RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CCDC144AA2RUR9 1427 aa31.27■■■□□ 2.6
TSPAN4-206ENST00000397408 PPP1R15AO75807 674 aaPredicted RBP31.21■■■□□ 2.59
TSPAN4-206ENST00000397408 ZNF326Q5BKZ1 582 aaKnown RBP31.21■■■□□ 2.59
TSPAN4-206ENST00000397408 HDGFP51858 240 aaKnown RBP31.19■■■□□ 2.58
TSPAN4-206ENST00000397408 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.18■■■□□ 2.58
TSPAN4-206ENST00000397408 NUTM2DQ5VT03 806 aaPredicted RBP31.17■■■□□ 2.58
TSPAN4-206ENST00000397408 ZNF335Q9H4Z2 1342 aaPredicted RBP31.17■■■□□ 2.58
TSPAN4-206ENST00000397408 ANKRD30BQ9BXX2 1392 aa31.15■■■□□ 2.58
TSPAN4-206ENST00000397408 NEXMIFQ5QGS0 1516 aa31.15■■■□□ 2.58
TSPAN4-206ENST00000397408 PLEKHG1Q9ULL1 1385 aa31.15■■■□□ 2.58
TSPAN4-206ENST00000397408 SENP3Q9H4L4 574 aaPredicted RBP31.13■■■□□ 2.57
TSPAN4-206ENST00000397408 LTBP4Q8N2S1 1624 aa31.12■■■□□ 2.57
TSPAN4-206ENST00000397408 BCANQ96GW7 911 aa31.12■■■□□ 2.57
TSPAN4-206ENST00000397408 SPATA31E1Q6ZUB1 1445 aa31.11■■■□□ 2.57
TSPAN4-206ENST00000397408 SLC26A8Q96RN1 970 aa31.07■■■□□ 2.57
TSPAN4-206ENST00000397408 RGL3Q3MIN7 710 aa31.05■■■□□ 2.56
TSPAN4-206ENST00000397408 RPGRIP1LQ68CZ1 1315 aa31.05■■■□□ 2.56
TSPAN4-206ENST00000397408 PPLO60437 1756 aa31.04■■■□□ 2.56
TSPAN4-206ENST00000397408 CERKQ8TCT0 537 aa31.02■■■□□ 2.56
TSPAN4-206ENST00000397408 ADAMTS13Q76LX8 1427 aa31.01■■■□□ 2.56
TSPAN4-206ENST00000397408 PCGF6Q9BYE7 350 aa31■■■□□ 2.55
TSPAN4-206ENST00000397408 DIP2AQ14689 1571 aa31■■■□□ 2.55
TSPAN4-206ENST00000397408 SETBP1Q9Y6X0 1596 aa31■■■□□ 2.55
TSPAN4-206ENST00000397408 CPS1P31327 1500 aa31■■■□□ 2.55
TSPAN4-206ENST00000397408 NRXN3Q9Y4C0 1643 aa30.99■■■□□ 2.55
TSPAN4-206ENST00000397408 STRCP1A6NGW2 1772 aa30.99■■■□□ 2.55
TSPAN4-206ENST00000397408 DHX57Q6P158 1386 aaKnown RBP30.99■■■□□ 2.55
TSPAN4-206ENST00000397408 IFT172Q9UG01 1749 aa30.98■■■□□ 2.55
TSPAN4-206ENST00000397408 VGFO15240 615 aaPredicted RBP30.98■■■□□ 2.55
TSPAN4-206ENST00000397408 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
TSPAN4-206ENST00000397408 NWD1Q149M9 1564 aa30.91■■■□□ 2.54
TSPAN4-206ENST00000397408 KCNA6P17658 529 aa30.9■■■□□ 2.54
TSPAN4-206ENST00000397408 ADGRF5Q8IZF2 1346 aa30.89■■■□□ 2.54
TSPAN4-206ENST00000397408 IQSEC2Q5JU85 1478 aa30.89■■■□□ 2.54
TSPAN4-206ENST00000397408 CHD2O14647 1828 aaKnown RBP30.87■■■□□ 2.53
TSPAN4-206ENST00000397408 PIK3R4Q99570 1358 aa30.87■■■□□ 2.53
TSPAN4-206ENST00000397408 LRRC7Q96NW7 1537 aa30.86■■■□□ 2.53
TSPAN4-206ENST00000397408 MYOM2P54296 1465 aa30.86■■■□□ 2.53
TSPAN4-206ENST00000397408 NKTRP30414 1462 aaKnown RBP30.85■■■□□ 2.53
TSPAN4-206ENST00000397408 ALKQ9UM73 1620 aa30.84■■■□□ 2.53
TSPAN4-206ENST00000397408 METP08581 1390 aa30.84■■■□□ 2.53
TSPAN4-206ENST00000397408 SETD1AO15047 1707 aaKnown RBP30.84■■■□□ 2.53
TSPAN4-206ENST00000397408 PIK3C2GO75747 1445 aa30.82■■■□□ 2.52
TSPAN4-206ENST00000397408 PTPRUQ92729 1446 aa30.81■■■□□ 2.52
TSPAN4-206ENST00000397408 NRXN1Q9ULB1 1477 aa30.81■■■□□ 2.52
TSPAN4-206ENST00000397408 SIN3AQ96ST3 1273 aa30.79■■■□□ 2.52
TSPAN4-206ENST00000397408 DCAF11Q8TEB1 546 aa30.78■■■□□ 2.52
TSPAN4-206ENST00000397408 XRN1Q8IZH2 1706 aaKnown RBP30.77■■■□□ 2.52
TSPAN4-206ENST00000397408 PROSER2Q86WR7 435 aaPredicted RBP30.76■■■□□ 2.51
TSPAN4-206ENST00000397408 AMOTL2Q9Y2J4 779 aa30.76■■■□□ 2.51
TSPAN4-206ENST00000397408 KDM2AQ9Y2K7 1162 aa30.76■■■□□ 2.51
TSPAN4-206ENST00000397408 TMEM94Q12767 1356 aa30.76■■■□□ 2.51
TSPAN4-206ENST00000397408 XIRP1Q702N8 1843 aaKnown RBP30.75■■■□□ 2.51
TSPAN4-206ENST00000397408 FBXO41Q8TF61 875 aa30.75■■■□□ 2.51
TSPAN4-206ENST00000397408 NEUROD1Q13562 356 aa30.73■■■□□ 2.51
TSPAN4-206ENST00000397408 RBM33Q96EV2 1170 aaKnown RBP30.73■■■□□ 2.51
TSPAN4-206ENST00000397408 LAMC1P11047 1609 aa30.71■■■□□ 2.51
TSPAN4-206ENST00000397408 ASXL1Q8IXJ9 1541 aa30.7■■■□□ 2.51
TSPAN4-206ENST00000397408 STAC3Q96MF2 364 aa30.7■■■□□ 2.5
TSPAN4-206ENST00000397408 UBAP1LF5GYI3 381 aa30.67■■■□□ 2.5
TSPAN4-206ENST00000397408 CFAP70Q5T0N1 1121 aa30.66■■■□□ 2.5
TSPAN4-206ENST00000397408 C14orf93Q9H972 538 aaKnown RBP30.66■■■□□ 2.5
TSPAN4-206ENST00000397408 ILDR1Q86SU0 546 aaPredicted RBP30.64■■■□□ 2.5
TSPAN4-206ENST00000397408 PTCH1Q13635 1447 aa30.63■■■□□ 2.49
TSPAN4-206ENST00000397408 PRAG1Q86YV5 1406 aa30.63■■■□□ 2.49
TSPAN4-206ENST00000397408 TMEM132EQ6IEE7 984 aa30.63■■■□□ 2.49
TSPAN4-206ENST00000397408 L3MBTL2Q969R5 705 aa30.63■■■□□ 2.49
TSPAN4-206ENST00000397408 NCOA3Q9Y6Q9 1424 aa30.61■■■□□ 2.49
TSPAN4-206ENST00000397408 LRPPRCP42704 1394 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-206ENST00000397408 TOM1O60784 492 aa30.6■■■□□ 2.49
TSPAN4-206ENST00000397408 C14orf37Q86TY3 774 aa30.6■■■□□ 2.49
TSPAN4-206ENST00000397408 MSH6P52701 1360 aa30.6■■■□□ 2.49
TSPAN4-206ENST00000397408 ROBO2Q9HCK4 1378 aa30.59■■■□□ 2.49
TSPAN4-206ENST00000397408 STK26Q9P289 416 aa30.58■■■□□ 2.49
TSPAN4-206ENST00000397408 YTHDC2Q9H6S0 1430 aaKnown RBP30.58■■■□□ 2.49
TSPAN4-206ENST00000397408 KNDC1Q76NI1 1749 aa30.57■■■□□ 2.48
TSPAN4-206ENST00000397408 ADGRB1O14514 1584 aa30.57■■■□□ 2.48
TSPAN4-206ENST00000397408 TECPR2O15040 1411 aa30.57■■■□□ 2.48
TSPAN4-206ENST00000397408 TONSLQ96HA7 1378 aa30.55■■■□□ 2.48
TSPAN4-206ENST00000397408 ABCC11Q96J66 1382 aa30.54■■■□□ 2.48
TSPAN4-206ENST00000397408 SCAF1Q9H7N4 1312 aaKnown RBP30.52■■■□□ 2.48
TSPAN4-206ENST00000397408 PIP4K2BP78356 416 aa30.52■■■□□ 2.48
TSPAN4-206ENST00000397408 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.48
TSPAN4-206ENST00000397408 KIAA1210Q9ULL0 1709 aa30.51■■■□□ 2.47
TSPAN4-206ENST00000397408 ADGRL3Q9HAR2 1447 aa30.5■■■□□ 2.47
TSPAN4-206ENST00000397408 NALCNQ8IZF0 1738 aa30.5■■■□□ 2.47
TSPAN4-206ENST00000397408 C19orf44Q9H6X5 657 aa30.49■■■□□ 2.47
TSPAN4-206ENST00000397408 CLSPNQ9HAW4 1339 aa30.49■■■□□ 2.47
TSPAN4-206ENST00000397408 DCCP43146 1447 aa30.46■■■□□ 2.47
TSPAN4-206ENST00000397408 CCER1Q8TC90 406 aaPredicted RBP30.46■■■□□ 2.47
TSPAN4-206ENST00000397408 WAPLQ7Z5K2 1190 aa30.45■■■□□ 2.46
TSPAN4-206ENST00000397408 FAM135BQ49AJ0 1406 aa30.45■■■□□ 2.46
TSPAN4-206ENST00000397408 PLEKHH1Q9ULM0 1364 aa30.44■■■□□ 2.46
TSPAN4-206ENST00000397408 ATF3P18847 181 aa30.44■■■□□ 2.46
TSPAN4-206ENST00000397408 DLC1Q96QB1 1528 aa30.44■■■□□ 2.46
TSPAN4-206ENST00000397408 CADPS2Q86UW7 1296 aa30.43■■■□□ 2.46
TSPAN4-206ENST00000397408 TRAK1Q9UPV9 953 aa30.41■■■□□ 2.46
TSPAN4-206ENST00000397408 NBPF1Q3BBV0 1214 aa30.4■■■□□ 2.46
TSPAN4-206ENST00000397408 SIRT1Q96EB6 747 aa30.4■■■□□ 2.46
TSPAN4-206ENST00000397408 TRPM1Q7Z4N2 1603 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms