000409141 PRAM1Q96QH2 718 aa25.87■■□□□ 1.73
PDLIM2-206ENST00000409141 POGKQ9P215 609 aa25.87■■□□□ 1.73
PDLIM2-206ENST00000409141 ADGRB1O14514 1584 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms