RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
GDPD3-202ENST00000406256 SPATA31E1Q6ZUB1 1445 aa23.52■■□□□ 1.36
GDPD3-202ENST00000406256 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
GDPD3-202ENST00000406256 PPLO60437 1756 aa23.52■■□□□ 1.36
GDPD3-202ENST00000406256 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
GDPD3-202ENST00000406256 IFT172Q9UG01 1749 aa23.52■■□□□ 1.35
GDPD3-202ENST00000406256 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
GDPD3-202ENST00000406256 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
GDPD3-202ENST00000406256 EID1Q9Y6B2 187 aa23.47■■□□□ 1.35
GDPD3-202ENST00000406256 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
GDPD3-202ENST00000406256 ZNF335Q9H4Z2 1342 aaPredicted RBP23.45■■□□□ 1.34
GDPD3-202ENST00000406256 NUTM2DQ5VT03 806 aaPredicted RBP23.43■■□□□ 1.34
GDPD3-202ENST00000406256 ADAMTS13Q76LX8 1427 aa23.43■■□□□ 1.34
GDPD3-202ENST00000406256 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
GDPD3-202ENST00000406256 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
GDPD3-202ENST00000406256 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
GDPD3-202ENST00000406256 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.4■■□□□ 1.34
GDPD3-202ENST00000406256 CHD2O14647 1828 aaKnown RBP23.39■■□□□ 1.34
GDPD3-202ENST00000406256 DIP2AQ14689 1571 aa23.39■■□□□ 1.33
GDPD3-202ENST00000406256 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
GDPD3-202ENST00000406256 ILDR1Q86SU0 546 aaPredicted RBP23.38■■□□□ 1.33
GDPD3-202ENST00000406256 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
GDPD3-202ENST00000406256 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
GDPD3-202ENST00000406256 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
GDPD3-202ENST00000406256 SLC26A8Q96RN1 970 aa23.36■■□□□ 1.33
GDPD3-202ENST00000406256 XIRP1Q702N8 1843 aaKnown RBP23.35■■□□□ 1.33
GDPD3-202ENST00000406256 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
GDPD3-202ENST00000406256 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
GDPD3-202ENST00000406256 CPS1P31327 1500 aa23.34■■□□□ 1.33
GDPD3-202ENST00000406256 RGL3Q3MIN7 710 aa23.32■■□□□ 1.32
GDPD3-202ENST00000406256 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
GDPD3-202ENST00000406256 NRXN1Q9ULB1 1477 aa23.31■■□□□ 1.32
GDPD3-202ENST00000406256 CERKQ8TCT0 537 aa23.3■■□□□ 1.32
GDPD3-202ENST00000406256 TBX22Q9Y458 520 aa23.3■■□□□ 1.32
GDPD3-202ENST00000406256 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
GDPD3-202ENST00000406256 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
GDPD3-202ENST00000406256 MYOM2P54296 1465 aa23.29■■□□□ 1.32
GDPD3-202ENST00000406256 LRRC7Q96NW7 1537 aa23.29■■□□□ 1.32
GDPD3-202ENST00000406256 ADGRF5Q8IZF2 1346 aa23.29■■□□□ 1.32
GDPD3-202ENST00000406256 IQSEC2Q5JU85 1478 aa23.28■■□□□ 1.32
GDPD3-202ENST00000406256 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
GDPD3-202ENST00000406256 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
GDPD3-202ENST00000406256 VGFO15240 615 aaPredicted RBP23.27■■□□□ 1.31
GDPD3-202ENST00000406256 ASXL1Q8IXJ9 1541 aa23.25■■□□□ 1.31
GDPD3-202ENST00000406256 METP08581 1390 aa23.25■■□□□ 1.31
GDPD3-202ENST00000406256 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
GDPD3-202ENST00000406256 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
GDPD3-202ENST00000406256 KCNA6P17658 529 aa23.24■■□□□ 1.31
GDPD3-202ENST00000406256 BCANQ96GW7 911 aa23.24■■□□□ 1.31
GDPD3-202ENST00000406256 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
GDPD3-202ENST00000406256 LAMC1P11047 1609 aa23.19■■□□□ 1.3
GDPD3-202ENST00000406256 PRAG1Q86YV5 1406 aa23.17■■□□□ 1.3
GDPD3-202ENST00000406256 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
GDPD3-202ENST00000406256 TMEM94Q12767 1356 aa23.14■■□□□ 1.29
GDPD3-202ENST00000406256 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
GDPD3-202ENST00000406256 AMOTL2Q9Y2J4 779 aa23.14■■□□□ 1.29
GDPD3-202ENST00000406256 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
GDPD3-202ENST00000406256 RBM33Q96EV2 1170 aaKnown RBP23.11■■□□□ 1.29
GDPD3-202ENST00000406256 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
GDPD3-202ENST00000406256 KIAA1210Q9ULL0 1709 aa23.1■■□□□ 1.29
GDPD3-202ENST00000406256 PTCH1Q13635 1447 aa23.1■■□□□ 1.29
GDPD3-202ENST00000406256 TECPR2O15040 1411 aa23.09■■□□□ 1.29
GDPD3-202ENST00000406256 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
GDPD3-202ENST00000406256 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
GDPD3-202ENST00000406256 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.29
GDPD3-202ENST00000406256 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.29
GDPD3-202ENST00000406256 FBXO41Q8TF61 875 aa23.08■■□□□ 1.29
GDPD3-202ENST00000406256 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
GDPD3-202ENST00000406256 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
GDPD3-202ENST00000406256 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
GDPD3-202ENST00000406256 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
GDPD3-202ENST00000406256 ROBO2Q9HCK4 1378 aa23.07■■□□□ 1.28
GDPD3-202ENST00000406256 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
GDPD3-202ENST00000406256 LRPPRCP42704 1394 aaKnown RBP23.05■■□□□ 1.28
GDPD3-202ENST00000406256 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
GDPD3-202ENST00000406256 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
GDPD3-202ENST00000406256 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
GDPD3-202ENST00000406256 TRPM1Q7Z4N2 1603 aa23.02■■□□□ 1.28
GDPD3-202ENST00000406256 DLC1Q96QB1 1528 aa22.99■■□□□ 1.27
GDPD3-202ENST00000406256 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
GDPD3-202ENST00000406256 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
GDPD3-202ENST00000406256 UBAP1LF5GYI3 381 aa22.99■■□□□ 1.27
GDPD3-202ENST00000406256 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
GDPD3-202ENST00000406256 PLEKHH1Q9ULM0 1364 aa22.97■■□□□ 1.27
GDPD3-202ENST00000406256 MSH6P52701 1360 aa22.96■■□□□ 1.27
GDPD3-202ENST00000406256 STK26Q9P289 416 aa22.95■■□□□ 1.26
GDPD3-202ENST00000406256 DCCP43146 1447 aa22.95■■□□□ 1.26
GDPD3-202ENST00000406256 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
GDPD3-202ENST00000406256 TONSLQ96HA7 1378 aa22.93■■□□□ 1.26
GDPD3-202ENST00000406256 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
GDPD3-202ENST00000406256 NBPF8Q3BBV2 869 aa22.93■■□□□ 1.26
GDPD3-202ENST00000406256 TOM1O60784 492 aa22.92■■□□□ 1.26
GDPD3-202ENST00000406256 C19orf44Q9H6X5 657 aa22.92■■□□□ 1.26
GDPD3-202ENST00000406256 CDC42BPGQ6DT37 1551 aa22.92■■□□□ 1.26
GDPD3-202ENST00000406256 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
GDPD3-202ENST00000406256 SIRT1Q96EB6 747 aa22.91■■□□□ 1.26
GDPD3-202ENST00000406256 ROBO1Q9Y6N7 1651 aa22.91■■□□□ 1.26
GDPD3-202ENST00000406256 MST1RQ04912 1400 aa22.89■■□□□ 1.25
GDPD3-202ENST00000406256 ADGRB2O60241 1585 aa22.87■■□□□ 1.25
GDPD3-202ENST00000406256 FMN2Q9NZ56 1722 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms