RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 THEMISQ8N1K5 641 aaPredicted RBP11.15□□□□□ -0.62
USP16-204ENST00000399976 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
USP16-204ENST00000399976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.633e-8■□□□□ 10.7
USP16-204ENST00000399976 CHD2O14647 1828 aaKnown RBP11.14□□□□□ -0.63
USP16-204ENST00000399976 AEBP2Q6ZN18 517 aaPredicted RBP11.13□□□□□ -0.63
USP16-204ENST00000399976 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
USP16-204ENST00000399976 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
USP16-204ENST00000399976 PIK3R4Q99570 1358 aa11.12□□□□□ -0.63
USP16-204ENST00000399976 DMRT2Q9Y5R5 561 aa11.12□□□□□ -0.63
USP16-204ENST00000399976 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
USP16-204ENST00000399976 FBXO31Q5XUX0 539 aaPredicted RBP11.12□□□□□ -0.63
USP16-204ENST00000399976 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP16-204ENST00000399976 CEBPAP49715 358 aaPredicted RBP11.11□□□□□ -0.63
USP16-204ENST00000399976 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
USP16-204ENST00000399976 CPS1P31327 1500 aa11.11□□□□□ -0.63
USP16-204ENST00000399976 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
USP16-204ENST00000399976 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
USP16-204ENST00000399976 IDI1Q13907 227 aa11.1□□□□□ -0.63
USP16-204ENST00000399976 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
USP16-204ENST00000399976 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
USP16-204ENST00000399976 NCOA3Q9Y6Q9 1424 aa11.07□□□□□ -0.64
USP16-204ENST00000399976 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
USP16-204ENST00000399976 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
USP16-204ENST00000399976 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
USP16-204ENST00000399976 ANKLE2Q86XL3 938 aa11.06□□□□□ -0.64
USP16-204ENST00000399976 DLC1Q96QB1 1528 aa11.05□□□□□ -0.64
USP16-204ENST00000399976 ALKQ9UM73 1620 aa11.05□□□□□ -0.64
USP16-204ENST00000399976 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
USP16-204ENST00000399976 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
USP16-204ENST00000399976 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
USP16-204ENST00000399976 ADAMTS13Q76LX8 1427 aa11.04□□□□□ -0.64
USP16-204ENST00000399976 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
USP16-204ENST00000399976 TECPR2O15040 1411 aa11.04□□□□□ -0.64
USP16-204ENST00000399976 PTCH1Q13635 1447 aa11.02□□□□□ -0.65
USP16-204ENST00000399976 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
USP16-204ENST00000399976 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
USP16-204ENST00000399976 ADGRB1O14514 1584 aa11.01□□□□□ -0.65
USP16-204ENST00000399976 ADGRB2O60241 1585 aa11□□□□□ -0.65
USP16-204ENST00000399976 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
USP16-204ENST00000399976 ARHGEF28Q8N1W1 1705 aaKnown RBP10.99□□□□□ -0.65
USP16-204ENST00000399976 SIRT1Q96EB6 747 aa10.98□□□□□ -0.65
USP16-204ENST00000399976 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
USP16-204ENST00000399976 LTKP29376 864 aa10.97□□□□□ -0.65
USP16-204ENST00000399976 DCCP43146 1447 aa10.97□□□□□ -0.65
USP16-204ENST00000399976 TXNDC2Q86VQ3 553 aa10.97□□□□□ -0.65
USP16-204ENST00000399976 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
USP16-204ENST00000399976 GPRASP1Q5JY77 1395 aa10.96□□□□□ -0.65
USP16-204ENST00000399976 RALGAPBQ86X10 1494 aa10.96□□□□□ -0.66
USP16-204ENST00000399976 CDC42BPGQ6DT37 1551 aa10.95□□□□□ -0.66
USP16-204ENST00000399976 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
USP16-204ENST00000399976 LRPPRCP42704 1394 aaKnown RBP10.94□□□□□ -0.66
USP16-204ENST00000399976 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
USP16-204ENST00000399976 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
USP16-204ENST00000399976 NALCNQ8IZF0 1738 aa10.93□□□□□ -0.66
USP16-204ENST00000399976 KCNA6P17658 529 aa10.93□□□□□ -0.66
USP16-204ENST00000399976 HSPA2P54652 639 aa10.93□□□□□ -0.66
USP16-204ENST00000399976 C14orf93Q9H972 538 aaKnown RBP10.93□□□□□ -0.66
USP16-204ENST00000399976 FOXD1Q16676 465 aa10.92□□□□□ -0.66
USP16-204ENST00000399976 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
USP16-204ENST00000399976 PCGF6Q9BYE7 350 aa10.91□□□□□ -0.66
USP16-204ENST00000399976 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
USP16-204ENST00000399976 PTPRUQ92729 1446 aa10.91□□□□□ -0.66
USP16-204ENST00000399976 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.9□□□□□ -0.66
USP16-204ENST00000399976 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.66
USP16-204ENST00000399976 YTHDC2Q9H6S0 1430 aaKnown RBP10.9□□□□□ -0.66
USP16-204ENST00000399976 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
USP16-204ENST00000399976 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
USP16-204ENST00000399976 QRICH2Q9H0J4 1663 aa10.89□□□□□ -0.67
USP16-204ENST00000399976 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
USP16-204ENST00000399976 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
USP16-204ENST00000399976 TOPAZ1Q8N9V7 1692 aa10.88□□□□□ -0.67
USP16-204ENST00000399976 ADGRF5Q8IZF2 1346 aa10.88□□□□□ -0.67
USP16-204ENST00000399976 ADGRL3Q9HAR2 1447 aa10.88□□□□□ -0.67
USP16-204ENST00000399976 METP08581 1390 aa10.87□□□□□ -0.67
USP16-204ENST00000399976 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
USP16-204ENST00000399976 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
USP16-204ENST00000399976 NHSL1Q5SYE7 1610 aa10.86□□□□□ -0.67
USP16-204ENST00000399976 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
USP16-204ENST00000399976 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
USP16-204ENST00000399976 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
USP16-204ENST00000399976 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
USP16-204ENST00000399976 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
USP16-204ENST00000399976 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
USP16-204ENST00000399976 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
USP16-204ENST00000399976 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
USP16-204ENST00000399976 USP32Q8NFA0 1604 aa10.81□□□□□ -0.68
USP16-204ENST00000399976 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
USP16-204ENST00000399976 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
USP16-204ENST00000399976 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
USP16-204ENST00000399976 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
USP16-204ENST00000399976 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
USP16-204ENST00000399976 ROBO2Q9HCK4 1378 aa10.8□□□□□ -0.68
USP16-204ENST00000399976 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
USP16-204ENST00000399976 MSH6P52701 1360 aa10.79□□□□□ -0.68
USP16-204ENST00000399976 AKAP12Q02952 1782 aa10.79□□□□□ -0.68
USP16-204ENST00000399976 TMEM94Q12767 1356 aa10.79□□□□□ -0.68
USP16-204ENST00000399976 ROBO1Q9Y6N7 1651 aa10.78□□□□□ -0.68
USP16-204ENST00000399976 SLC26A8Q96RN1 970 aa10.78□□□□□ -0.68
USP16-204ENST00000399976 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
USP16-204ENST00000399976 MST1RQ04912 1400 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms