RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 PMFBP1Q8TBY8 1022 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 CARD11Q9BXL7 1154 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 PANK2Q9BZ23 570 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 SLKQ9H2G2 1235 aaPredicted RBP3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 RNF17Q9BXT8 1623 aaKnown RBP3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 POLA1P09884 1462 aaPredicted RBP3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 ABCC10Q5T3U5 1492 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 SHANK2Q9UPX8 1470 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 ERBB4Q15303 1308 aa3.91□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 GPRASP1Q5JY77 1395 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 CDC42BPAQ5VT25 1732 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 SYNMO15061 1565 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 IQGAP2Q13576 1575 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 RTEL1-TNFRSF6BF6WH68 1400 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 PIK3C2GO75747 1445 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 NUP160Q12769 1436 aa3.9□□□□□ -1.78
RNU6ATAC40P-201ENST00000408580 DYNC1I1O14576 645 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ZNF500O60304 480 aaPredicted RBP3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 MSNP26038 577 aaKnown RBP3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 MCM5P33992 734 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CSPP1Q1MSJ5 1256 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ANP32BQ92688 251 aaKnown RBP3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GBP4Q96PP9 640 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 IQGAP1P46940 1657 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PBRM1Q86U86 1689 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CDK13Q14004 1512 aaKnown RBP3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 FAM135AQ9P2D6 1515 aa3.9□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 NPC1L1Q9UHC9 1359 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PLEKHH1Q9ULM0 1364 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PTPRGP23470 1445 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RAPGEF6Q8TEU7 1601 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ST20-MTHFSA0A0A6YYL1 179 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SEC24BO95487 1268 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 IGHDP01880 384 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 DDIT3P35638 169 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RIPK4P57078 832 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 HSCBQ8IWL3 235 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SNX21Q969T3 373 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CLUAP1Q96AJ1 413 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ZNF692Q9BU19 519 aaPredicted RBP3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GTPBP4Q9BZE4 634 aaKnown RBP3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 FANCD2Q9BXW9 1451 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RAD54L2Q9Y4B4 1467 aa3.89□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PRAG1Q86YV5 1406 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 MYOM1P52179 1685 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CCDC141Q6ZP82 1450 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SENP3-EIF4A1A0A087X0R7 540 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 E9PSI1 815 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 KIF20AO95235 890 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 TNNT2P45379 298 aaPredicted RBP3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PDE4CQ08493 712 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 DMTNQ08495 405 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PKD2Q13563 968 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CNGB1Q14028 1251 aaPredicted RBP3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RAB3GAP1Q15042 981 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 WDR43Q15061 677 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 TAF3Q5VWG9 929 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CLEC17AQ6ZS10 378 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SMC5Q8IY18 1101 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GZF1Q9H116 711 aaPredicted RBP3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 NOL7Q9UMY1 257 aaKnown RBP3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 REREQ9P2R6 1566 aa3.88□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 KDM5AP29375 1690 aaKnown RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ERBINQ96RT1 1412 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ANKRD50Q9ULJ7 1429 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 YEATS2Q9ULM3 1422 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GRIN2AQ12879 1464 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ASXL1Q8IXJ9 1541 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 UQCRHLA0A096LP55 91 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GOLGA6L22H0YM25 854 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 LETM1O95202 739 aaPredicted RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 UQCRHP07919 91 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 NASPP49321 788 aaPredicted RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RBM25P49756 843 aaKnown RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ZNF445P59923 1031 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 TMF1P82094 1093 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 NCBP3Q53F19 620 aaKnown RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ZNF326Q5BKZ1 582 aaKnown RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SASS6Q6UVJ0 657 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 GAS2L3Q86XJ1 694 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PDLIM2Q96JY6 352 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CCDC94Q9BW85 323 aaPredicted RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 C22orf23Q9BZE7 217 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ADAMTS8Q9UP79 889 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 UNC13BO14795 1591 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ARHGEF5Q12774 1597 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 CEP152O94986 1710 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 KIAA1210Q9ULL0 1709 aa3.87□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 SYNJ2O15056 1496 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 KIAA0556O60303 1618 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 A0A0U1RQG5 324 aaPredicted RBP3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 HSP90AB1P08238 724 aaKnown RBP3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PPP2R1AP30153 589 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 KLHL40Q2TBA0 621 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 TNPO1Q92973 898 aaKnown RBP3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 ARXQ96QS3 562 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PANK3Q9H999 370 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 FAM13BQ9NYF5 915 aa3.86□□□□□ -1.79
RNU6ATAC40P-201ENST00000408580 PDZRN3Q9UPQ7 1066 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms