RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PKNOX2Q96KN3 472 aa20.99■□□□□ 0.95
CHMP1A-201ENST00000397901 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
CHMP1A-201ENST00000397901 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
CHMP1A-201ENST00000397901 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
CHMP1A-201ENST00000397901 BLMP54132 1417 aaPredicted RBP20.96■□□□□ 0.95
CHMP1A-201ENST00000397901 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
CHMP1A-201ENST00000397901 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
CHMP1A-201ENST00000397901 PRDM15P57071 1507 aaPredicted RBP20.96■□□□□ 0.95
CHMP1A-201ENST00000397901 ATP7AQ04656 1500 aa20.96■□□□□ 0.95
CHMP1A-201ENST00000397901 MS4A1P11836 297 aa20.95■□□□□ 0.94
CHMP1A-201ENST00000397901 TMF1P82094 1093 aa20.95■□□□□ 0.94
CHMP1A-201ENST00000397901 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
CHMP1A-201ENST00000397901 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
CHMP1A-201ENST00000397901 FAM43AQ8N2R8 423 aa20.92■□□□□ 0.94
CHMP1A-201ENST00000397901 SCAPERQ9BY12 1400 aa20.91■□□□□ 0.94
CHMP1A-201ENST00000397901 LAMC1P11047 1609 aa20.91■□□□□ 0.94
CHMP1A-201ENST00000397901 C20orf194Q5TEA3 1177 aa20.9■□□□□ 0.94
CHMP1A-201ENST00000397901 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
CHMP1A-201ENST00000397901 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.93
CHMP1A-201ENST00000397901 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
CHMP1A-201ENST00000397901 EIF2AK4Q9P2K8 1649 aaKnown RBP20.88■□□□□ 0.93
CHMP1A-201ENST00000397901 TRPM2O94759 1503 aa20.88■□□□□ 0.93
CHMP1A-201ENST00000397901 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
CHMP1A-201ENST00000397901 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
CHMP1A-201ENST00000397901 TET3O43151 1660 aa20.87■□□□□ 0.93
CHMP1A-201ENST00000397901 INSRP06213 1382 aa20.87■□□□□ 0.93
CHMP1A-201ENST00000397901 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
CHMP1A-201ENST00000397901 PTPRTO14522 1441 aa20.86■□□□□ 0.93
CHMP1A-201ENST00000397901 GLIPR1L2Q4G1C9 344 aa20.85■□□□□ 0.93
CHMP1A-201ENST00000397901 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
CHMP1A-201ENST00000397901 CEP152O94986 1710 aa20.84■□□□□ 0.93
CHMP1A-201ENST00000397901 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
CHMP1A-201ENST00000397901 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
CHMP1A-201ENST00000397901 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.92
CHMP1A-201ENST00000397901 WDR43Q15061 677 aaKnown RBP eCLIP20.83■□□□□ 0.92
CHMP1A-201ENST00000397901 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
CHMP1A-201ENST00000397901 PLEKHH1Q9ULM0 1364 aa20.82■□□□□ 0.92
CHMP1A-201ENST00000397901 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
CHMP1A-201ENST00000397901 CLTCL1P53675 1640 aa20.81■□□□□ 0.92
CHMP1A-201ENST00000397901 ZNF518AQ6AHZ1 1483 aa20.8■□□□□ 0.92
CHMP1A-201ENST00000397901 KANK1Q14678 1352 aa20.8■□□□□ 0.92
CHMP1A-201ENST00000397901 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
CHMP1A-201ENST00000397901 CFAP74Q9C0B2 1584 aa20.79■□□□□ 0.92
CHMP1A-201ENST00000397901 MADDQ8WXG6 1647 aa20.79■□□□□ 0.92
CHMP1A-201ENST00000397901 KIF3BO15066 747 aa20.79■□□□□ 0.92
CHMP1A-201ENST00000397901 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
CHMP1A-201ENST00000397901 CD109Q6YHK3 1445 aa20.77■□□□□ 0.92
CHMP1A-201ENST00000397901 AMER1Q5JTC6 1135 aaPredicted RBP20.77■□□□□ 0.91
CHMP1A-201ENST00000397901 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
CHMP1A-201ENST00000397901 SLC4A3P48751 1232 aa20.75■□□□□ 0.91
CHMP1A-201ENST00000397901 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
CHMP1A-201ENST00000397901 CCDC146Q8IYE0 955 aa20.74■□□□□ 0.91
CHMP1A-201ENST00000397901 NEURL4Q96JN8 1562 aa20.74■□□□□ 0.91
CHMP1A-201ENST00000397901 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
CHMP1A-201ENST00000397901 ZNF521Q96K83 1311 aa20.73■□□□□ 0.91
CHMP1A-201ENST00000397901 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
CHMP1A-201ENST00000397901 STAC3Q96MF2 364 aa20.71■□□□□ 0.91
CHMP1A-201ENST00000397901 DAXXQ9UER7 740 aaPredicted RBP20.71■□□□□ 0.91
CHMP1A-201ENST00000397901 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
CHMP1A-201ENST00000397901 MLH3Q9UHC1 1453 aa20.71■□□□□ 0.91
CHMP1A-201ENST00000397901 IQGAP1P46940 1657 aa20.7■□□□□ 0.91
CHMP1A-201ENST00000397901 PPRC1Q5VV67 1664 aaKnown RBP20.7■□□□□ 0.9
CHMP1A-201ENST00000397901 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
CHMP1A-201ENST00000397901 FRMPD1Q5SYB0 1578 aa20.69■□□□□ 0.9
CHMP1A-201ENST00000397901 RGS3P49796 1198 aa20.68■□□□□ 0.9
CHMP1A-201ENST00000397901 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
CHMP1A-201ENST00000397901 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
CHMP1A-201ENST00000397901 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
CHMP1A-201ENST00000397901 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
CHMP1A-201ENST00000397901 SCAF11Q99590 1463 aaKnown RBP20.67■□□□□ 0.9
CHMP1A-201ENST00000397901 SYNMO15061 1565 aa20.67■□□□□ 0.9
CHMP1A-201ENST00000397901 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
CHMP1A-201ENST00000397901 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
CHMP1A-201ENST00000397901 UGGT1Q9NYU2 1555 aa20.66■□□□□ 0.9
CHMP1A-201ENST00000397901 C8orf34Q49A92 452 aa20.66■□□□□ 0.9
CHMP1A-201ENST00000397901 APAF1O14727 1248 aa20.66■□□□□ 0.9
CHMP1A-201ENST00000397901 KIAA1210Q9ULL0 1709 aa20.65■□□□□ 0.9
CHMP1A-201ENST00000397901 NEO1Q92859 1461 aa20.65■□□□□ 0.9
CHMP1A-201ENST00000397901 PIK3C2GO75747 1445 aa20.64■□□□□ 0.9
CHMP1A-201ENST00000397901 KIF1BO60333 1816 aa20.64■□□□□ 0.9
CHMP1A-201ENST00000397901 ZMYND15Q9H091 742 aa20.64■□□□□ 0.89
CHMP1A-201ENST00000397901 ABCA6Q8N139 1617 aa20.63■□□□□ 0.89
CHMP1A-201ENST00000397901 BCAR3O75815 825 aa20.63■□□□□ 0.89
CHMP1A-201ENST00000397901 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
CHMP1A-201ENST00000397901 MYOM2P54296 1465 aa20.61■□□□□ 0.89
CHMP1A-201ENST00000397901 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
CHMP1A-201ENST00000397901 MAP3K4Q9Y6R4 1608 aa20.61■□□□□ 0.89
CHMP1A-201ENST00000397901 MROH2AA6NES4 1674 aa20.6■□□□□ 0.89
CHMP1A-201ENST00000397901 MYOM1P52179 1685 aa20.6■□□□□ 0.89
CHMP1A-201ENST00000397901 FRAT2O75474 233 aaPredicted RBP20.6■□□□□ 0.89
CHMP1A-201ENST00000397901 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
CHMP1A-201ENST00000397901 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
CHMP1A-201ENST00000397901 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
CHMP1A-201ENST00000397901 EIF3AQ14152 1382 aaKnown RBP20.58■□□□□ 0.89
CHMP1A-201ENST00000397901 NPC1L1Q9UHC9 1359 aa20.56■□□□□ 0.88
CHMP1A-201ENST00000397901 NPATQ14207 1427 aa20.56■□□□□ 0.88
CHMP1A-201ENST00000397901 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
CHMP1A-201ENST00000397901 CFAP70Q5T0N1 1121 aa20.56■□□□□ 0.88
CHMP1A-201ENST00000397901 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
CHMP1A-201ENST00000397901 NRXN1Q9ULB1 1477 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms