RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
CBX6-202ENST00000407418 IGF1RP08069 1367 aa20.38■□□□□ 0.85
CBX6-202ENST00000407418 KRI1Q8N9T8 703 aaKnown RBP20.38■□□□□ 0.85
CBX6-202ENST00000407418 NUTM2BA6NNL0 878 aaPredicted RBP20.37■□□□□ 0.85
CBX6-202ENST00000407418 NUTM2EB1AL46 878 aaPredicted RBP20.37■□□□□ 0.85
CBX6-202ENST00000407418 NUTM2AQ8IVF1 878 aaPredicted RBP20.37■□□□□ 0.85
CBX6-202ENST00000407418 NOC3LQ8WTT2 800 aaKnown RBP20.37■□□□□ 0.85
CBX6-202ENST00000407418 CC2D2AQ9P2K1 1620 aa20.36■□□□□ 0.85
CBX6-202ENST00000407418 ELL2O00472 640 aaPredicted RBP20.35■□□□□ 0.85
CBX6-202ENST00000407418 ANKLE2Q86XL3 938 aa20.35■□□□□ 0.85
CBX6-202ENST00000407418 CEP89Q96ST8 783 aa20.35■□□□□ 0.85
CBX6-202ENST00000407418 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
CBX6-202ENST00000407418 NLRP6P59044 892 aa20.35■□□□□ 0.85
CBX6-202ENST00000407418 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
CBX6-202ENST00000407418 HMGB2P26583 209 aaKnown RBP20.34■□□□□ 0.85
CBX6-202ENST00000407418 PLEKHH2Q8IVE3 1493 aa20.34■□□□□ 0.85
CBX6-202ENST00000407418 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
CBX6-202ENST00000407418 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
CBX6-202ENST00000407418 RRBP1Q9P2E9 1410 aaKnown RBP20.33■□□□□ 0.85
CBX6-202ENST00000407418 FYCO1Q9BQS8 1478 aa20.33■□□□□ 0.85
CBX6-202ENST00000407418 USP47Q96K76 1375 aa20.33■□□□□ 0.84
CBX6-202ENST00000407418 ABTB2Q8N961 1025 aa20.33■□□□□ 0.84
CBX6-202ENST00000407418 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
CBX6-202ENST00000407418 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
CBX6-202ENST00000407418 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
CBX6-202ENST00000407418 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
CBX6-202ENST00000407418 E9PSI1 815 aa20.31■□□□□ 0.84
CBX6-202ENST00000407418 PPP1R1BQ9UD71 204 aaPredicted RBP20.31■□□□□ 0.84
CBX6-202ENST00000407418 IFIT2P09913 472 aaKnown RBP20.31■□□□□ 0.84
CBX6-202ENST00000407418 SF3A1Q15459 793 aaKnown RBP20.31■□□□□ 0.84
CBX6-202ENST00000407418 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
CBX6-202ENST00000407418 KIF6Q6ZMV9 814 aa20.31■□□□□ 0.84
CBX6-202ENST00000407418 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.84
CBX6-202ENST00000407418 RBM19Q9Y4C8 960 aaKnown RBP20.3■□□□□ 0.84
CBX6-202ENST00000407418 ST18O60284 1047 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 ZKSCAN2Q63HK3 967 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 RUFY2Q8WXA3 655 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 APPP05067 770 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
CBX6-202ENST00000407418 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
CBX6-202ENST00000407418 H3BQV1 296 aa20.29■□□□□ 0.84
CBX6-202ENST00000407418 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
CBX6-202ENST00000407418 CPLX2Q6PUV4 134 aaKnown RBP20.29■□□□□ 0.84
CBX6-202ENST00000407418 CREBRFQ8IUR6 639 aa20.29■□□□□ 0.84
CBX6-202ENST00000407418 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
CBX6-202ENST00000407418 RIPK4P57078 832 aa20.28■□□□□ 0.84
CBX6-202ENST00000407418 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
CBX6-202ENST00000407418 FAM184AQ8NB25 1140 aa20.28■□□□□ 0.84
CBX6-202ENST00000407418 API5Q9BZZ5 524 aaKnown RBP20.27■□□□□ 0.84
CBX6-202ENST00000407418 PLEKHO1Q53GL0 409 aaPredicted RBP20.27■□□□□ 0.84
CBX6-202ENST00000407418 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
CBX6-202ENST00000407418 WWC1Q8IX03 1113 aa20.27■□□□□ 0.83
CBX6-202ENST00000407418 ERICH2A1L162 156 aa20.26■□□□□ 0.83
CBX6-202ENST00000407418 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
CBX6-202ENST00000407418 TRIM29Q14134 588 aa20.26■□□□□ 0.83
CBX6-202ENST00000407418 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
CBX6-202ENST00000407418 ANKRD50Q9ULJ7 1429 aa20.26■□□□□ 0.83
CBX6-202ENST00000407418 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
CBX6-202ENST00000407418 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
CBX6-202ENST00000407418 TPM2P07951 284 aa20.25■□□□□ 0.83
CBX6-202ENST00000407418 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
CBX6-202ENST00000407418 TRDNQ13061 729 aa20.25■□□□□ 0.83
CBX6-202ENST00000407418 CABP2Q9NPB3 220 aa20.25■□□□□ 0.83
CBX6-202ENST00000407418 CCDC43Q96MW1 224 aaKnown RBP20.24■□□□□ 0.83
CBX6-202ENST00000407418 GNAI1P63096 354 aa20.24■□□□□ 0.83
CBX6-202ENST00000407418 TPD52L1Q16890 204 aaPredicted RBP20.23■□□□□ 0.83
CBX6-202ENST00000407418 HSP90AB4PQ58FF6 505 aa20.23■□□□□ 0.83
CBX6-202ENST00000407418 ARID3AQ99856 593 aa20.22■□□□□ 0.83
CBX6-202ENST00000407418 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
CBX6-202ENST00000407418 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
CBX6-202ENST00000407418 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
CBX6-202ENST00000407418 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
CBX6-202ENST00000407418 GAS2L2Q8NHY3 880 aa20.21■□□□□ 0.83
CBX6-202ENST00000407418 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
CBX6-202ENST00000407418 AIMP1Q12904 312 aaKnown RBP20.2■□□□□ 0.82
CBX6-202ENST00000407418 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
CBX6-202ENST00000407418 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
CBX6-202ENST00000407418 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
CBX6-202ENST00000407418 NESP48681 1621 aa20.2■□□□□ 0.82
CBX6-202ENST00000407418 PDE4CQ08493 712 aa20.2■□□□□ 0.82
CBX6-202ENST00000407418 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
CBX6-202ENST00000407418 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
CBX6-202ENST00000407418 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
CBX6-202ENST00000407418 TMEM132EQ6IEE7 984 aa20.18■□□□□ 0.82
CBX6-202ENST00000407418 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
CBX6-202ENST00000407418 HMOX1P09601 288 aa20.18■□□□□ 0.82
CBX6-202ENST00000407418 ZKSCAN1P17029 563 aaPredicted RBP20.17■□□□□ 0.82
CBX6-202ENST00000407418 SPG7Q9UQ90 795 aa20.17■□□□□ 0.82
CBX6-202ENST00000407418 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 PES1O00541 588 aaKnown RBP20.16■□□□□ 0.82
CBX6-202ENST00000407418 GGNBP2Q9H3C7 697 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 KIF21BO75037 1637 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 TPM3P06753 285 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 RNF20Q5VTR2 975 aa20.16■□□□□ 0.82
CBX6-202ENST00000407418 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms