RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 NPHP4O75161 1426 aaPredicted RBP26.69■■□□□ 1.86
SBF1-203ENST00000399627 ZFYVE9O95405 1425 aa26.69■■□□□ 1.86
SBF1-203ENST00000399627 IQGAP1P46940 1657 aa26.67■■□□□ 1.86
SBF1-203ENST00000399627 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
SBF1-203ENST00000399627 HDGFP51858 240 aaKnown RBP26.63■■□□□ 1.85
SBF1-203ENST00000399627 NUTM2DQ5VT03 806 aaPredicted RBP26.63■■□□□ 1.85
SBF1-203ENST00000399627 PPP1R15AO75807 674 aaPredicted RBP26.62■■□□□ 1.85
SBF1-203ENST00000399627 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.62■■□□□ 1.85
SBF1-203ENST00000399627 SPATA31E1Q6ZUB1 1445 aa26.61■■□□□ 1.85
SBF1-203ENST00000399627 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
SBF1-203ENST00000399627 DHX57Q6P158 1386 aaKnown RBP26.6■■□□□ 1.85
SBF1-203ENST00000399627 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
SBF1-203ENST00000399627 PPLO60437 1756 aa26.57■■□□□ 1.84
SBF1-203ENST00000399627 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
SBF1-203ENST00000399627 PLEKHG1Q9ULL1 1385 aa26.57■■□□□ 1.84
SBF1-203ENST00000399627 BCANQ96GW7 911 aa26.55■■□□□ 1.84
SBF1-203ENST00000399627 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
SBF1-203ENST00000399627 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
SBF1-203ENST00000399627 IFT172Q9UG01 1749 aa26.52■■□□□ 1.84
SBF1-203ENST00000399627 SLC26A8Q96RN1 970 aa26.51■■□□□ 1.83
SBF1-203ENST00000399627 VGFO15240 615 aaPredicted RBP26.48■■□□□ 1.83
SBF1-203ENST00000399627 LTBP4Q8N2S1 1624 aa26.47■■□□□ 1.83
SBF1-203ENST00000399627 NRXN3Q9Y4C0 1643 aa26.47■■□□□ 1.83
SBF1-203ENST00000399627 ADAMTS13Q76LX8 1427 aa26.47■■□□□ 1.83
SBF1-203ENST00000399627 SETBP1Q9Y6X0 1596 aa26.46■■□□□ 1.83
SBF1-203ENST00000399627 STRCP1A6NGW2 1772 aa26.45■■□□□ 1.82
SBF1-203ENST00000399627 SIN3AQ96ST3 1273 aa26.44■■□□□ 1.82
SBF1-203ENST00000399627 DIP2AQ14689 1571 aa26.43■■□□□ 1.82
SBF1-203ENST00000399627 TBX22Q9Y458 520 aa26.43■■□□□ 1.82
SBF1-203ENST00000399627 ADGRF5Q8IZF2 1346 aa26.42■■□□□ 1.82
SBF1-203ENST00000399627 CHD2O14647 1828 aaKnown RBP26.39■■□□□ 1.82
SBF1-203ENST00000399627 MYOM2P54296 1465 aa26.37■■□□□ 1.81
SBF1-203ENST00000399627 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
SBF1-203ENST00000399627 CPS1P31327 1500 aa26.36■■□□□ 1.81
SBF1-203ENST00000399627 CERKQ8TCT0 537 aa26.36■■□□□ 1.81
SBF1-203ENST00000399627 DCAF11Q8TEB1 546 aa26.36■■□□□ 1.81
SBF1-203ENST00000399627 SETD1AO15047 1707 aaKnown RBP26.36■■□□□ 1.81
SBF1-203ENST00000399627 ALKQ9UM73 1620 aa26.36■■□□□ 1.81
SBF1-203ENST00000399627 KCNA6P17658 529 aa26.35■■□□□ 1.81
SBF1-203ENST00000399627 KDM2AQ9Y2K7 1162 aa26.35■■□□□ 1.81
SBF1-203ENST00000399627 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
SBF1-203ENST00000399627 NRXN1Q9ULB1 1477 aa26.33■■□□□ 1.81
SBF1-203ENST00000399627 METP08581 1390 aa26.33■■□□□ 1.8
SBF1-203ENST00000399627 PIK3R4Q99570 1358 aa26.33■■□□□ 1.8
SBF1-203ENST00000399627 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
SBF1-203ENST00000399627 PTPRUQ92729 1446 aa26.31■■□□□ 1.8
SBF1-203ENST00000399627 LRRC7Q96NW7 1537 aa26.29■■□□□ 1.8
SBF1-203ENST00000399627 STAC3Q96MF2 364 aa26.28■■□□□ 1.8
SBF1-203ENST00000399627 NKTRP30414 1462 aaKnown RBP26.27■■□□□ 1.8
SBF1-203ENST00000399627 L3MBTL2Q969R5 705 aa26.26■■□□□ 1.79
SBF1-203ENST00000399627 AMOTL2Q9Y2J4 779 aa26.26■■□□□ 1.79
SBF1-203ENST00000399627 XIRP1Q702N8 1843 aaKnown RBP26.25■■□□□ 1.79
SBF1-203ENST00000399627 XRN1Q8IZH2 1706 aaKnown RBP26.25■■□□□ 1.79
SBF1-203ENST00000399627 PROSER2Q86WR7 435 aaPredicted RBP26.25■■□□□ 1.79
SBF1-203ENST00000399627 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
SBF1-203ENST00000399627 C14orf93Q9H972 538 aaKnown RBP26.24■■□□□ 1.79
SBF1-203ENST00000399627 LAMC1P11047 1609 aa26.24■■□□□ 1.79
SBF1-203ENST00000399627 IQSEC2Q5JU85 1478 aa26.23■■□□□ 1.79
SBF1-203ENST00000399627 ASXL1Q8IXJ9 1541 aa26.22■■□□□ 1.79
SBF1-203ENST00000399627 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
SBF1-203ENST00000399627 TMEM132EQ6IEE7 984 aa26.2■■□□□ 1.78
SBF1-203ENST00000399627 RBM33Q96EV2 1170 aaKnown RBP26.2■■□□□ 1.78
SBF1-203ENST00000399627 TMEM94Q12767 1356 aa26.2■■□□□ 1.78
SBF1-203ENST00000399627 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
SBF1-203ENST00000399627 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
SBF1-203ENST00000399627 PRAG1Q86YV5 1406 aa26.17■■□□□ 1.78
SBF1-203ENST00000399627 STK26Q9P289 416 aa26.14■■□□□ 1.78
SBF1-203ENST00000399627 LRPPRCP42704 1394 aaKnown RBP26.14■■□□□ 1.78
SBF1-203ENST00000399627 KIAA1210Q9ULL0 1709 aa26.13■■□□□ 1.77
SBF1-203ENST00000399627 YTHDC2Q9H6S0 1430 aaKnown RBP26.13■■□□□ 1.77
SBF1-203ENST00000399627 ADGRB1O14514 1584 aa26.12■■□□□ 1.77
SBF1-203ENST00000399627 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
SBF1-203ENST00000399627 PTCH1Q13635 1447 aa26.12■■□□□ 1.77
SBF1-203ENST00000399627 ROBO2Q9HCK4 1378 aa26.11■■□□□ 1.77
SBF1-203ENST00000399627 ABCC11Q96J66 1382 aa26.1■■□□□ 1.77
SBF1-203ENST00000399627 NCOA3Q9Y6Q9 1424 aa26.09■■□□□ 1.77
SBF1-203ENST00000399627 TECPR2O15040 1411 aa26.08■■□□□ 1.77
SBF1-203ENST00000399627 UBAP1LF5GYI3 381 aa26.08■■□□□ 1.77
SBF1-203ENST00000399627 C14orf37Q86TY3 774 aa26.08■■□□□ 1.77
SBF1-203ENST00000399627 FBXO41Q8TF61 875 aa26.08■■□□□ 1.77
SBF1-203ENST00000399627 MSH6P52701 1360 aa26.06■■□□□ 1.76
SBF1-203ENST00000399627 NBPF1Q3BBV0 1214 aa26.05■■□□□ 1.76
SBF1-203ENST00000399627 NBPF8Q3BBV2 869 aa26.05■■□□□ 1.76
SBF1-203ENST00000399627 TRPM1Q7Z4N2 1603 aa26.05■■□□□ 1.76
SBF1-203ENST00000399627 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.04■■□□□ 1.76
SBF1-203ENST00000399627 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
SBF1-203ENST00000399627 TOM1O60784 492 aa26.02■■□□□ 1.76
SBF1-203ENST00000399627 WAPLQ7Z5K2 1190 aa26.02■■□□□ 1.76
SBF1-203ENST00000399627 DLC1Q96QB1 1528 aa26.01■■□□□ 1.75
SBF1-203ENST00000399627 C19orf44Q9H6X5 657 aa26.01■■□□□ 1.75
SBF1-203ENST00000399627 ADGRL3Q9HAR2 1447 aa26.01■■□□□ 1.75
SBF1-203ENST00000399627 PLEKHH1Q9ULM0 1364 aa26.01■■□□□ 1.75
SBF1-203ENST00000399627 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
SBF1-203ENST00000399627 SIRT1Q96EB6 747 aa26■■□□□ 1.75
SBF1-203ENST00000399627 FAM135BQ49AJ0 1406 aa25.99■■□□□ 1.75
SBF1-203ENST00000399627 TIMELESSQ9UNS1 1208 aa25.98■■□□□ 1.75
SBF1-203ENST00000399627 ARHGEF28Q8N1W1 1705 aaKnown RBP25.97■■□□□ 1.75
SBF1-203ENST00000399627 PIP4K2BP78356 416 aa25.96■■□□□ 1.75
SBF1-203ENST00000399627 PRAM1Q96QH2 718 aa25.96■■□□□ 1.75
SBF1-203ENST00000399627 ATF3P18847 181 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms