RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 NEXMIFQ5QGS0 1516 aa25.36■■□□□ 1.65
CSNK1D-204ENST00000398519 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
CSNK1D-204ENST00000398519 EID1Q9Y6B2 187 aa25.35■■□□□ 1.65
CSNK1D-204ENST00000398519 MED14O60244 1454 aa25.35■■□□□ 1.65
CSNK1D-204ENST00000398519 RGL3Q3MIN7 710 aa25.31■■□□□ 1.64
CSNK1D-204ENST00000398519 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
CSNK1D-204ENST00000398519 NPHP4O75161 1426 aaPredicted RBP25.31■■□□□ 1.64
CSNK1D-204ENST00000398519 PPLO60437 1756 aa25.31■■□□□ 1.64
CSNK1D-204ENST00000398519 NUTM2DQ5VT03 806 aaPredicted RBP25.31■■□□□ 1.64
CSNK1D-204ENST00000398519 IFT172Q9UG01 1749 aa25.3■■□□□ 1.64
CSNK1D-204ENST00000398519 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.3■■□□□ 1.64
CSNK1D-204ENST00000398519 HDGFP51858 240 aaKnown RBP25.29■■□□□ 1.64
CSNK1D-204ENST00000398519 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
CSNK1D-204ENST00000398519 RPGRIP1LQ68CZ1 1315 aa25.29■■□□□ 1.64
CSNK1D-204ENST00000398519 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
CSNK1D-204ENST00000398519 DMRT2Q9Y5R5 561 aa25.27■■□□□ 1.64
CSNK1D-204ENST00000398519 PLEKHG1Q9ULL1 1385 aa25.26■■□□□ 1.63
CSNK1D-204ENST00000398519 NEUROD1Q13562 356 aa25.22■■□□□ 1.63
CSNK1D-204ENST00000398519 SENP3Q9H4L4 574 aaPredicted RBP25.22■■□□□ 1.63
CSNK1D-204ENST00000398519 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
CSNK1D-204ENST00000398519 NRXN3Q9Y4C0 1643 aa25.2■■□□□ 1.63
CSNK1D-204ENST00000398519 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
CSNK1D-204ENST00000398519 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
CSNK1D-204ENST00000398519 MYOM2P54296 1465 aa25.19■■□□□ 1.62
CSNK1D-204ENST00000398519 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
CSNK1D-204ENST00000398519 ADAMTS13Q76LX8 1427 aa25.18■■□□□ 1.62
CSNK1D-204ENST00000398519 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
CSNK1D-204ENST00000398519 BCANQ96GW7 911 aa25.17■■□□□ 1.62
CSNK1D-204ENST00000398519 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
CSNK1D-204ENST00000398519 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
CSNK1D-204ENST00000398519 DCAF11Q8TEB1 546 aa25.15■■□□□ 1.62
CSNK1D-204ENST00000398519 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
CSNK1D-204ENST00000398519 PIK3C2GO75747 1445 aa25.13■■□□□ 1.61
CSNK1D-204ENST00000398519 KDM2AQ9Y2K7 1162 aa25.12■■□□□ 1.61
CSNK1D-204ENST00000398519 L3MBTL2Q969R5 705 aa25.11■■□□□ 1.61
CSNK1D-204ENST00000398519 SETD1AO15047 1707 aaKnown RBP25.11■■□□□ 1.61
CSNK1D-204ENST00000398519 ALKQ9UM73 1620 aa25.1■■□□□ 1.61
CSNK1D-204ENST00000398519 TBX22Q9Y458 520 aa25.1■■□□□ 1.61
CSNK1D-204ENST00000398519 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
CSNK1D-204ENST00000398519 STAC3Q96MF2 364 aa25.09■■□□□ 1.61
CSNK1D-204ENST00000398519 TONSLQ96HA7 1378 aa25.08■■□□□ 1.61
CSNK1D-204ENST00000398519 STRCP1A6NGW2 1772 aa25.06■■□□□ 1.6
CSNK1D-204ENST00000398519 METP08581 1390 aa25.05■■□□□ 1.6
CSNK1D-204ENST00000398519 LAMC1P11047 1609 aa25.04■■□□□ 1.6
CSNK1D-204ENST00000398519 LTBP4Q8N2S1 1624 aa25.04■■□□□ 1.6
CSNK1D-204ENST00000398519 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
CSNK1D-204ENST00000398519 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
CSNK1D-204ENST00000398519 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
CSNK1D-204ENST00000398519 CHD2O14647 1828 aaKnown RBP25.03■■□□□ 1.6
CSNK1D-204ENST00000398519 PTPRUQ92729 1446 aa25.01■■□□□ 1.59
CSNK1D-204ENST00000398519 ASXL1Q8IXJ9 1541 aa25.01■■□□□ 1.59
CSNK1D-204ENST00000398519 C14orf93Q9H972 538 aaKnown RBP25.01■■□□□ 1.59
CSNK1D-204ENST00000398519 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
CSNK1D-204ENST00000398519 KCNA6P17658 529 aa24.99■■□□□ 1.59
CSNK1D-204ENST00000398519 XRN1Q8IZH2 1706 aaKnown RBP24.97■■□□□ 1.59
CSNK1D-204ENST00000398519 CPS1P31327 1500 aa24.97■■□□□ 1.59
CSNK1D-204ENST00000398519 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.58
CSNK1D-204ENST00000398519 ADGRB1O14514 1584 aa24.95■■□□□ 1.58
CSNK1D-204ENST00000398519 NKTRP30414 1462 aaKnown RBP24.95■■□□□ 1.58
CSNK1D-204ENST00000398519 AMOTL2Q9Y2J4 779 aa24.94■■□□□ 1.58
CSNK1D-204ENST00000398519 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
CSNK1D-204ENST00000398519 TIMELESSQ9UNS1 1208 aa24.93■■□□□ 1.58
CSNK1D-204ENST00000398519 TRPM1Q7Z4N2 1603 aa24.92■■□□□ 1.58
CSNK1D-204ENST00000398519 LRRC7Q96NW7 1537 aa24.91■■□□□ 1.58
CSNK1D-204ENST00000398519 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
CSNK1D-204ENST00000398519 YTHDC2Q9H6S0 1430 aaKnown RBP24.89■■□□□ 1.58
CSNK1D-204ENST00000398519 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.58
CSNK1D-204ENST00000398519 KNDC1Q76NI1 1749 aa24.88■■□□□ 1.57
CSNK1D-204ENST00000398519 NBPF1Q3BBV0 1214 aa24.87■■□□□ 1.57
CSNK1D-204ENST00000398519 TECPR2O15040 1411 aa24.87■■□□□ 1.57
CSNK1D-204ENST00000398519 PTCH1Q13635 1447 aa24.87■■□□□ 1.57
CSNK1D-204ENST00000398519 XIRP1Q702N8 1843 aaKnown RBP24.86■■□□□ 1.57
CSNK1D-204ENST00000398519 STK26Q9P289 416 aa24.86■■□□□ 1.57
CSNK1D-204ENST00000398519 ABCC11Q96J66 1382 aa24.85■■□□□ 1.57
CSNK1D-204ENST00000398519 TMEM94Q12767 1356 aa24.85■■□□□ 1.57
CSNK1D-204ENST00000398519 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
CSNK1D-204ENST00000398519 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
CSNK1D-204ENST00000398519 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
CSNK1D-204ENST00000398519 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
CSNK1D-204ENST00000398519 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.57
CSNK1D-204ENST00000398519 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
CSNK1D-204ENST00000398519 IQSEC2Q5JU85 1478 aa24.81■■□□□ 1.56
CSNK1D-204ENST00000398519 DLC1Q96QB1 1528 aa24.8■■□□□ 1.56
CSNK1D-204ENST00000398519 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
CSNK1D-204ENST00000398519 GPRASP1Q5JY77 1395 aa24.78■■□□□ 1.56
CSNK1D-204ENST00000398519 FAM135BQ49AJ0 1406 aa24.77■■□□□ 1.56
CSNK1D-204ENST00000398519 ARHGEF28Q8N1W1 1705 aaKnown RBP24.77■■□□□ 1.56
CSNK1D-204ENST00000398519 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
CSNK1D-204ENST00000398519 PLEKHH1Q9ULM0 1364 aa24.76■■□□□ 1.55
CSNK1D-204ENST00000398519 SIRT1Q96EB6 747 aa24.76■■□□□ 1.55
CSNK1D-204ENST00000398519 NALCNQ8IZF0 1738 aa24.75■■□□□ 1.55
CSNK1D-204ENST00000398519 WAPLQ7Z5K2 1190 aa24.75■■□□□ 1.55
CSNK1D-204ENST00000398519 PRAM1Q96QH2 718 aa24.72■■□□□ 1.55
CSNK1D-204ENST00000398519 ADGRL3Q9HAR2 1447 aa24.72■■□□□ 1.55
CSNK1D-204ENST00000398519 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.71■■□□□ 1.55
CSNK1D-204ENST00000398519 C14orf37Q86TY3 774 aa24.71■■□□□ 1.55
CSNK1D-204ENST00000398519 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
CSNK1D-204ENST00000398519 MSH6P52701 1360 aa24.7■■□□□ 1.55
CSNK1D-204ENST00000398519 POGKQ9P215 609 aa24.68■■□□□ 1.54
CSNK1D-204ENST00000398519 SAFB2Q14151 953 aaKnown RBP eCLIP24.67■■□□□ 1.541e-12■■■■■ 37.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms