RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 WASHC2CQ9Y4E1 1318 aa21.67■■□□□ 1.06
LSP1-204ENST00000406638 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
LSP1-204ENST00000406638 PRAG1Q86YV5 1406 aa21.66■■□□□ 1.06
LSP1-204ENST00000406638 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
LSP1-204ENST00000406638 KIF7Q2M1P5 1343 aa21.65■■□□□ 1.06
LSP1-204ENST00000406638 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
LSP1-204ENST00000406638 RALGAPBQ86X10 1494 aa21.65■■□□□ 1.06
LSP1-204ENST00000406638 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
LSP1-204ENST00000406638 ST20-MTHFSA0A0A6YYL1 179 aa21.64■■□□□ 1.05
LSP1-204ENST00000406638 TRPM2O94759 1503 aa21.64■■□□□ 1.05
LSP1-204ENST00000406638 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
LSP1-204ENST00000406638 KIF13AQ9H1H9 1805 aa21.63■■□□□ 1.05
LSP1-204ENST00000406638 NPATQ14207 1427 aa21.63■■□□□ 1.05
LSP1-204ENST00000406638 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
LSP1-204ENST00000406638 CHGAP10645 457 aaKnown RBP21.61■■□□□ 1.05
LSP1-204ENST00000406638 BRPF3Q9ULD4 1205 aa21.61■■□□□ 1.05
LSP1-204ENST00000406638 RNF17Q9BXT8 1623 aaKnown RBP21.61■■□□□ 1.05
LSP1-204ENST00000406638 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
LSP1-204ENST00000406638 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
LSP1-204ENST00000406638 MLECQ14165 292 aa21.59■■□□□ 1.05
LSP1-204ENST00000406638 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
LSP1-204ENST00000406638 UBE2Q2Q8WVN8 375 aa21.59■■□□□ 1.05
LSP1-204ENST00000406638 ABCC3O15438 1527 aa21.58■■□□□ 1.04
LSP1-204ENST00000406638 PDE4AP27815 886 aa21.57■■□□□ 1.04
LSP1-204ENST00000406638 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
LSP1-204ENST00000406638 NUTM2DQ5VT03 806 aaPredicted RBP21.55■■□□□ 1.04
LSP1-204ENST00000406638 TRPM1Q7Z4N2 1603 aa21.55■■□□□ 1.04
LSP1-204ENST00000406638 LMTK2Q8IWU2 1503 aa21.54■■□□□ 1.04
LSP1-204ENST00000406638 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
LSP1-204ENST00000406638 SIGLEC1Q9BZZ2 1709 aa21.53■■□□□ 1.04
LSP1-204ENST00000406638 FBXO31Q5XUX0 539 aaPredicted RBP21.52■■□□□ 1.04
LSP1-204ENST00000406638 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
LSP1-204ENST00000406638 EXOC6Q8TAG9 804 aa21.52■■□□□ 1.04
LSP1-204ENST00000406638 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
LSP1-204ENST00000406638 ZMYM4Q5VZL5 1548 aa21.51■■□□□ 1.03
LSP1-204ENST00000406638 BACH2Q9BYV9 841 aa21.5■■□□□ 1.03
LSP1-204ENST00000406638 MROH2AA6NES4 1674 aa21.49■■□□□ 1.03
LSP1-204ENST00000406638 CFAP70Q5T0N1 1121 aa21.48■■□□□ 1.03
LSP1-204ENST00000406638 GSE1Q14687 1217 aa21.47■■□□□ 1.03
LSP1-204ENST00000406638 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
LSP1-204ENST00000406638 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
LSP1-204ENST00000406638 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
LSP1-204ENST00000406638 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
LSP1-204ENST00000406638 IDI1Q13907 227 aa21.45■■□□□ 1.02
LSP1-204ENST00000406638 NOS1P29475 1434 aa21.43■■□□□ 1.02
LSP1-204ENST00000406638 RRP1P56182 461 aaKnown RBP21.43■■□□□ 1.02
LSP1-204ENST00000406638 TESK2Q96S53 571 aa21.43■■□□□ 1.02
LSP1-204ENST00000406638 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
LSP1-204ENST00000406638 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
LSP1-204ENST00000406638 SYNMO15061 1565 aa21.42■■□□□ 1.02
LSP1-204ENST00000406638 TMC1Q8TDI8 760 aa21.42■■□□□ 1.02
LSP1-204ENST00000406638 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
LSP1-204ENST00000406638 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
LSP1-204ENST00000406638 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
LSP1-204ENST00000406638 NFKBIBQ15653 356 aa21.4■■□□□ 1.02
LSP1-204ENST00000406638 KIF1BO60333 1816 aa21.39■■□□□ 1.01
LSP1-204ENST00000406638 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
LSP1-204ENST00000406638 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
LSP1-204ENST00000406638 MS4A1P11836 297 aa21.37■■□□□ 1.01
LSP1-204ENST00000406638 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
LSP1-204ENST00000406638 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
LSP1-204ENST00000406638 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
LSP1-204ENST00000406638 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
LSP1-204ENST00000406638 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
LSP1-204ENST00000406638 DDRGK1Q96HY6 314 aa21.32■■□□□ 1
LSP1-204ENST00000406638 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
LSP1-204ENST00000406638 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
LSP1-204ENST00000406638 MYOM2P54296 1465 aa21.3■■□□□ 1
LSP1-204ENST00000406638 AGLP35573 1532 aa21.3■■□□□ 1
LSP1-204ENST00000406638 IFT172Q9UG01 1749 aa21.3■■□□□ 1
LSP1-204ENST00000406638 TRAK1Q9UPV9 953 aa21.29■■□□□ 1
LSP1-204ENST00000406638 PIK3C2BO00750 1634 aa21.29■■□□□ 1
LSP1-204ENST00000406638 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
LSP1-204ENST00000406638 PREX1Q8TCU6 1659 aa21.28■■□□□ 1
LSP1-204ENST00000406638 PLIN1O60240 522 aa21.28■■□□□ 1
LSP1-204ENST00000406638 LAMC1P11047 1609 aa21.28■■□□□ 1
LSP1-204ENST00000406638 SCAF11Q99590 1463 aaKnown RBP21.28■■□□□ 1
LSP1-204ENST00000406638 REREQ9P2R6 1566 aa21.28■■□□□ 1
LSP1-204ENST00000406638 ERVK-7P63135 1459 aa21.27■■□□□ 1
LSP1-204ENST00000406638 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
LSP1-204ENST00000406638 NEURL4Q96JN8 1562 aa21.27■■□□□ 1
LSP1-204ENST00000406638 NRXN1Q9ULB1 1477 aa21.27■□□□□ 0.99
LSP1-204ENST00000406638 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
LSP1-204ENST00000406638 SLC52A1Q9NWF4 448 aa21.26■□□□□ 0.99
LSP1-204ENST00000406638 IQGAP1P46940 1657 aa21.26■□□□□ 0.99
LSP1-204ENST00000406638 MYO5BQ9ULV0 1848 aa21.25■□□□□ 0.99
LSP1-204ENST00000406638 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
LSP1-204ENST00000406638 PPLO60437 1756 aa21.25■□□□□ 0.99
LSP1-204ENST00000406638 TMF1P82094 1093 aa21.25■□□□□ 0.99
LSP1-204ENST00000406638 CEBPAP49715 358 aaPredicted RBP21.25■□□□□ 0.99
LSP1-204ENST00000406638 C14orf93Q9H972 538 aaKnown RBP21.25■□□□□ 0.99
LSP1-204ENST00000406638 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
LSP1-204ENST00000406638 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
LSP1-204ENST00000406638 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
LSP1-204ENST00000406638 PANK3Q9H999 370 aa21.23■□□□□ 0.99
LSP1-204ENST00000406638 CDCA7LQ96GN5 454 aa21.22■□□□□ 0.99
LSP1-204ENST00000406638 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
LSP1-204ENST00000406638 FRAT2O75474 233 aaPredicted RBP21.22■□□□□ 0.99
LSP1-204ENST00000406638 SAFB2Q14151 953 aaKnown RBP eCLIP21.2■□□□□ 0.98
LSP1-204ENST00000406638 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms