RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
SNRPD3-203ENST00000404603 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
SNRPD3-203ENST00000404603 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.45
SNRPD3-203ENST00000404603 THEMISQ8N1K5 641 aaPredicted RBP12.2□□□□□ -0.46
SNRPD3-203ENST00000404603 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
SNRPD3-203ENST00000404603 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
SNRPD3-203ENST00000404603 PIK3C2BO00750 1634 aa12.19□□□□□ -0.46
SNRPD3-203ENST00000404603 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
SNRPD3-203ENST00000404603 FBXO31Q5XUX0 539 aaPredicted RBP12.18□□□□□ -0.46
SNRPD3-203ENST00000404603 SYNMO15061 1565 aa12.18□□□□□ -0.46
SNRPD3-203ENST00000404603 ADGRB3O60242 1522 aa12.17□□□□□ -0.46
SNRPD3-203ENST00000404603 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
SNRPD3-203ENST00000404603 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
SNRPD3-203ENST00000404603 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNRPD3-203ENST00000404603 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
SNRPD3-203ENST00000404603 DHX57Q6P158 1386 aaKnown RBP12.16□□□□□ -0.46
SNRPD3-203ENST00000404603 ANKRD30BQ9BXX2 1392 aa12.16□□□□□ -0.46
SNRPD3-203ENST00000404603 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
SNRPD3-203ENST00000404603 HSPA2P54652 639 aa12.15□□□□□ -0.46
SNRPD3-203ENST00000404603 KIF1BO60333 1816 aa12.15□□□□□ -0.46
SNRPD3-203ENST00000404603 ZBTB22O15209 634 aa12.14□□□□□ -0.47
SNRPD3-203ENST00000404603 IDI1Q13907 227 aa12.14□□□□□ -0.47
SNRPD3-203ENST00000404603 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SNRPD3-203ENST00000404603 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
SNRPD3-203ENST00000404603 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
SNRPD3-203ENST00000404603 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
SNRPD3-203ENST00000404603 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
SNRPD3-203ENST00000404603 SLIT1O75093 1534 aa12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 TMEM131LA2VDJ0 1609 aa12.11□□□□□ -0.47
SNRPD3-203ENST00000404603 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
SNRPD3-203ENST00000404603 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
SNRPD3-203ENST00000404603 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
SNRPD3-203ENST00000404603 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.47
SNRPD3-203ENST00000404603 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.47
SNRPD3-203ENST00000404603 ZFYVE9O95405 1425 aa12.07□□□□□ -0.48
SNRPD3-203ENST00000404603 SPATA31E1Q6ZUB1 1445 aa12.07□□□□□ -0.48
SNRPD3-203ENST00000404603 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
SNRPD3-203ENST00000404603 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
SNRPD3-203ENST00000404603 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
SNRPD3-203ENST00000404603 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 TXNDC2Q86VQ3 553 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 MED14O60244 1454 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 MYOM2P54296 1465 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
SNRPD3-203ENST00000404603 PLEKHG1Q9ULL1 1385 aa12.04□□□□□ -0.48
SNRPD3-203ENST00000404603 NEXMIFQ5QGS0 1516 aa12.03□□□□□ -0.48
SNRPD3-203ENST00000404603 RGL3Q3MIN7 710 aa12.02□□□□□ -0.49
SNRPD3-203ENST00000404603 BCANQ96GW7 911 aa12.02□□□□□ -0.49
SNRPD3-203ENST00000404603 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
SNRPD3-203ENST00000404603 LAMC1P11047 1609 aa12.01□□□□□ -0.49
SNRPD3-203ENST00000404603 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
SNRPD3-203ENST00000404603 IQGAP1P46940 1657 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 PPLO60437 1756 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 DCAF11Q8TEB1 546 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 PIK3R4Q99570 1358 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 IFT172Q9UG01 1749 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 MYO5BQ9ULV0 1848 aa12□□□□□ -0.49
SNRPD3-203ENST00000404603 NRXN1Q9ULB1 1477 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 PIK3C2GO75747 1445 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 LTKP29376 864 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 TBX22Q9Y458 520 aa11.97□□□□□ -0.49
SNRPD3-203ENST00000404603 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
SNRPD3-203ENST00000404603 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
SNRPD3-203ENST00000404603 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
SNRPD3-203ENST00000404603 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
SNRPD3-203ENST00000404603 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
SNRPD3-203ENST00000404603 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
SNRPD3-203ENST00000404603 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
SNRPD3-203ENST00000404603 CPS1P31327 1500 aa11.92□□□□□ -0.5
SNRPD3-203ENST00000404603 NKTRP30414 1462 aaKnown RBP11.92□□□□□ -0.5
SNRPD3-203ENST00000404603 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
SNRPD3-203ENST00000404603 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
SNRPD3-203ENST00000404603 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
SNRPD3-203ENST00000404603 EIF3AQ14152 1382 aaKnown RBP11.91□□□□□ -0.5
SNRPD3-203ENST00000404603 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
SNRPD3-203ENST00000404603 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
SNRPD3-203ENST00000404603 ADAMTS13Q76LX8 1427 aa11.9□□□□□ -0.5
SNRPD3-203ENST00000404603 KCNA6P17658 529 aa11.89□□□□□ -0.51
SNRPD3-203ENST00000404603 SLC26A8Q96RN1 970 aa11.89□□□□□ -0.51
SNRPD3-203ENST00000404603 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
SNRPD3-203ENST00000404603 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
SNRPD3-203ENST00000404603 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
SNRPD3-203ENST00000404603 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
SNRPD3-203ENST00000404603 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
SNRPD3-203ENST00000404603 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
SNRPD3-203ENST00000404603 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
SNRPD3-203ENST00000404603 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
SNRPD3-203ENST00000404603 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
SNRPD3-203ENST00000404603 TECPR2O15040 1411 aa11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms